RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 NEUROD2Q15784 382 aa22.6■■□□□ 1.21
HLA-DMA-201ENST00000374843 AMOTQ4VCS5 1084 aa22.6■■□□□ 1.21
HLA-DMA-201ENST00000374843 STRN4Q9NRL3 753 aa22.6■■□□□ 1.21
HLA-DMA-201ENST00000374843 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.6■■□□□ 1.21
HLA-DMA-201ENST00000374843 BCL9LQ86UU0 1499 aa22.6■■□□□ 1.21
HLA-DMA-201ENST00000374843 IL16Q14005 1332 aa22.59■■□□□ 1.21
HLA-DMA-201ENST00000374843 GOLGA2Q08379 1002 aa22.59■■□□□ 1.21
HLA-DMA-201ENST00000374843 FNBP4Q8N3X1 1017 aaPredicted RBP22.59■■□□□ 1.21
HLA-DMA-201ENST00000374843 RAPGEF4Q8WZA2 1011 aa22.59■■□□□ 1.21
HLA-DMA-201ENST00000374843 MAP3K5Q99683 1374 aa22.59■■□□□ 1.21
HLA-DMA-201ENST00000374843 ADAMTS7Q9UKP4 1686 aa22.58■■□□□ 1.21
HLA-DMA-201ENST00000374843 PLEKHO1Q53GL0 409 aaPredicted RBP22.58■■□□□ 1.21
HLA-DMA-201ENST00000374843 HTATSF1O43719 755 aaKnown RBP22.57■■□□□ 1.2
HLA-DMA-201ENST00000374843 TATP17735 454 aaPredicted RBP22.57■■□□□ 1.2
HLA-DMA-201ENST00000374843 FBXO41Q8TF61 875 aa22.57■■□□□ 1.2
HLA-DMA-201ENST00000374843 E9PSI1 815 aa22.56■■□□□ 1.2
HLA-DMA-201ENST00000374843 TRMT2AQ8IZ69 625 aaKnown RBP22.56■■□□□ 1.2
HLA-DMA-201ENST00000374843 SHANK3Q9BYB0 1731 aa22.55■■□□□ 1.2
HLA-DMA-201ENST00000374843 SLFN5Q08AF3 891 aa22.55■■□□□ 1.2
HLA-DMA-201ENST00000374843 CALD1Q05682 793 aaKnown RBP22.54■■□□□ 1.2
HLA-DMA-201ENST00000374843 UNC5CLQ8IV45 518 aa22.54■■□□□ 1.2
HLA-DMA-201ENST00000374843 CDCA7LQ96GN5 454 aa22.54■■□□□ 1.2
HLA-DMA-201ENST00000374843 C8orf37Q96NL8 207 aa22.54■■□□□ 1.2
HLA-DMA-201ENST00000374843 SPATA31A1Q5TZJ5 1347 aa22.54■■□□□ 1.2
HLA-DMA-201ENST00000374843 IL2RBP14784 551 aa22.53■■□□□ 1.2
HLA-DMA-201ENST00000374843 SPATA31A5Q5VU36 1347 aa22.53■■□□□ 1.2
HLA-DMA-201ENST00000374843 SPATA31A7Q8IWB4 1347 aa22.53■■□□□ 1.2
HLA-DMA-201ENST00000374843 GNAT3A8MTJ3 354 aa22.52■■□□□ 1.2
HLA-DMA-201ENST00000374843 AKAP4Q5JQC9 854 aa22.52■■□□□ 1.2
HLA-DMA-201ENST00000374843 DUSP27Q5VZP5 1158 aa22.52■■□□□ 1.2
HLA-DMA-201ENST00000374843 ZNF530Q6P9A1 599 aaPredicted RBP22.52■■□□□ 1.2
HLA-DMA-201ENST00000374843 NGLY1Q96IV0 654 aa22.52■■□□□ 1.2
HLA-DMA-201ENST00000374843 SPINK5Q9NQ38 1064 aaPredicted RBP22.52■■□□□ 1.2
HLA-DMA-201ENST00000374843 THRAP3Q9Y2W1 955 aaKnown RBP22.52■■□□□ 1.2
HLA-DMA-201ENST00000374843 CEMIPQ8WUJ3 1361 aa22.51■■□□□ 1.19
HLA-DMA-201ENST00000374843 VPS72Q15906 364 aa22.51■■□□□ 1.19
HLA-DMA-201ENST00000374843 SPG7Q9UQ90 795 aa22.51■■□□□ 1.19
HLA-DMA-201ENST00000374843 TNS2Q63HR2 1409 aa22.49■■□□□ 1.19
HLA-DMA-201ENST00000374843 MEX3CQ5U5Q3 659 aaKnown RBP22.49■■□□□ 1.19
HLA-DMA-201ENST00000374843 MRC1P22897 1456 aa22.48■■□□□ 1.19
HLA-DMA-201ENST00000374843 RTF1Q92541 710 aaKnown RBP22.48■■□□□ 1.19
HLA-DMA-201ENST00000374843 THUMPD2Q9BTF0 503 aaKnown RBP22.48■■□□□ 1.19
HLA-DMA-201ENST00000374843 CDCA7Q9BWT1 371 aaPredicted RBP22.48■■□□□ 1.19
HLA-DMA-201ENST00000374843 MYH16Q9H6N6 1097 aa22.48■■□□□ 1.19
HLA-DMA-201ENST00000374843 IFT57Q9NWB7 429 aa22.48■■□□□ 1.19
HLA-DMA-201ENST00000374843 ATRNO75882 1429 aa22.48■■□□□ 1.19
HLA-DMA-201ENST00000374843 ZNF853P0CG23 659 aa22.47■■□□□ 1.19
HLA-DMA-201ENST00000374843 C1orf141Q5JVX7 400 aa22.47■■□□□ 1.19
HLA-DMA-201ENST00000374843 BARGINQ6ZT62 677 aa22.47■■□□□ 1.19
HLA-DMA-201ENST00000374843 PCDH11XQ9BZA7 1347 aa22.47■■□□□ 1.19
HLA-DMA-201ENST00000374843 PCDH11YQ9BZA8 1340 aa22.47■■□□□ 1.19
HLA-DMA-201ENST00000374843 KDM6AO15550 1401 aaPredicted RBP22.47■■□□□ 1.19
HLA-DMA-201ENST00000374843 SCN11AQ9UI33 1791 aa22.46■■□□□ 1.19
HLA-DMA-201ENST00000374843 PHKG2P15735 406 aa22.46■■□□□ 1.19
HLA-DMA-201ENST00000374843 DCTN1Q14203 1278 aa22.46■■□□□ 1.19
HLA-DMA-201ENST00000374843 MCM10Q7L590 875 aa22.46■■□□□ 1.19
HLA-DMA-201ENST00000374843 USP21Q9UK80 565 aa22.46■■□□□ 1.19
HLA-DMA-201ENST00000374843 THSD7AQ9UPZ6 1657 aa22.46■■□□□ 1.19
HLA-DMA-201ENST00000374843 VIRMAQ69YN4 1812 aaKnown RBP22.45■■□□□ 1.19
HLA-DMA-201ENST00000374843 ZCRB1Q8TBF4 217 aaKnown RBP22.45■■□□□ 1.18
HLA-DMA-201ENST00000374843 AFF2P51816 1311 aa22.45■■□□□ 1.18
HLA-DMA-201ENST00000374843 FANCIQ9NVI1 1328 aa22.45■■□□□ 1.18
HLA-DMA-201ENST00000374843 SIPA1L3O60292 1781 aaPredicted RBP22.45■■□□□ 1.18
HLA-DMA-201ENST00000374843 CYP27B1O15528 508 aa22.44■■□□□ 1.18
HLA-DMA-201ENST00000374843 GLI3P10071 1580 aa22.44■■□□□ 1.18
HLA-DMA-201ENST00000374843 GNAI1P63096 354 aa22.44■■□□□ 1.18
HLA-DMA-201ENST00000374843 IFNL2Q8IZJ0 200 aa22.44■■□□□ 1.18
HLA-DMA-201ENST00000374843 IL17REQ8NFR9 667 aa22.44■■□□□ 1.18
HLA-DMA-201ENST00000374843 CFAP44Q96MT7 982 aa22.44■■□□□ 1.18
HLA-DMA-201ENST00000374843 USP35Q9P2H5 1018 aa22.44■■□□□ 1.18
HLA-DMA-201ENST00000374843 HSP90AB1P08238 724 aaKnown RBP22.42■■□□□ 1.18
HLA-DMA-201ENST00000374843 RNMTO43148 476 aaKnown RBP22.41■■□□□ 1.18
HLA-DMA-201ENST00000374843 NKX1-1Q15270 411 aaPredicted RBP22.41■■□□□ 1.18
HLA-DMA-201ENST00000374843 BABAM1Q9NWV8 329 aa22.41■■□□□ 1.18
HLA-DMA-201ENST00000374843 CHL1O00533 1208 aa22.4■■□□□ 1.18
HLA-DMA-201ENST00000374843 KDM3BQ7LBC6 1761 aa22.4■■□□□ 1.18
HLA-DMA-201ENST00000374843 DCAF5Q96JK2 942 aa22.39■■□□□ 1.17
HLA-DMA-201ENST00000374843 TOGARAM1Q9Y4F4 1720 aa22.38■■□□□ 1.17
HLA-DMA-201ENST00000374843 MPRIPQ6WCQ1 1025 aa22.38■■□□□ 1.17
HLA-DMA-201ENST00000374843 TSR2Q969E8 191 aaKnown RBP22.38■■□□□ 1.17
HLA-DMA-201ENST00000374843 LGR6Q9HBX8 967 aa22.38■■□□□ 1.17
HLA-DMA-201ENST00000374843 MBIPQ9NS73 344 aa22.38■■□□□ 1.17
HLA-DMA-201ENST00000374843 CT47B1P0C2W7 299 aaPredicted RBP22.37■■□□□ 1.17
HLA-DMA-201ENST00000374843 TRPC5Q9UL62 973 aaPredicted RBP22.37■■□□□ 1.17
HLA-DMA-201ENST00000374843 CCDC9Q9Y3X0 531 aaKnown RBP22.37■■□□□ 1.17
HLA-DMA-201ENST00000374843 TAF7Q15545 349 aaPredicted RBP22.35■■□□□ 1.17
HLA-DMA-201ENST00000374843 GJD4Q96KN9 370 aaPredicted RBP22.34■■□□□ 1.17
HLA-DMA-201ENST00000374843 PAPPAQ13219 1627 aa22.33■■□□□ 1.17
HLA-DMA-201ENST00000374843 EXOC5O00471 708 aa22.33■■□□□ 1.17
HLA-DMA-201ENST00000374843 TEFQ10587 303 aa22.33■■□□□ 1.17
HLA-DMA-201ENST00000374843 RCAN3Q9UKA8 241 aa22.33■■□□□ 1.17
HLA-DMA-201ENST00000374843 LAS1LQ9Y4W2 734 aaKnown RBP22.33■■□□□ 1.17
HLA-DMA-201ENST00000374843 RNF123Q5XPI4 1314 aa22.32■■□□□ 1.16
HLA-DMA-201ENST00000374843 DDB1Q16531 1140 aa22.32■■□□□ 1.16
HLA-DMA-201ENST00000374843 SLC52A2Q9HAB3 445 aa22.32■■□□□ 1.16
HLA-DMA-201ENST00000374843 TSPYL4Q9UJ04 414 aa22.32■■□□□ 1.16
HLA-DMA-201ENST00000374843 ERVV-2B6SEH9 535 aa22.31■■□□□ 1.16
HLA-DMA-201ENST00000374843 EXOSC9Q06265 439 aaKnown RBP22.31■■□□□ 1.16
HLA-DMA-201ENST00000374843 FAM98CQ17RN3 349 aaKnown RBP22.31■■□□□ 1.16
HLA-DMA-201ENST00000374843 ONECUT3O60422 494 aaPredicted RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms