RNA–Protein interactions for RNA: ENST00000375784.7

CLIC1-208, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-208ENST00000375784 IL2RBP14784 551 aa22.85■■□□□ 1.25
CLIC1-208ENST00000375784 LRRC4BQ9NT99 713 aa22.85■■□□□ 1.25
CLIC1-208ENST00000375784 ERBB3P21860 1342 aa22.84■■□□□ 1.25
CLIC1-208ENST00000375784 IP6K1Q92551 441 aa22.84■■□□□ 1.25
CLIC1-208ENST00000375784 PANK3Q9H999 370 aa22.84■■□□□ 1.25
CLIC1-208ENST00000375784 AMPHP49418 695 aa22.83■■□□□ 1.25
CLIC1-208ENST00000375784 SLC16A10Q8TF71 515 aa22.82■■□□□ 1.24
CLIC1-208ENST00000375784 AKT1S1Q96B36 256 aa22.82■■□□□ 1.24
CLIC1-208ENST00000375784 MAP3K19Q56UN5 1328 aa22.82■■□□□ 1.24
CLIC1-208ENST00000375784 FBLN1P23142 703 aa22.81■■□□□ 1.24
CLIC1-208ENST00000375784 ANKRD24Q8TF21 1146 aa22.81■■□□□ 1.24
CLIC1-208ENST00000375784 KIF7Q2M1P5 1343 aa22.8■■□□□ 1.24
CLIC1-208ENST00000375784 GIGYF1O75420 1035 aaPredicted RBP22.79■■□□□ 1.24
CLIC1-208ENST00000375784 POLD1P28340 1107 aa22.79■■□□□ 1.24
CLIC1-208ENST00000375784 BTAF1O14981 1849 aa22.79■■□□□ 1.24
CLIC1-208ENST00000375784 HOXC9P31274 260 aa22.78■■□□□ 1.24
CLIC1-208ENST00000375784 RRS1Q15050 365 aaKnown RBP22.78■■□□□ 1.24
CLIC1-208ENST00000375784 SLC27A3Q5K4L6 730 aa22.78■■□□□ 1.24
CLIC1-208ENST00000375784 KLHL34Q8N239 644 aa22.78■■□□□ 1.24
CLIC1-208ENST00000375784 PELP1Q8IZL8 1130 aaKnown RBP22.76■■□□□ 1.23
CLIC1-208ENST00000375784 LTV1Q96GA3 475 aaPredicted RBP22.76■■□□□ 1.23
CLIC1-208ENST00000375784 KNSTRNQ9Y448 316 aa22.76■■□□□ 1.23
CLIC1-208ENST00000375784 PNPLA7Q6ZV29 1317 aa22.76■■□□□ 1.23
CLIC1-208ENST00000375784 LTN1O94822 1766 aa22.76■■□□□ 1.23
CLIC1-208ENST00000375784 RTL1A6NKG5 1358 aa22.75■■□□□ 1.23
CLIC1-208ENST00000375784 IFFO2Q5TF58 517 aa22.74■■□□□ 1.23
CLIC1-208ENST00000375784 TFCP2L1Q9NZI6 479 aa22.74■■□□□ 1.23
CLIC1-208ENST00000375784 KIF20BQ96Q89 1820 aa22.73■■□□□ 1.23
CLIC1-208ENST00000375784 DDX54Q8TDD1 881 aaKnown RBP22.73■■□□□ 1.23
CLIC1-208ENST00000375784 NLGN2Q8NFZ4 835 aa22.72■■□□□ 1.23
CLIC1-208ENST00000375784 KIF24Q5T7B8 1368 aa22.72■■□□□ 1.23
CLIC1-208ENST00000375784 KCNQ4P56696 695 aa22.7■■□□□ 1.22
CLIC1-208ENST00000375784 NSD2O96028 1365 aa22.7■■□□□ 1.22
CLIC1-208ENST00000375784 COL24A1Q17RW2 1714 aa22.7■■□□□ 1.22
CLIC1-208ENST00000375784 QSER1Q2KHR3 1735 aa22.7■■□□□ 1.22
CLIC1-208ENST00000375784 FLT4P35916 1363 aa22.69■■□□□ 1.22
CLIC1-208ENST00000375784 PPM1GO15355 546 aaPredicted RBP22.69■■□□□ 1.22
CLIC1-208ENST00000375784 SMG6Q86US8 1419 aaKnown RBP22.68■■□□□ 1.22
CLIC1-208ENST00000375784 TNNT2P45379 298 aaPredicted RBP22.68■■□□□ 1.22
CLIC1-208ENST00000375784 HSP90AB2PQ58FF8 381 aa22.68■■□□□ 1.22
CLIC1-208ENST00000375784 MORC1Q86VD1 984 aa22.68■■□□□ 1.22
CLIC1-208ENST00000375784 EMILIN1Q9Y6C2 1016 aa22.68■■□□□ 1.22
CLIC1-208ENST00000375784 INSRP06213 1382 aa22.67■■□□□ 1.22
CLIC1-208ENST00000375784 WASHC2AQ641Q2 1341 aa22.67■■□□□ 1.22
CLIC1-208ENST00000375784 GRIN3BO60391 1043 aa22.67■■□□□ 1.22
CLIC1-208ENST00000375784 PRIM1P49642 420 aaKnown RBP22.67■■□□□ 1.22
CLIC1-208ENST00000375784 SYTL4Q96C24 671 aaPredicted RBP22.67■■□□□ 1.22
CLIC1-208ENST00000375784 SHANK3Q9BYB0 1731 aa22.67■■□□□ 1.22
CLIC1-208ENST00000375784 YBX3P16989 372 aaKnown RBP eCLIP22.66■■□□□ 1.224e-18■□□□□ 10.3
CLIC1-208ENST00000375784 POLKQ9UBT6 870 aa22.66■■□□□ 1.22
CLIC1-208ENST00000375784 KAT6BQ8WYB5 2073 aa22.64■■□□□ 1.22
CLIC1-208ENST00000375784 NBPF6Q5VWK0 638 aa22.63■■□□□ 1.21
CLIC1-208ENST00000375784 NBPF4Q96M43 638 aa22.63■■□□□ 1.21
CLIC1-208ENST00000375784 PER1O15534 1290 aaPredicted RBP22.62■■□□□ 1.21
CLIC1-208ENST00000375784 AMER1Q5JTC6 1135 aaPredicted RBP22.62■■□□□ 1.21
CLIC1-208ENST00000375784 CCNL1Q9UK58 526 aaPredicted RBP22.62■■□□□ 1.21
CLIC1-208ENST00000375784 TUBGCP6Q96RT7 1819 aa22.61■■□□□ 1.21
CLIC1-208ENST00000375784 GOLGB1Q14789 3259 aaKnown RBP22.6■■□□□ 1.21
CLIC1-208ENST00000375784 COL23A1Q86Y22 540 aaPredicted RBP22.6■■□□□ 1.21
CLIC1-208ENST00000375784 FAM208AQ9UK61 1670 aaKnown RBP22.6■■□□□ 1.21
CLIC1-208ENST00000375784 ZCRB1Q8TBF4 217 aaKnown RBP22.59■■□□□ 1.21
CLIC1-208ENST00000375784 RAPGEF4Q8WZA2 1011 aa22.59■■□□□ 1.21
CLIC1-208ENST00000375784 ATP10DQ9P241 1426 aa22.57■■□□□ 1.2
CLIC1-208ENST00000375784 LY75O60449 1722 aa22.57■■□□□ 1.2
CLIC1-208ENST00000375784 USHBP1Q8N6Y0 703 aa22.57■■□□□ 1.2
CLIC1-208ENST00000375784 ANKRD26Q9UPS8 1709 aa22.57■■□□□ 1.2
CLIC1-208ENST00000375784 MSL1Q68DK7 614 aa22.56■■□□□ 1.2
CLIC1-208ENST00000375784 DOT1LQ8TEK3 1739 aa22.56■■□□□ 1.2
CLIC1-208ENST00000375784 TATP17735 454 aaPredicted RBP22.55■■□□□ 1.2
CLIC1-208ENST00000375784 CC2D1BQ5T0F9 858 aaKnown RBP22.55■■□□□ 1.2
CLIC1-208ENST00000375784 MAP2P11137 1827 aaKnown RBP22.54■■□□□ 1.2
CLIC1-208ENST00000375784 ZEB1P37275 1124 aaPredicted RBP22.54■■□□□ 1.2
CLIC1-208ENST00000375784 CD2APQ9Y5K6 639 aa22.54■■□□□ 1.2
CLIC1-208ENST00000375784 MEGF6O75095 1541 aa22.53■■□□□ 1.2
CLIC1-208ENST00000375784 GPBP1L1Q9HC44 474 aaPredicted RBP22.53■■□□□ 1.2
CLIC1-208ENST00000375784 NPC1L1Q9UHC9 1359 aa22.52■■□□□ 1.2
CLIC1-208ENST00000375784 CEP350Q5VT06 3117 aa22.52■■□□□ 1.2
CLIC1-208ENST00000375784 EIF4A2Q14240 407 aaKnown RBP22.52■■□□□ 1.2
CLIC1-208ENST00000375784 EYA1Q99502 592 aa22.52■■□□□ 1.2
CLIC1-208ENST00000375784 CNGB1Q14028 1251 aaPredicted RBP22.49■■□□□ 1.19
CLIC1-208ENST00000375784 FLAD1Q8NFF5 587 aa22.49■■□□□ 1.19
CLIC1-208ENST00000375784 ADCY9O60503 1353 aa22.49■■□□□ 1.19
CLIC1-208ENST00000375784 HSPA6P17066 643 aa22.48■■□□□ 1.19
CLIC1-208ENST00000375784 HMGB2P26583 209 aaKnown RBP22.48■■□□□ 1.19
CLIC1-208ENST00000375784 RGPD2P0DJD1 1756 aa22.48■■□□□ 1.19
CLIC1-208ENST00000375784 MTHFSP49914 203 aa22.47■■□□□ 1.19
CLIC1-208ENST00000375784 ZNF526Q8TF50 670 aaPredicted RBP22.45■■□□□ 1.18
CLIC1-208ENST00000375784 SPG7Q9UQ90 795 aa22.45■■□□□ 1.18
CLIC1-208ENST00000375784 PCDH11XQ9BZA7 1347 aa22.45■■□□□ 1.18
CLIC1-208ENST00000375784 PCDH11YQ9BZA8 1340 aa22.45■■□□□ 1.18
CLIC1-208ENST00000375784 NCAPD2Q15021 1401 aa22.44■■□□□ 1.18
CLIC1-208ENST00000375784 PALLDQ8WX93 1383 aa22.44■■□□□ 1.18
CLIC1-208ENST00000375784 IGSF1Q8N6C5 1336 aa22.43■■□□□ 1.18
CLIC1-208ENST00000375784 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.43■■□□□ 1.18
CLIC1-208ENST00000375784 C5P01031 1676 aa22.42■■□□□ 1.18
CLIC1-208ENST00000375784 MPRIPQ6WCQ1 1025 aa22.41■■□□□ 1.18
CLIC1-208ENST00000375784 IL13P35225 146 aa22.4■■□□□ 1.18
CLIC1-208ENST00000375784 MAPK8IP2Q13387 824 aaPredicted RBP22.39■■□□□ 1.17
CLIC1-208ENST00000375784 AMIGO3Q86WK7 504 aa22.39■■□□□ 1.17
CLIC1-208ENST00000375784 AK7Q96M32 723 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms