RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 DHX16O60231 1041 aaKnown RBP21.68■■□□□ 1.06
PTPDC1-202ENST00000375360 MPHOSPH8Q99549 860 aa21.68■■□□□ 1.06
PTPDC1-202ENST00000375360 CEP126Q9P2H0 1117 aa21.68■■□□□ 1.06
PTPDC1-202ENST00000375360 CWC27Q6UX04 472 aaKnown RBP21.67■■□□□ 1.06
PTPDC1-202ENST00000375360 SPINK5Q9NQ38 1064 aaPredicted RBP21.67■■□□□ 1.06
PTPDC1-202ENST00000375360 NUCB2P80303 420 aa21.67■■□□□ 1.06
PTPDC1-202ENST00000375360 STK11IPQ8N1F8 1099 aa21.67■■□□□ 1.06
PTPDC1-202ENST00000375360 DNAAF4Q8WXU2 420 aa21.67■■□□□ 1.06
PTPDC1-202ENST00000375360 NGLY1Q96IV0 654 aa21.67■■□□□ 1.06
PTPDC1-202ENST00000375360 PI4KAP2A4QPH2 592 aa21.67■■□□□ 1.06
PTPDC1-202ENST00000375360 STARD3NLO95772 234 aa21.67■■□□□ 1.06
PTPDC1-202ENST00000375360 PI4KAP1Q8N8J0 262 aa21.67■■□□□ 1.06
PTPDC1-202ENST00000375360 CCDC34Q96HJ3 373 aa21.67■■□□□ 1.06
PTPDC1-202ENST00000375360 DBF4Q9UBU7 674 aaPredicted RBP21.67■■□□□ 1.06
PTPDC1-202ENST00000375360 TBX22Q9Y458 520 aa21.67■■□□□ 1.06
PTPDC1-202ENST00000375360 CCDC158Q5M9N0 1113 aa21.66■■□□□ 1.06
PTPDC1-202ENST00000375360 AMOTL1Q8IY63 956 aa21.66■■□□□ 1.06
PTPDC1-202ENST00000375360 TBC1D2BQ9UPU7 963 aa21.66■■□□□ 1.06
PTPDC1-202ENST00000375360 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.66■■□□□ 1.06
PTPDC1-202ENST00000375360 SLC39A6Q13433 755 aa21.66■■□□□ 1.06
PTPDC1-202ENST00000375360 JARID2Q92833 1246 aaPredicted RBP21.66■■□□□ 1.06
PTPDC1-202ENST00000375360 LARP1Q6PKG0 1096 aaKnown RBP21.65■■□□□ 1.06
PTPDC1-202ENST00000375360 ZBTB3Q9H5J0 574 aa21.65■■□□□ 1.06
PTPDC1-202ENST00000375360 YEATS2Q9ULM3 1422 aa21.65■■□□□ 1.06
PTPDC1-202ENST00000375360 TTC21AQ8NDW8 1320 aa21.65■■□□□ 1.06
PTPDC1-202ENST00000375360 PLEKHH1Q9ULM0 1364 aa21.65■■□□□ 1.06
PTPDC1-202ENST00000375360 TRIM29Q14134 588 aa21.65■■□□□ 1.06
PTPDC1-202ENST00000375360 TTC39AQ5SRH9 613 aa21.65■■□□□ 1.06
PTPDC1-202ENST00000375360 ARHGEF12Q9NZN5 1544 aa21.64■■□□□ 1.06
PTPDC1-202ENST00000375360 CHAF1AQ13111 956 aaPredicted RBP21.64■■□□□ 1.06
PTPDC1-202ENST00000375360 IFNL2Q8IZJ0 200 aa21.64■■□□□ 1.06
PTPDC1-202ENST00000375360 TSPYL6Q8N831 410 aa21.64■■□□□ 1.06
PTPDC1-202ENST00000375360 BICD2Q8TD16 824 aa21.64■■□□□ 1.06
PTPDC1-202ENST00000375360 ATP5J2-PTCD1G3V325 749 aa21.64■■□□□ 1.05
PTPDC1-202ENST00000375360 PHF14O94880 888 aa21.64■■□□□ 1.05
PTPDC1-202ENST00000375360 MTHFSDQ2M296 383 aaKnown RBP21.64■■□□□ 1.05
PTPDC1-202ENST00000375360 RRP12Q5JTH9 1297 aaKnown RBP21.63■■□□□ 1.05
PTPDC1-202ENST00000375360 SAMD1Q6SPF0 538 aaPredicted RBP21.63■■□□□ 1.05
PTPDC1-202ENST00000375360 C19orf44Q9H6X5 657 aa21.63■■□□□ 1.05
PTPDC1-202ENST00000375360 ATP10AO60312 1499 aa21.63■■□□□ 1.05
PTPDC1-202ENST00000375360 ERICH2A1L162 156 aa21.63■■□□□ 1.05
PTPDC1-202ENST00000375360 SKOR2Q2VWA4 1001 aaPredicted RBP21.63■■□□□ 1.05
PTPDC1-202ENST00000375360 CHMP4CQ96CF2 233 aa21.63■■□□□ 1.05
PTPDC1-202ENST00000375360 ORAI2Q96SN7 254 aa21.63■■□□□ 1.05
PTPDC1-202ENST00000375360 PCDHB15Q9Y5E8 787 aa21.63■■□□□ 1.05
PTPDC1-202ENST00000375360 MAP3K19Q56UN5 1328 aa21.63■■□□□ 1.05
PTPDC1-202ENST00000375360 RABEP1Q15276 862 aa21.63■■□□□ 1.05
PTPDC1-202ENST00000375360 EYA1Q99502 592 aa21.63■■□□□ 1.05
PTPDC1-202ENST00000375360 EXOC5O00471 708 aa21.62■■□□□ 1.05
PTPDC1-202ENST00000375360 POLR3AO14802 1390 aaPredicted RBP21.62■■□□□ 1.05
PTPDC1-202ENST00000375360 GCP02774 474 aa21.62■■□□□ 1.05
PTPDC1-202ENST00000375360 PUS7Q96PZ0 661 aaKnown RBP21.62■■□□□ 1.05
PTPDC1-202ENST00000375360 NPATQ14207 1427 aa21.62■■□□□ 1.05
PTPDC1-202ENST00000375360 LTKP29376 864 aa21.61■■□□□ 1.05
PTPDC1-202ENST00000375360 PIP4K2AP48426 406 aaPredicted RBP21.61■■□□□ 1.05
PTPDC1-202ENST00000375360 GPTP24298 496 aa21.61■■□□□ 1.05
PTPDC1-202ENST00000375360 PSMA5P28066 241 aa21.61■■□□□ 1.05
PTPDC1-202ENST00000375360 FMNL2Q96PY5 1086 aa21.61■■□□□ 1.05
PTPDC1-202ENST00000375360 A0A087WZG4 1122 aa21.6■■□□□ 1.05
PTPDC1-202ENST00000375360 TRIM34Q9BYJ4 488 aa21.6■■□□□ 1.05
PTPDC1-202ENST00000375360 CCDC8Q9H0W5 538 aaPredicted RBP21.6■■□□□ 1.05
PTPDC1-202ENST00000375360 BOLA2Q9H3K6 86 aa21.6■■□□□ 1.05
PTPDC1-202ENST00000375360 KIF1BPQ96EK5 621 aa21.6■■□□□ 1.05
PTPDC1-202ENST00000375360 MSH6P52701 1360 aa21.6■■□□□ 1.05
PTPDC1-202ENST00000375360 NPHP3Q7Z494 1330 aa21.6■■□□□ 1.05
PTPDC1-202ENST00000375360 STK3Q13188 491 aa21.59■■□□□ 1.05
PTPDC1-202ENST00000375360 TSHZ3Q63HK5 1081 aa21.59■■□□□ 1.05
PTPDC1-202ENST00000375360 MAP3K2Q9Y2U5 619 aa21.59■■□□□ 1.05
PTPDC1-202ENST00000375360 MX1P20591 662 aa21.59■■□□□ 1.05
PTPDC1-202ENST00000375360 MEIS3Q99687 375 aa21.59■■□□□ 1.05
PTPDC1-202ENST00000375360 GLIPR1L2Q4G1C9 344 aa21.59■■□□□ 1.05
PTPDC1-202ENST00000375360 IL16Q14005 1332 aa21.58■■□□□ 1.05
PTPDC1-202ENST00000375360 BECN2A8MW95 431 aa21.58■■□□□ 1.05
PTPDC1-202ENST00000375360 RLBP1P12271 317 aa21.58■■□□□ 1.04
PTPDC1-202ENST00000375360 TPM4P67936 248 aa21.58■■□□□ 1.04
PTPDC1-202ENST00000375360 UPF3BQ9BZI7 483 aaKnown RBP21.58■■□□□ 1.04
PTPDC1-202ENST00000375360 ABCA8O94911 1581 aa21.58■■□□□ 1.04
PTPDC1-202ENST00000375360 HIP1O00291 1037 aa21.58■■□□□ 1.04
PTPDC1-202ENST00000375360 PPP1R1BQ9UD71 204 aaPredicted RBP21.58■■□□□ 1.04
PTPDC1-202ENST00000375360 ATP2B1P20020 1258 aa21.57■■□□□ 1.04
PTPDC1-202ENST00000375360 COL17A1Q9UMD9 1497 aaPredicted RBP21.57■■□□□ 1.04
PTPDC1-202ENST00000375360 KDM6BO15054 1643 aa21.56■■□□□ 1.04
PTPDC1-202ENST00000375360 HYPKQ9NX55 129 aa21.56■■□□□ 1.04
PTPDC1-202ENST00000375360 CHPF2Q9P2E5 772 aa21.56■■□□□ 1.04
PTPDC1-202ENST00000375360 ABCC1P33527 1531 aa21.56■■□□□ 1.04
PTPDC1-202ENST00000375360 PES1O00541 588 aaKnown RBP21.56■■□□□ 1.04
PTPDC1-202ENST00000375360 DMRT2Q9Y5R5 561 aa21.56■■□□□ 1.04
PTPDC1-202ENST00000375360 UBE3BQ7Z3V4 1068 aa21.56■■□□□ 1.04
PTPDC1-202ENST00000375360 MAST1Q9Y2H9 1570 aa21.56■■□□□ 1.04
PTPDC1-202ENST00000375360 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.55■■□□□ 1.04
PTPDC1-202ENST00000375360 IDH1O75874 414 aaKnown RBP21.54■■□□□ 1.04
PTPDC1-202ENST00000375360 CYP46A1Q9Y6A2 500 aa21.54■■□□□ 1.04
PTPDC1-202ENST00000375360 PTPRCP08575 1304 aa21.54■■□□□ 1.04
PTPDC1-202ENST00000375360 GOLGA6L19H0YKK7 550 aa21.54■■□□□ 1.04
PTPDC1-202ENST00000375360 METTL24Q5JXM2 366 aa21.54■■□□□ 1.04
PTPDC1-202ENST00000375360 PPP1R42Q7Z4L9 355 aa21.54■■□□□ 1.04
PTPDC1-202ENST00000375360 VAMP4O75379 141 aa21.53■■□□□ 1.04
PTPDC1-202ENST00000375360 DDX17Q92841 729 aaKnown RBP21.53■■□□□ 1.04
PTPDC1-202ENST00000375360 FLT4P35916 1363 aa21.53■■□□□ 1.04
PTPDC1-202ENST00000375360 ERCC6L2Q5T890 1561 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms