RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 IPO8O15397 1037 aaKnown RBP21.5■■□□□ 1.03
HLA-A-202ENST00000376806 TWISTNBQ3B726 338 aaPredicted RBP21.5■■□□□ 1.03
HLA-A-202ENST00000376806 KRT28Q7Z3Y7 464 aa21.5■■□□□ 1.03
HLA-A-202ENST00000376806 SKAP1Q86WV1 359 aa21.5■■□□□ 1.03
HLA-A-202ENST00000376806 RGPD5Q99666 1765 aa21.49■■□□□ 1.03
HLA-A-202ENST00000376806 C8orf58Q8NAV2 365 aa21.49■■□□□ 1.03
HLA-A-202ENST00000376806 DDX17Q92841 729 aaKnown RBP21.49■■□□□ 1.03
HLA-A-202ENST00000376806 MED1Q15648 1581 aaPredicted RBP21.49■■□□□ 1.03
HLA-A-202ENST00000376806 IGHDP01880 384 aa21.48■■□□□ 1.03
HLA-A-202ENST00000376806 BRINP3Q76B58 766 aa21.48■■□□□ 1.03
HLA-A-202ENST00000376806 MRPL50Q8N5N7 158 aaKnown RBP21.48■■□□□ 1.03
HLA-A-202ENST00000376806 CHL1O00533 1208 aa21.47■■□□□ 1.03
HLA-A-202ENST00000376806 RTF1Q92541 710 aaKnown RBP21.47■■□□□ 1.03
HLA-A-202ENST00000376806 CRYBG1Q9Y4K1 1723 aa21.47■■□□□ 1.03
HLA-A-202ENST00000376806 KIAA0232Q92628 1395 aa21.46■■□□□ 1.03
HLA-A-202ENST00000376806 GCP02774 474 aa21.46■■□□□ 1.03
HLA-A-202ENST00000376806 VIRMAQ69YN4 1812 aaKnown RBP21.45■■□□□ 1.03
HLA-A-202ENST00000376806 ELL2O00472 640 aaPredicted RBP21.45■■□□□ 1.02
HLA-A-202ENST00000376806 LMOD2Q6P5Q4 547 aa21.45■■□□□ 1.02
HLA-A-202ENST00000376806 DDX19BQ9UMR2 479 aa21.45■■□□□ 1.02
HLA-A-202ENST00000376806 PCDHB15Q9Y5E8 787 aa21.45■■□□□ 1.02
HLA-A-202ENST00000376806 LMO7Q8WWI1 1683 aa21.45■■□□□ 1.02
HLA-A-202ENST00000376806 ZBTB7CA1YPR0 619 aa21.45■■□□□ 1.02
HLA-A-202ENST00000376806 ARHGEF25Q86VW2 580 aa21.45■■□□□ 1.02
HLA-A-202ENST00000376806 ITPRIPQ8IWB1 547 aa21.45■■□□□ 1.02
HLA-A-202ENST00000376806 TMEM57Q8N5G2 664 aa21.45■■□□□ 1.02
HLA-A-202ENST00000376806 MAP3K5Q99683 1374 aa21.44■■□□□ 1.02
HLA-A-202ENST00000376806 NCAPD2Q15021 1401 aa21.44■■□□□ 1.02
HLA-A-202ENST00000376806 HTATSF1O43719 755 aaKnown RBP21.44■■□□□ 1.02
HLA-A-202ENST00000376806 USHBP1Q8N6Y0 703 aa21.44■■□□□ 1.02
HLA-A-202ENST00000376806 UBAP1LF5GYI3 381 aa21.43■■□□□ 1.02
HLA-A-202ENST00000376806 ARHGAP45Q92619 1136 aa21.43■■□□□ 1.02
HLA-A-202ENST00000376806 PXDNQ92626 1479 aa21.43■■□□□ 1.02
HLA-A-202ENST00000376806 FAM208AQ9UK61 1670 aaKnown RBP21.42■■□□□ 1.02
HLA-A-202ENST00000376806 GNAT3A8MTJ3 354 aa21.41■■□□□ 1.02
HLA-A-202ENST00000376806 HAP1P54257 671 aaPredicted RBP21.41■■□□□ 1.02
HLA-A-202ENST00000376806 TNS3Q68CZ2 1445 aa21.41■■□□□ 1.02
HLA-A-202ENST00000376806 TOM1O60784 492 aa21.41■■□□□ 1.02
HLA-A-202ENST00000376806 PDE4AP27815 886 aa21.41■■□□□ 1.02
HLA-A-202ENST00000376806 PIP4K2BP78356 416 aa21.41■■□□□ 1.02
HLA-A-202ENST00000376806 NBPF6Q5VWK0 638 aa21.41■■□□□ 1.02
HLA-A-202ENST00000376806 NBPF4Q96M43 638 aa21.41■■□□□ 1.02
HLA-A-202ENST00000376806 NPHP3Q7Z494 1330 aa21.4■■□□□ 1.02
HLA-A-202ENST00000376806 COL18A1P39060 1754 aa21.39■■□□□ 1.02
HLA-A-202ENST00000376806 PLEKHG5O94827 1062 aa21.39■■□□□ 1.02
HLA-A-202ENST00000376806 KRT24Q2M2I5 525 aa21.39■■□□□ 1.02
HLA-A-202ENST00000376806 BACH2Q9BYV9 841 aa21.39■■□□□ 1.02
HLA-A-202ENST00000376806 ABCC4O15439 1325 aa21.39■■□□□ 1.01
HLA-A-202ENST00000376806 RWDD1Q9H446 243 aaPredicted RBP21.38■■□□□ 1.01
HLA-A-202ENST00000376806 TSPYL4Q9UJ04 414 aa21.38■■□□□ 1.01
HLA-A-202ENST00000376806 LRRC59Q96AG4 307 aaKnown RBP21.37■■□□□ 1.01
HLA-A-202ENST00000376806 ROBO1Q9Y6N7 1651 aa21.37■■□□□ 1.01
HLA-A-202ENST00000376806 KDM3BQ7LBC6 1761 aa21.37■■□□□ 1.01
HLA-A-202ENST00000376806 RGS3P49796 1198 aa21.37■■□□□ 1.01
HLA-A-202ENST00000376806 ABCC6O95255 1503 aa21.37■■□□□ 1.01
HLA-A-202ENST00000376806 ANKRD24Q8TF21 1146 aa21.36■■□□□ 1.01
HLA-A-202ENST00000376806 ZBTB40Q9NUA8 1239 aa21.36■■□□□ 1.01
HLA-A-202ENST00000376806 CACNA1FO60840 1977 aa21.36■■□□□ 1.01
HLA-A-202ENST00000376806 API5Q9BZZ5 524 aaKnown RBP21.35■■□□□ 1.01
HLA-A-202ENST00000376806 MIS18AQ9NYP9 233 aa21.35■■□□□ 1.01
HLA-A-202ENST00000376806 RGS12O14924 1447 aa21.34■■□□□ 1.01
HLA-A-202ENST00000376806 IL17REQ8NFR9 667 aa21.33■■□□□ 1.01
HLA-A-202ENST00000376806 CEMIPQ8WUJ3 1361 aa21.33■■□□□ 1
HLA-A-202ENST00000376806 HDAC1Q13547 482 aaPredicted RBP21.32■■□□□ 1
HLA-A-202ENST00000376806 AXIN2Q9Y2T1 843 aa21.32■■□□□ 1
HLA-A-202ENST00000376806 SOS2Q07890 1332 aaPredicted RBP21.31■■□□□ 1
HLA-A-202ENST00000376806 CHMP4BQ9H444 224 aaKnown RBP21.31■■□□□ 1
HLA-A-202ENST00000376806 BABAM1Q9NWV8 329 aa21.31■■□□□ 1
HLA-A-202ENST00000376806 ERBB3P21860 1342 aa21.31■■□□□ 1
HLA-A-202ENST00000376806 SPATA31A3Q5VYP0 1347 aa21.31■■□□□ 1
HLA-A-202ENST00000376806 ZC3H6P61129 1189 aaKnown RBP21.3■■□□□ 1
HLA-A-202ENST00000376806 SIPA1L3O60292 1781 aaPredicted RBP21.3■■□□□ 1
HLA-A-202ENST00000376806 ABCA3Q99758 1704 aa21.3■■□□□ 1
HLA-A-202ENST00000376806 ADAMTS7Q9UKP4 1686 aa21.3■■□□□ 1
HLA-A-202ENST00000376806 N4BP2Q86UW6 1770 aaPredicted RBP21.3■■□□□ 1
HLA-A-202ENST00000376806 PDZRN3Q9UPQ7 1066 aa21.29■■□□□ 1
HLA-A-202ENST00000376806 NHSL1Q5SYE7 1610 aa21.29■■□□□ 1
HLA-A-202ENST00000376806 PTPRCP08575 1304 aa21.29■■□□□ 1
HLA-A-202ENST00000376806 ZBTB7BO15156 539 aaPredicted RBP21.28■■□□□ 1
HLA-A-202ENST00000376806 TAF7Q15545 349 aaPredicted RBP21.28■■□□□ 1
HLA-A-202ENST00000376806 FAM161AQ3B820 660 aa21.28■■□□□ 1
HLA-A-202ENST00000376806 PLEKHO1Q53GL0 409 aaPredicted RBP21.28■■□□□ 1
HLA-A-202ENST00000376806 OVOS2A0A0G2JMS6 1433 aa21.28■■□□□ 1
HLA-A-202ENST00000376806 ANP32AP39687 249 aaKnown RBP21.28■■□□□ 1
HLA-A-202ENST00000376806 AMOTQ4VCS5 1084 aa21.28■■□□□ 1
HLA-A-202ENST00000376806 ZNF530Q6P9A1 599 aaPredicted RBP21.28■■□□□ 1
HLA-A-202ENST00000376806 C8orf34Q49A92 452 aa21.27■■□□□ 1
HLA-A-202ENST00000376806 SOS1Q07889 1333 aaPredicted RBP21.27■□□□□ 0.99
HLA-A-202ENST00000376806 AKAP4Q5JQC9 854 aa21.26■□□□□ 0.99
HLA-A-202ENST00000376806 MSH5O43196 834 aa21.26■□□□□ 0.99
HLA-A-202ENST00000376806 AHDC1Q5TGY3 1603 aaPredicted RBP21.25■□□□□ 0.99
HLA-A-202ENST00000376806 INTS3Q68E01 1043 aaKnown RBP21.24■□□□□ 0.99
HLA-A-202ENST00000376806 CABLES1Q8TDN4 633 aa21.24■□□□□ 0.99
HLA-A-202ENST00000376806 CPDO75976 1380 aa21.24■□□□□ 0.99
HLA-A-202ENST00000376806 SCN11AQ9UI33 1791 aa21.24■□□□□ 0.99
HLA-A-202ENST00000376806 SMC5Q8IY18 1101 aa21.24■□□□□ 0.99
HLA-A-202ENST00000376806 PKD1L3Q7Z443 1732 aa21.24■□□□□ 0.99
HLA-A-202ENST00000376806 SLC4A2P04920 1241 aa21.23■□□□□ 0.99
HLA-A-202ENST00000376806 LGR6Q9HBX8 967 aa21.22■□□□□ 0.99
HLA-A-202ENST00000376806 C1orf141Q5JVX7 400 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms