RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 ELL2O00472 640 aaPredicted RBP15.02■□□□□ -0
C9orf3-203ENST00000375315 SASS6Q6UVJ0 657 aa15.02■□□□□ -0
C9orf3-203ENST00000375315 USHBP1Q8N6Y0 703 aa15.02■□□□□ -0
C9orf3-203ENST00000375315 KIF20AO95235 890 aa15.02□□□□□ -0.01
C9orf3-203ENST00000375315 GTPBP4Q9BZE4 634 aaKnown RBP15.02□□□□□ -0.01
C9orf3-203ENST00000375315 IBTKQ9P2D0 1353 aaPredicted RBP15.02□□□□□ -0.01
C9orf3-203ENST00000375315 ZSCAN20P17040 1043 aaPredicted RBP15.01□□□□□ -0.01
C9orf3-203ENST00000375315 USP6P35125 1406 aa15.01□□□□□ -0.01
C9orf3-203ENST00000375315 NCOA3Q9Y6Q9 1424 aa15.01□□□□□ -0.01
C9orf3-203ENST00000375315 FAM83GA6ND36 823 aa15.01□□□□□ -0.01
C9orf3-203ENST00000375315 E9PSI1 815 aa15.01□□□□□ -0.01
C9orf3-203ENST00000375315 GTF2E1P29083 439 aaPredicted RBP15.01□□□□□ -0.01
C9orf3-203ENST00000375315 DDIT3P35638 169 aa15.01□□□□□ -0.01
C9orf3-203ENST00000375315 CABLES1Q8TDN4 633 aa15.01□□□□□ -0.01
C9orf3-203ENST00000375315 MAP3K19Q56UN5 1328 aa15.01□□□□□ -0.01
C9orf3-203ENST00000375315 TMEM94Q12767 1356 aa15.01□□□□□ -0.01
C9orf3-203ENST00000375315 TMPOP42166 694 aaKnown RBP15.01□□□□□ -0.01
C9orf3-203ENST00000375315 ZC3H6P61129 1189 aaKnown RBP15□□□□□ -0.01
C9orf3-203ENST00000375315 RAB3GAP1Q15042 981 aa15□□□□□ -0.01
C9orf3-203ENST00000375315 MCM5P33992 734 aa15□□□□□ -0.01
C9orf3-203ENST00000375315 EIF4A2Q14240 407 aaKnown RBP15□□□□□ -0.01
C9orf3-203ENST00000375315 PPP4R3BQ5MIZ7 849 aa15□□□□□ -0.01
C9orf3-203ENST00000375315 RGPD8O14715 1765 aaPredicted RBP15□□□□□ -0.01
C9orf3-203ENST00000375315 SMC5Q8IY18 1101 aa14.99□□□□□ -0.01
C9orf3-203ENST00000375315 PANK1Q8TE04 598 aa14.99□□□□□ -0.01
C9orf3-203ENST00000375315 DIP2AQ14689 1571 aa14.99□□□□□ -0.01
C9orf3-203ENST00000375315 RWDD1Q9H446 243 aaPredicted RBP14.99□□□□□ -0.01
C9orf3-203ENST00000375315 PTCH1Q13635 1447 aa14.99□□□□□ -0.01
C9orf3-203ENST00000375315 HSP90AB1P08238 724 aaKnown RBP14.99□□□□□ -0.01
C9orf3-203ENST00000375315 C19orf44Q9H6X5 657 aa14.99□□□□□ -0.01
C9orf3-203ENST00000375315 NAP1L2Q9ULW6 460 aaPredicted RBP14.98□□□□□ -0.01
C9orf3-203ENST00000375315 LETM1O95202 739 aaPredicted RBP14.98□□□□□ -0.01
C9orf3-203ENST00000375315 IL13P35225 146 aa14.98□□□□□ -0.01
C9orf3-203ENST00000375315 SNX21Q969T3 373 aa14.98□□□□□ -0.01
C9orf3-203ENST00000375315 KRT28Q7Z3Y7 464 aa14.97□□□□□ -0.01
C9orf3-203ENST00000375315 ZKSCAN5Q9Y2L8 839 aa14.97□□□□□ -0.01
C9orf3-203ENST00000375315 KLHL40Q2TBA0 621 aa14.97□□□□□ -0.01
C9orf3-203ENST00000375315 DDX49Q9Y6V7 483 aaKnown RBP14.97□□□□□ -0.01
C9orf3-203ENST00000375315 PIK3R4Q99570 1358 aa14.96□□□□□ -0.01
C9orf3-203ENST00000375315 CDC42BPGQ6DT37 1551 aa14.96□□□□□ -0.01
C9orf3-203ENST00000375315 PLEKHF1Q96S99 279 aa14.95□□□□□ -0.02
C9orf3-203ENST00000375315 PDLIM2Q96JY6 352 aa14.94□□□□□ -0.02
C9orf3-203ENST00000375315 TRIM35Q9UPQ4 493 aa14.94□□□□□ -0.02
C9orf3-203ENST00000375315 PCDHB15Q9Y5E8 787 aa14.94□□□□□ -0.02
C9orf3-203ENST00000375315 FCHSD2O94868 740 aa14.94□□□□□ -0.02
C9orf3-203ENST00000375315 ZNF445P59923 1031 aa14.94□□□□□ -0.02
C9orf3-203ENST00000375315 MCM10Q7L590 875 aa14.94□□□□□ -0.02
C9orf3-203ENST00000375315 NGEFQ8N5V2 710 aa14.94□□□□□ -0.02
C9orf3-203ENST00000375315 MIS18AQ9NYP9 233 aa14.94□□□□□ -0.02
C9orf3-203ENST00000375315 EXOSC9Q06265 439 aaKnown RBP14.93□□□□□ -0.02
C9orf3-203ENST00000375315 LRRC59Q96AG4 307 aaKnown RBP14.93□□□□□ -0.02
C9orf3-203ENST00000375315 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.93□□□□□ -0.02
C9orf3-203ENST00000375315 TNNQ9UQP3 1299 aa14.93□□□□□ -0.02
C9orf3-203ENST00000375315 MAP2P11137 1827 aaKnown RBP14.93□□□□□ -0.02
C9orf3-203ENST00000375315 TAF3Q5VWG9 929 aa14.93□□□□□ -0.02
C9orf3-203ENST00000375315 KNDC1Q76NI1 1749 aa14.93□□□□□ -0.02
C9orf3-203ENST00000375315 CCDC39Q9UFE4 941 aa14.92□□□□□ -0.02
C9orf3-203ENST00000375315 CHRNA2Q15822 529 aa14.92□□□□□ -0.02
C9orf3-203ENST00000375315 ADGRL3Q9HAR2 1447 aa14.92□□□□□ -0.02
C9orf3-203ENST00000375315 HAP1P54257 671 aaPredicted RBP14.92□□□□□ -0.02
C9orf3-203ENST00000375315 TTC21AQ8NDW8 1320 aa14.92□□□□□ -0.02
C9orf3-203ENST00000375315 IPO4Q8TEX9 1081 aaKnown RBP14.91□□□□□ -0.02
C9orf3-203ENST00000375315 EYA1Q99502 592 aa14.91□□□□□ -0.02
C9orf3-203ENST00000375315 RBM25P49756 843 aaKnown RBP14.9□□□□□ -0.02
C9orf3-203ENST00000375315 USP32Q8NFA0 1604 aa14.9□□□□□ -0.02
C9orf3-203ENST00000375315 GCP02774 474 aa14.9□□□□□ -0.02
C9orf3-203ENST00000375315 CBX1P83916 185 aa14.9□□□□□ -0.02
C9orf3-203ENST00000375315 MYRIPQ8NFW9 859 aa14.9□□□□□ -0.02
C9orf3-203ENST00000375315 CHMP4BQ9H444 224 aaKnown RBP14.9□□□□□ -0.02
C9orf3-203ENST00000375315 XRN1Q8IZH2 1706 aaKnown RBP14.89□□□□□ -0.03
C9orf3-203ENST00000375315 HOXC9P31274 260 aa14.89□□□□□ -0.03
C9orf3-203ENST00000375315 CLEC17AQ6ZS10 378 aa14.89□□□□□ -0.03
C9orf3-203ENST00000375315 NFE2L2Q16236 605 aa14.88□□□□□ -0.03
C9orf3-203ENST00000375315 KRT24Q2M2I5 525 aa14.88□□□□□ -0.03
C9orf3-203ENST00000375315 TAF7LQ5H9L4 462 aa14.88□□□□□ -0.03
C9orf3-203ENST00000375315 CADPS2Q86UW7 1296 aa14.88□□□□□ -0.03
C9orf3-203ENST00000375315 PNPLA6Q8IY17 1366 aa14.88□□□□□ -0.03
C9orf3-203ENST00000375315 SHPRHQ149N8 1683 aa14.88□□□□□ -0.03
C9orf3-203ENST00000375315 ITSN1Q15811 1721 aa14.88□□□□□ -0.03
C9orf3-203ENST00000375315 CHD2O14647 1828 aaKnown RBP14.88□□□□□ -0.03
C9orf3-203ENST00000375315 KIF20BQ96Q89 1820 aa14.88□□□□□ -0.03
C9orf3-203ENST00000375315 HMGN5P82970 282 aaKnown RBP14.87□□□□□ -0.03
C9orf3-203ENST00000375315 DNTTIP2Q5QJE6 756 aaKnown RBP14.87□□□□□ -0.03
C9orf3-203ENST00000375315 TMEM51Q9NW97 253 aa14.87□□□□□ -0.03
C9orf3-203ENST00000375315 OVOS2A0A0J9YW53 1432 aa14.87□□□□□ -0.03
C9orf3-203ENST00000375315 OVOS2Q6IE36 1432 aa14.87□□□□□ -0.03
C9orf3-203ENST00000375315 MSH6P52701 1360 aa14.87□□□□□ -0.03
C9orf3-203ENST00000375315 BAG4O95429 457 aaKnown RBP14.87□□□□□ -0.03
C9orf3-203ENST00000375315 SSFA2P28290 1259 aa14.87□□□□□ -0.03
C9orf3-203ENST00000375315 PRIMPOLQ96LW4 560 aa14.87□□□□□ -0.03
C9orf3-203ENST00000375315 RBSNQ9H1K0 784 aa14.87□□□□□ -0.03
C9orf3-203ENST00000375315 NALCNQ8IZF0 1738 aa14.87□□□□□ -0.03
C9orf3-203ENST00000375315 ZNF142P52746 1687 aaPredicted RBP14.87□□□□□ -0.03
C9orf3-203ENST00000375315 CSB-PGBD3P0DP91 1061 aa14.86□□□□□ -0.03
C9orf3-203ENST00000375315 ZSCAN23Q3MJ62 389 aa14.86□□□□□ -0.03
C9orf3-203ENST00000375315 COL3A1P02461 1466 aaPredicted RBP14.86□□□□□ -0.03
C9orf3-203ENST00000375315 KIAA2012Q0VF49 1180 aa14.86□□□□□ -0.03
C9orf3-203ENST00000375315 CAVIN1Q6NZI2 390 aaKnown RBP14.86□□□□□ -0.03
C9orf3-203ENST00000375315 SMC4Q9NTJ3 1288 aa14.86□□□□□ -0.03
C9orf3-203ENST00000375315 WDR63Q8IWG1 891 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms