RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 KRT24Q2M2I5 525 aa17.61■□□□□ 0.41
MSH5-202ENST00000375740 ABTB2Q8N961 1025 aa17.61■□□□□ 0.41
MSH5-202ENST00000375740 ABCC4O15439 1325 aa17.6■□□□□ 0.41
MSH5-202ENST00000375740 PKNOX2Q96KN3 472 aa17.6■□□□□ 0.41
MSH5-202ENST00000375740 API5Q9BZZ5 524 aaKnown RBP17.59■□□□□ 0.41
MSH5-202ENST00000375740 CHMP4BQ9H444 224 aaKnown RBP17.59■□□□□ 0.41
MSH5-202ENST00000375740 PHF8Q9UPP1 1060 aa17.59■□□□□ 0.41
MSH5-202ENST00000375740 IGSF1Q8N6C5 1336 aa17.58■□□□□ 0.41
MSH5-202ENST00000375740 KDRP35968 1356 aa17.58■□□□□ 0.41
MSH5-202ENST00000375740 CRB1P82279 1406 aa17.58■□□□□ 0.4
MSH5-202ENST00000375740 HOXC9P31274 260 aa17.58■□□□□ 0.4
MSH5-202ENST00000375740 MARF1Q9Y4F3 1742 aaKnown RBP17.58■□□□□ 0.4
MSH5-202ENST00000375740 C1orf115Q9H7X2 142 aa17.57■□□□□ 0.4
MSH5-202ENST00000375740 C14orf37Q86TY3 774 aa17.57■□□□□ 0.4
MSH5-202ENST00000375740 MIS18AQ9NYP9 233 aa17.57■□□□□ 0.4
MSH5-202ENST00000375740 ZNF142P52746 1687 aaPredicted RBP17.57■□□□□ 0.4
MSH5-202ENST00000375740 RTF1Q92541 710 aaKnown RBP17.56■□□□□ 0.4
MSH5-202ENST00000375740 ADAMTSL3P82987 1691 aa17.56■□□□□ 0.4
MSH5-202ENST00000375740 KIAA0232Q92628 1395 aa17.56■□□□□ 0.4
MSH5-202ENST00000375740 HAP1P54257 671 aaPredicted RBP17.55■□□□□ 0.4
MSH5-202ENST00000375740 NUCB1Q02818 461 aa17.55■□□□□ 0.4
MSH5-202ENST00000375740 SETD1BQ9UPS6 1966 aaKnown RBP17.54■□□□□ 0.4
MSH5-202ENST00000375740 GAS2L2Q8NHY3 880 aa17.54■□□□□ 0.4
MSH5-202ENST00000375740 LTV1Q96GA3 475 aaPredicted RBP17.54■□□□□ 0.4
MSH5-202ENST00000375740 KIF24Q5T7B8 1368 aa17.54■□□□□ 0.4
MSH5-202ENST00000375740 SIRT2Q8IXJ6 389 aa17.53■□□□□ 0.4
MSH5-202ENST00000375740 LNPKQ9C0E8 428 aa17.53■□□□□ 0.4
MSH5-202ENST00000375740 USP54Q70EL1 1684 aa17.53■□□□□ 0.4
MSH5-202ENST00000375740 ESCO1Q5FWF5 840 aa17.53■□□□□ 0.4
MSH5-202ENST00000375740 CHD1LQ86WJ1 897 aa17.53■□□□□ 0.4
MSH5-202ENST00000375740 ARXQ96QS3 562 aa17.53■□□□□ 0.4
MSH5-202ENST00000375740 UPF2Q9HAU5 1272 aaKnown RBP17.52■□□□□ 0.4
MSH5-202ENST00000375740 TSPYL4Q9UJ04 414 aa17.52■□□□□ 0.4
MSH5-202ENST00000375740 PSME1Q06323 249 aa17.52■□□□□ 0.39
MSH5-202ENST00000375740 INTS3Q68E01 1043 aaKnown RBP17.51■□□□□ 0.39
MSH5-202ENST00000375740 GCC1Q96CN9 775 aa17.51■□□□□ 0.39
MSH5-202ENST00000375740 ANKRD45Q5TZF3 282 aa17.51■□□□□ 0.39
MSH5-202ENST00000375740 NWD1Q149M9 1564 aa17.5■□□□□ 0.39
MSH5-202ENST00000375740 NPHP4O75161 1426 aaPredicted RBP17.5■□□□□ 0.39
MSH5-202ENST00000375740 ADGRL3Q9HAR2 1447 aa17.5■□□□□ 0.39
MSH5-202ENST00000375740 HTATSF1O43719 755 aaKnown RBP17.5■□□□□ 0.39
MSH5-202ENST00000375740 TBC1D32Q96NH3 1257 aa17.5■□□□□ 0.39
MSH5-202ENST00000375740 SLC4A2P04920 1241 aa17.49■□□□□ 0.39
MSH5-202ENST00000375740 GNAT3A8MTJ3 354 aa17.49■□□□□ 0.39
MSH5-202ENST00000375740 RGS12O14924 1447 aa17.49■□□□□ 0.39
MSH5-202ENST00000375740 SLKQ9H2G2 1235 aaPredicted RBP17.48■□□□□ 0.39
MSH5-202ENST00000375740 PTPRCP08575 1304 aa17.47■□□□□ 0.39
MSH5-202ENST00000375740 VSIG10Q8N0Z9 540 aa17.47■□□□□ 0.39
MSH5-202ENST00000375740 USHBP1Q8N6Y0 703 aa17.47■□□□□ 0.39
MSH5-202ENST00000375740 IP6K1Q92551 441 aa17.47■□□□□ 0.39
MSH5-202ENST00000375740 LTN1O94822 1766 aa17.46■□□□□ 0.39
MSH5-202ENST00000375740 IL17REQ8NFR9 667 aa17.46■□□□□ 0.39
MSH5-202ENST00000375740 ORAI2Q96SN7 254 aa17.46■□□□□ 0.39
MSH5-202ENST00000375740 ZMYND15Q9H091 742 aa17.46■□□□□ 0.39
MSH5-202ENST00000375740 RTL1A6NKG5 1358 aa17.46■□□□□ 0.39
MSH5-202ENST00000375740 G2E3Q7L622 706 aa17.45■□□□□ 0.38
MSH5-202ENST00000375740 ZBTB7CA1YPR0 619 aa17.44■□□□□ 0.38
MSH5-202ENST00000375740 MFAP1P55081 439 aaKnown RBP17.44■□□□□ 0.38
MSH5-202ENST00000375740 BECN1Q14457 450 aa17.44■□□□□ 0.38
MSH5-202ENST00000375740 MAP3K5Q99683 1374 aa17.44■□□□□ 0.38
MSH5-202ENST00000375740 KCNH5Q8NCM2 988 aa17.44■□□□□ 0.38
MSH5-202ENST00000375740 NFAT5O94916 1531 aa17.43■□□□□ 0.38
MSH5-202ENST00000375740 XPCQ01831 940 aaPredicted RBP17.43■□□□□ 0.38
MSH5-202ENST00000375740 NBPF6Q5VWK0 638 aa17.43■□□□□ 0.38
MSH5-202ENST00000375740 NBPF4Q96M43 638 aa17.43■□□□□ 0.38
MSH5-202ENST00000375740 C22orf23Q9BZE7 217 aa17.43■□□□□ 0.38
MSH5-202ENST00000375740 MSH6P52701 1360 aa17.42■□□□□ 0.38
MSH5-202ENST00000375740 NAP1L5Q96NT1 182 aaPredicted RBP17.42■□□□□ 0.38
MSH5-202ENST00000375740 DCTPP1Q9H773 170 aa17.42■□□□□ 0.38
MSH5-202ENST00000375740 LRRC37A3O60309 1634 aa17.42■□□□□ 0.38
MSH5-202ENST00000375740 TAF7Q15545 349 aaPredicted RBP17.42■□□□□ 0.38
MSH5-202ENST00000375740 ANKRD44Q8N8A2 993 aa17.42■□□□□ 0.38
MSH5-202ENST00000375740 PLEKHG5O94827 1062 aa17.41■□□□□ 0.38
MSH5-202ENST00000375740 BMP2KLQ5H9B9 411 aa17.41■□□□□ 0.38
MSH5-202ENST00000375740 MEIS3Q99687 375 aa17.41■□□□□ 0.38
MSH5-202ENST00000375740 F6X3S4 739 aa17.41■□□□□ 0.38
MSH5-202ENST00000375740 XRCC6P12956 609 aaKnown RBP eCLIP17.41■□□□□ 0.38
MSH5-202ENST00000375740 PROSER2Q86WR7 435 aaPredicted RBP17.41■□□□□ 0.38
MSH5-202ENST00000375740 RPAP2Q8IXW5 612 aaPredicted RBP17.41■□□□□ 0.38
MSH5-202ENST00000375740 PANK2Q9BZ23 570 aa17.41■□□□□ 0.38
MSH5-202ENST00000375740 SLC4A10Q6U841 1118 aa17.4■□□□□ 0.38
MSH5-202ENST00000375740 STK31Q9BXU1 1019 aa17.4■□□□□ 0.38
MSH5-202ENST00000375740 CEP85Q6P2H3 762 aa17.4■□□□□ 0.38
MSH5-202ENST00000375740 NECTIN2Q92692 538 aa17.39■□□□□ 0.37
MSH5-202ENST00000375740 ATP10DQ9P241 1426 aa17.39■□□□□ 0.37
MSH5-202ENST00000375740 CCDC30Q5VVM6 783 aa17.39■□□□□ 0.37
MSH5-202ENST00000375740 GCP02774 474 aa17.38■□□□□ 0.37
MSH5-202ENST00000375740 LMOD2Q6P5Q4 547 aa17.38■□□□□ 0.37
MSH5-202ENST00000375740 BABAM1Q9NWV8 329 aa17.38■□□□□ 0.37
MSH5-202ENST00000375740 LRRC59Q96AG4 307 aaKnown RBP17.38■□□□□ 0.37
MSH5-202ENST00000375740 TBC1D2Q9BYX2 928 aa17.38■□□□□ 0.37
MSH5-202ENST00000375740 CCT4P50991 539 aaKnown RBP17.37■□□□□ 0.37
MSH5-202ENST00000375740 RGPD2P0DJD1 1756 aa17.37■□□□□ 0.37
MSH5-202ENST00000375740 GLIPR1L2Q4G1C9 344 aa17.36■□□□□ 0.37
MSH5-202ENST00000375740 L1TD1Q5T7N2 865 aaKnown RBP17.36■□□□□ 0.37
MSH5-202ENST00000375740 ARHGEF25Q86VW2 580 aa17.36■□□□□ 0.37
MSH5-202ENST00000375740 GZF1Q9H116 711 aaPredicted RBP17.36■□□□□ 0.37
MSH5-202ENST00000375740 FLIIQ13045 1269 aa17.36■□□□□ 0.37
MSH5-202ENST00000375740 KRT28Q7Z3Y7 464 aa17.36■□□□□ 0.37
MSH5-202ENST00000375740 ANTXR1Q9H6X2 564 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms