RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 AEBP1Q8IUX7 1158 aa13.31□□□□□ -0.28
ABCF1-202ENST00000376545 ANKRD44Q8N8A2 993 aa13.31□□□□□ -0.28
ABCF1-202ENST00000376545 LRRC37A3O60309 1634 aa13.31□□□□□ -0.28
ABCF1-202ENST00000376545 PTPRCP08575 1304 aa13.31□□□□□ -0.28
ABCF1-202ENST00000376545 ACEP12821 1306 aa13.31□□□□□ -0.28
ABCF1-202ENST00000376545 TRAK2O60296 914 aa13.3□□□□□ -0.28
ABCF1-202ENST00000376545 USP54Q70EL1 1684 aa13.3□□□□□ -0.28
ABCF1-202ENST00000376545 DDX11L8A8MPP1 907 aa13.3□□□□□ -0.28
ABCF1-202ENST00000376545 RAB3GAP1Q15042 981 aa13.3□□□□□ -0.28
ABCF1-202ENST00000376545 ARHGEF10O15013 1369 aa13.3□□□□□ -0.28
ABCF1-202ENST00000376545 CDC45O75419 566 aa13.3□□□□□ -0.28
ABCF1-202ENST00000376545 SULT6B1Q6IMI4 303 aa13.3□□□□□ -0.28
ABCF1-202ENST00000376545 RPAP2Q8IXW5 612 aaPredicted RBP13.3□□□□□ -0.28
ABCF1-202ENST00000376545 N4BP2Q86UW6 1770 aaPredicted RBP13.3□□□□□ -0.28
ABCF1-202ENST00000376545 TUBGCP6Q96RT7 1819 aa13.29□□□□□ -0.28
ABCF1-202ENST00000376545 PTPRUQ92729 1446 aa13.29□□□□□ -0.28
ABCF1-202ENST00000376545 RTL1A6NKG5 1358 aa13.29□□□□□ -0.28
ABCF1-202ENST00000376545 CD2BP2O95400 341 aaKnown RBP13.28□□□□□ -0.28
ABCF1-202ENST00000376545 XRCC6P12956 609 aaKnown RBP eCLIP13.28□□□□□ -0.282e-6■□□□□ 9.4
ABCF1-202ENST00000376545 CLEC17AQ6ZS10 378 aa13.28□□□□□ -0.28
ABCF1-202ENST00000376545 KDRP35968 1356 aa13.28□□□□□ -0.28
ABCF1-202ENST00000376545 TTC22Q5TAA0 569 aa13.28□□□□□ -0.28
ABCF1-202ENST00000376545 MARF1Q9Y4F3 1742 aaKnown RBP13.28□□□□□ -0.28
ABCF1-202ENST00000376545 CEP85Q6P2H3 762 aa13.28□□□□□ -0.28
ABCF1-202ENST00000376545 SLIT1O75093 1534 aa13.28□□□□□ -0.28
ABCF1-202ENST00000376545 K7ELQ4 463 aaPredicted RBP13.27□□□□□ -0.28
ABCF1-202ENST00000376545 TNPO1Q92973 898 aaKnown RBP13.27□□□□□ -0.28
ABCF1-202ENST00000376545 GOLGA6L3A6NEY3 463 aa13.27□□□□□ -0.29
ABCF1-202ENST00000376545 ISY1Q9ULR0 285 aaKnown RBP13.27□□□□□ -0.29
ABCF1-202ENST00000376545 ARHGAP23Q9P227 1491 aa13.27□□□□□ -0.29
ABCF1-202ENST00000376545 PIK3C2AO00443 1686 aa13.27□□□□□ -0.29
ABCF1-202ENST00000376545 RGPD8O14715 1765 aaPredicted RBP13.26□□□□□ -0.29
ABCF1-202ENST00000376545 MSH6P52701 1360 aa13.26□□□□□ -0.29
ABCF1-202ENST00000376545 TTC21AQ8NDW8 1320 aa13.26□□□□□ -0.29
ABCF1-202ENST00000376545 KRT24Q2M2I5 525 aa13.26□□□□□ -0.29
ABCF1-202ENST00000376545 HSP90AB2PQ58FF8 381 aa13.26□□□□□ -0.29
ABCF1-202ENST00000376545 LTKP29376 864 aa13.26□□□□□ -0.29
ABCF1-202ENST00000376545 FAM208AQ9UK61 1670 aaKnown RBP13.26□□□□□ -0.29
ABCF1-202ENST00000376545 XRN1Q8IZH2 1706 aaKnown RBP13.25□□□□□ -0.29
ABCF1-202ENST00000376545 MCM10Q7L590 875 aa13.25□□□□□ -0.29
ABCF1-202ENST00000376545 CACNA1FO60840 1977 aa13.25□□□□□ -0.29
ABCF1-202ENST00000376545 HSP90AB1P08238 724 aaKnown RBP13.25□□□□□ -0.29
ABCF1-202ENST00000376545 ESF1Q9H501 851 aaKnown RBP13.25□□□□□ -0.29
ABCF1-202ENST00000376545 SBNO1A3KN83 1393 aa13.25□□□□□ -0.29
ABCF1-202ENST00000376545 DIP2AQ14689 1571 aa13.24□□□□□ -0.29
ABCF1-202ENST00000376545 USP26Q9BXU7 913 aa13.24□□□□□ -0.29
ABCF1-202ENST00000376545 PTMSP20962 102 aa13.24□□□□□ -0.29
ABCF1-202ENST00000376545 RBM42Q9BTD8 480 aaKnown RBP13.24□□□□□ -0.29
ABCF1-202ENST00000376545 MAP3K19Q56UN5 1328 aa13.23□□□□□ -0.29
ABCF1-202ENST00000376545 MRE11P49959 708 aa13.23□□□□□ -0.29
ABCF1-202ENST00000376545 C16orf71Q8IYS4 520 aaPredicted RBP13.23□□□□□ -0.29
ABCF1-202ENST00000376545 CEP170BQ9Y4F5 1589 aaPredicted RBP13.23□□□□□ -0.29
ABCF1-202ENST00000376545 FLT4P35916 1363 aa13.23□□□□□ -0.29
ABCF1-202ENST00000376545 RABEP1Q15276 862 aa13.23□□□□□ -0.29
ABCF1-202ENST00000376545 GBP4Q96PP9 640 aa13.23□□□□□ -0.29
ABCF1-202ENST00000376545 OSBPL3Q9H4L5 887 aa13.23□□□□□ -0.29
ABCF1-202ENST00000376545 NWD1Q149M9 1564 aa13.22□□□□□ -0.29
ABCF1-202ENST00000376545 IGSF1Q8N6C5 1336 aa13.22□□□□□ -0.29
ABCF1-202ENST00000376545 SKOR2Q2VWA4 1001 aaPredicted RBP13.22□□□□□ -0.29
ABCF1-202ENST00000376545 GAS2L2Q8NHY3 880 aa13.22□□□□□ -0.29
ABCF1-202ENST00000376545 MEIS3Q99687 375 aa13.22□□□□□ -0.29
ABCF1-202ENST00000376545 HTATSF1O43719 755 aaKnown RBP13.21□□□□□ -0.29
ABCF1-202ENST00000376545 MTHFSDQ2M296 383 aaKnown RBP13.21□□□□□ -0.29
ABCF1-202ENST00000376545 SDSP20132 328 aa13.21□□□□□ -0.3
ABCF1-202ENST00000376545 OTUD7AQ8TE49 926 aaPredicted RBP13.21□□□□□ -0.3
ABCF1-202ENST00000376545 SLC4A2P04920 1241 aa13.2□□□□□ -0.3
ABCF1-202ENST00000376545 GZF1Q9H116 711 aaPredicted RBP13.2□□□□□ -0.3
ABCF1-202ENST00000376545 PODXL2Q9NZ53 605 aa13.2□□□□□ -0.3
ABCF1-202ENST00000376545 RRAGDQ9NQL2 400 aaPredicted RBP13.2□□□□□ -0.3
ABCF1-202ENST00000376545 SALL3Q9BXA9 1300 aa13.2□□□□□ -0.3
ABCF1-202ENST00000376545 CYP2E1P05181 493 aaPredicted RBP13.19□□□□□ -0.3
ABCF1-202ENST00000376545 CCT4P50991 539 aaKnown RBP13.19□□□□□ -0.3
ABCF1-202ENST00000376545 TBX22Q9Y458 520 aa13.19□□□□□ -0.3
ABCF1-202ENST00000376545 PANK2Q9BZ23 570 aa13.19□□□□□ -0.3
ABCF1-202ENST00000376545 GRPEL1Q9HAV7 217 aa13.19□□□□□ -0.3
ABCF1-202ENST00000376545 IBTKQ9P2D0 1353 aaPredicted RBP13.18□□□□□ -0.3
ABCF1-202ENST00000376545 SOS1Q07889 1333 aaPredicted RBP13.18□□□□□ -0.3
ABCF1-202ENST00000376545 FOXO3O43524 673 aa13.18□□□□□ -0.3
ABCF1-202ENST00000376545 ANKARQ7Z5J8 1434 aa13.18□□□□□ -0.3
ABCF1-202ENST00000376545 G2E3Q7L622 706 aa13.18□□□□□ -0.3
ABCF1-202ENST00000376545 EYA1Q99502 592 aa13.18□□□□□ -0.3
ABCF1-202ENST00000376545 PXDNLA1KZ92 1463 aa13.18□□□□□ -0.3
ABCF1-202ENST00000376545 AK9Q5TCS8 1911 aa13.17□□□□□ -0.3
ABCF1-202ENST00000376545 HMMRO75330 724 aa13.17□□□□□ -0.3
ABCF1-202ENST00000376545 AMOTL2Q9Y2J4 779 aa13.17□□□□□ -0.3
ABCF1-202ENST00000376545 SMARCA5O60264 1052 aaPredicted RBP13.17□□□□□ -0.3
ABCF1-202ENST00000376545 SSFA2P28290 1259 aa13.17□□□□□ -0.3
ABCF1-202ENST00000376545 BABAM1Q9NWV8 329 aa13.17□□□□□ -0.3
ABCF1-202ENST00000376545 TSPYL4Q9UJ04 414 aa13.17□□□□□ -0.3
ABCF1-202ENST00000376545 GAS2L3Q86XJ1 694 aa13.16□□□□□ -0.3
ABCF1-202ENST00000376545 MIS18AQ9NYP9 233 aa13.16□□□□□ -0.3
ABCF1-202ENST00000376545 PDE1AP54750 535 aa13.15□□□□□ -0.3
ABCF1-202ENST00000376545 RTF1Q92541 710 aaKnown RBP13.15□□□□□ -0.3
ABCF1-202ENST00000376545 IL17RAQ96F46 866 aa13.15□□□□□ -0.3
ABCF1-202ENST00000376545 BAG4O95429 457 aaKnown RBP13.15□□□□□ -0.3
ABCF1-202ENST00000376545 HSP90AA1P07900 732 aaKnown RBP13.15□□□□□ -0.3
ABCF1-202ENST00000376545 CASC1Q6TDU7 716 aa13.15□□□□□ -0.3
ABCF1-202ENST00000376545 CWC22Q9HCG8 908 aaKnown RBP13.15□□□□□ -0.3
ABCF1-202ENST00000376545 SLC26A8Q96RN1 970 aa13.15□□□□□ -0.31
ABCF1-202ENST00000376545 MED1Q15648 1581 aaPredicted RBP13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms