RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 WWC3Q9ULE0 1092 aa25.42■■□□□ 1.66
H2AFX-201ENST00000375167 ANKRD36BQ8N2N9 1353 aa25.41■■□□□ 1.66
H2AFX-201ENST00000375167 TTC21AQ8NDW8 1320 aa25.4■■□□□ 1.66
H2AFX-201ENST00000375167 CENPJQ9HC77 1338 aaPredicted RBP25.4■■□□□ 1.66
H2AFX-201ENST00000375167 DDX54Q8TDD1 881 aaKnown RBP25.4■■□□□ 1.66
H2AFX-201ENST00000375167 LTN1O94822 1766 aa25.38■■□□□ 1.65
H2AFX-201ENST00000375167 C5P01031 1676 aa25.37■■□□□ 1.65
H2AFX-201ENST00000375167 PRIM1P49642 420 aaKnown RBP25.37■■□□□ 1.65
H2AFX-201ENST00000375167 HTRA3P83110 453 aa25.37■■□□□ 1.65
H2AFX-201ENST00000375167 RBM46Q8TBY0 533 aaKnown RBP25.37■■□□□ 1.65
H2AFX-201ENST00000375167 FLAD1Q8NFF5 587 aa25.36■■□□□ 1.65
H2AFX-201ENST00000375167 NSD2O96028 1365 aa25.36■■□□□ 1.65
H2AFX-201ENST00000375167 ZNF692Q9BU19 519 aaPredicted RBP25.35■■□□□ 1.65
H2AFX-201ENST00000375167 C16orf71Q8IYS4 520 aaPredicted RBP25.34■■□□□ 1.65
H2AFX-201ENST00000375167 NMRK2Q9NPI5 230 aa25.34■■□□□ 1.65
H2AFX-201ENST00000375167 ANKRD24Q8TF21 1146 aa25.33■■□□□ 1.65
H2AFX-201ENST00000375167 USP47Q96K76 1375 aa25.33■■□□□ 1.65
H2AFX-201ENST00000375167 USP54Q70EL1 1684 aa25.32■■□□□ 1.64
H2AFX-201ENST00000375167 HMGB2P26583 209 aaKnown RBP25.31■■□□□ 1.64
H2AFX-201ENST00000375167 FSTL1Q12841 308 aa25.31■■□□□ 1.64
H2AFX-201ENST00000375167 FAM208AQ9UK61 1670 aaKnown RBP25.3■■□□□ 1.64
H2AFX-201ENST00000375167 TAF1LQ8IZX4 1826 aa25.27■■□□□ 1.64
H2AFX-201ENST00000375167 EVC2Q86UK5 1308 aa25.26■■□□□ 1.63
H2AFX-201ENST00000375167 NBPF1Q3BBV0 1214 aa25.26■■□□□ 1.63
H2AFX-201ENST00000375167 KTN1Q86UP2 1357 aaKnown RBP25.25■■□□□ 1.63
H2AFX-201ENST00000375167 PCNTO95613 3336 aa25.25■■□□□ 1.63
H2AFX-201ENST00000375167 MON2Q7Z3U7 1717 aa25.24■■□□□ 1.63
H2AFX-201ENST00000375167 HSPA1AP0DMV8 641 aaKnown RBP25.23■■□□□ 1.63
H2AFX-201ENST00000375167 HSPA1BP0DMV9 641 aaKnown RBP25.23■■□□□ 1.63
H2AFX-201ENST00000375167 USP31Q70CQ4 1352 aa25.22■■□□□ 1.63
H2AFX-201ENST00000375167 PLEKHG2Q9H7P9 1386 aa25.21■■□□□ 1.63
H2AFX-201ENST00000375167 C4BP0C0L5 1744 aa25.21■■□□□ 1.63
H2AFX-201ENST00000375167 NSD3Q9BZ95 1437 aa25.21■■□□□ 1.63
H2AFX-201ENST00000375167 TOGARAM1Q9Y4F4 1720 aa25.2■■□□□ 1.62
H2AFX-201ENST00000375167 AK7Q96M32 723 aa25.19■■□□□ 1.62
H2AFX-201ENST00000375167 UBR3Q6ZT12 1888 aa25.18■■□□□ 1.62
H2AFX-201ENST00000375167 BCS1LQ9Y276 419 aa25.18■■□□□ 1.62
H2AFX-201ENST00000375167 PXDNLA1KZ92 1463 aa25.17■■□□□ 1.62
H2AFX-201ENST00000375167 ARHGAP27Q6ZUM4 889 aa25.17■■□□□ 1.62
H2AFX-201ENST00000375167 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.17■■□□□ 1.62
H2AFX-201ENST00000375167 ZCRB1Q8TBF4 217 aaKnown RBP25.17■■□□□ 1.62
H2AFX-201ENST00000375167 PCDH10Q9P2E7 1040 aa25.17■■□□□ 1.62
H2AFX-201ENST00000375167 KIF13BQ9NQT8 1826 aa25.16■■□□□ 1.62
H2AFX-201ENST00000375167 PKD1L3Q7Z443 1732 aa25.16■■□□□ 1.62
H2AFX-201ENST00000375167 RAB3GAP2Q9H2M9 1393 aa25.16■■□□□ 1.62
H2AFX-201ENST00000375167 N4BP2Q86UW6 1770 aaPredicted RBP25.16■■□□□ 1.62
H2AFX-201ENST00000375167 PHF14O94880 888 aa25.16■■□□□ 1.62
H2AFX-201ENST00000375167 C10orf71Q711Q0 1435 aa25.16■■□□□ 1.62
H2AFX-201ENST00000375167 KDM2BQ8NHM5 1336 aa25.15■■□□□ 1.62
H2AFX-201ENST00000375167 KIAA1551Q9HCM1 1747 aa25.15■■□□□ 1.62
H2AFX-201ENST00000375167 PALLDQ8WX93 1383 aa25.15■■□□□ 1.62
H2AFX-201ENST00000375167 TNRC6CQ9HCJ0 1690 aaKnown RBP25.15■■□□□ 1.62
H2AFX-201ENST00000375167 LTV1Q96GA3 475 aaPredicted RBP25.14■■□□□ 1.61
H2AFX-201ENST00000375167 SMC1BQ8NDV3 1235 aa25.13■■□□□ 1.61
H2AFX-201ENST00000375167 KCPQ6ZWJ8 1503 aa25.13■■□□□ 1.61
H2AFX-201ENST00000375167 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.12■■□□□ 1.61
H2AFX-201ENST00000375167 NME9Q86XW9 330 aa25.12■■□□□ 1.61
H2AFX-201ENST00000375167 MEGF6O75095 1541 aa25.11■■□□□ 1.61
H2AFX-201ENST00000375167 C9orf131Q5VYM1 1079 aa25.11■■□□□ 1.61
H2AFX-201ENST00000375167 TGFB2P61812 414 aa25.1■■□□□ 1.61
H2AFX-201ENST00000375167 AMIGO3Q86WK7 504 aa25.1■■□□□ 1.61
H2AFX-201ENST00000375167 IP6K1Q92551 441 aa25.1■■□□□ 1.61
H2AFX-201ENST00000375167 SSFA2P28290 1259 aa25.09■■□□□ 1.61
H2AFX-201ENST00000375167 FCHSD2O94868 740 aa25.06■■□□□ 1.6
H2AFX-201ENST00000375167 RGPD2P0DJD1 1756 aa25.06■■□□□ 1.6
H2AFX-201ENST00000375167 RRAGCQ9HB90 399 aa25.06■■□□□ 1.6
H2AFX-201ENST00000375167 BRCA1P38398 1863 aaKnown RBP25.06■■□□□ 1.6
H2AFX-201ENST00000375167 ARFGEF1Q9Y6D6 1849 aa25.06■■□□□ 1.6
H2AFX-201ENST00000375167 A0A0G2JLW4 131 aa25.05■■□□□ 1.6
H2AFX-201ENST00000375167 SBNO2Q9Y2G9 1366 aa25.05■■□□□ 1.6
H2AFX-201ENST00000375167 MMP10P09238 476 aa25.05■■□□□ 1.6
H2AFX-201ENST00000375167 SMIM5Q71RC9 77 aa25.05■■□□□ 1.6
H2AFX-201ENST00000375167 SMARCC1Q92922 1105 aaPredicted RBP25.04■■□□□ 1.6
H2AFX-201ENST00000375167 CGNL1Q0VF96 1302 aa25.02■■□□□ 1.6
H2AFX-201ENST00000375167 MPRIPQ6WCQ1 1025 aa25.02■■□□□ 1.6
H2AFX-201ENST00000375167 RNF181Q9P0P0 153 aa25■■□□□ 1.59
H2AFX-201ENST00000375167 ITGB4P16144 1822 aa24.99■■□□□ 1.59
H2AFX-201ENST00000375167 EDC4Q6P2E9 1401 aaKnown RBP24.98■■□□□ 1.59
H2AFX-201ENST00000375167 DPEP1P16444 411 aa24.98■■□□□ 1.59
H2AFX-201ENST00000375167 CD163L1Q9NR16 1453 aa24.98■■□□□ 1.59
H2AFX-201ENST00000375167 PCDH11XQ9BZA7 1347 aa24.98■■□□□ 1.59
H2AFX-201ENST00000375167 PCDH11YQ9BZA8 1340 aa24.98■■□□□ 1.59
H2AFX-201ENST00000375167 RAPGEF4Q8WZA2 1011 aa24.97■■□□□ 1.59
H2AFX-201ENST00000375167 GNPATO15228 680 aa24.96■■□□□ 1.59
H2AFX-201ENST00000375167 CCDC87Q9NVE4 849 aa24.96■■□□□ 1.59
H2AFX-201ENST00000375167 HDGFL2Q7Z4V5 671 aaPredicted RBP24.95■■□□□ 1.59
H2AFX-201ENST00000375167 HOXC9P31274 260 aa24.94■■□□□ 1.58
H2AFX-201ENST00000375167 MAP2P11137 1827 aaKnown RBP24.94■■□□□ 1.58
H2AFX-201ENST00000375167 C4AP0C0L4 1744 aa24.94■■□□□ 1.58
H2AFX-201ENST00000375167 AMPHP49418 695 aa24.93■■□□□ 1.58
H2AFX-201ENST00000375167 LINC00116Q8NCU8 138 aa24.93■■□□□ 1.58
H2AFX-201ENST00000375167 SBF1O95248 1867 aa24.93■■□□□ 1.58
H2AFX-201ENST00000375167 FAM161AQ3B820 660 aa24.93■■□□□ 1.58
H2AFX-201ENST00000375167 MAP3K19Q56UN5 1328 aa24.92■■□□□ 1.58
H2AFX-201ENST00000375167 TATP17735 454 aaPredicted RBP24.92■■□□□ 1.58
H2AFX-201ENST00000375167 NLGN1Q8N2Q7 840 aa24.92■■□□□ 1.58
H2AFX-201ENST00000375167 DCAF5Q96JK2 942 aa24.91■■□□□ 1.58
H2AFX-201ENST00000375167 PRDM10Q9NQV6 1147 aa24.91■■□□□ 1.58
H2AFX-201ENST00000375167 LOC102724428A0A0B4J2F2 783 aa24.9■■□□□ 1.58
H2AFX-201ENST00000375167 SIK1P57059 783 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 190.5 ms