RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 SLC4A10Q6U841 1118 aa23.02■■□□□ 1.28
RXRB-202ENST00000374685 APBB1O00213 710 aa23.01■■□□□ 1.27
RXRB-202ENST00000374685 SLC4A2P04920 1241 aa23.01■■□□□ 1.27
RXRB-202ENST00000374685 XRN1Q8IZH2 1706 aaKnown RBP23.01■■□□□ 1.27
RXRB-202ENST00000374685 PIK3C2AO00443 1686 aa23.01■■□□□ 1.27
RXRB-202ENST00000374685 API5Q9BZZ5 524 aaKnown RBP23■■□□□ 1.27
RXRB-202ENST00000374685 MFAP1P55081 439 aaKnown RBP23■■□□□ 1.27
RXRB-202ENST00000374685 ARHGEF10O15013 1369 aa22.99■■□□□ 1.27
RXRB-202ENST00000374685 IGSF1Q8N6C5 1336 aa22.99■■□□□ 1.27
RXRB-202ENST00000374685 F6X3S4 739 aa22.99■■□□□ 1.27
RXRB-202ENST00000374685 PROSER2Q86WR7 435 aaPredicted RBP22.99■■□□□ 1.27
RXRB-202ENST00000374685 USP19O94966 1318 aa22.98■■□□□ 1.27
RXRB-202ENST00000374685 SMC5Q8IY18 1101 aa22.98■■□□□ 1.27
RXRB-202ENST00000374685 UPF2Q9HAU5 1272 aaKnown RBP22.98■■□□□ 1.27
RXRB-202ENST00000374685 ARHGAP45Q92619 1136 aa22.98■■□□□ 1.27
RXRB-202ENST00000374685 LRRC59Q96AG4 307 aaKnown RBP22.98■■□□□ 1.27
RXRB-202ENST00000374685 PIK3R4Q99570 1358 aa22.98■■□□□ 1.27
RXRB-202ENST00000374685 ANKARQ7Z5J8 1434 aa22.97■■□□□ 1.27
RXRB-202ENST00000374685 GAS2L2Q8NHY3 880 aa22.97■■□□□ 1.27
RXRB-202ENST00000374685 ABCC4O15439 1325 aa22.97■■□□□ 1.27
RXRB-202ENST00000374685 BRPF1P55201 1214 aaPredicted RBP22.96■■□□□ 1.27
RXRB-202ENST00000374685 G2E3Q7L622 706 aa22.96■■□□□ 1.27
RXRB-202ENST00000374685 SIRT2Q8IXJ6 389 aa22.96■■□□□ 1.27
RXRB-202ENST00000374685 NALCNQ8IZF0 1738 aa22.96■■□□□ 1.27
RXRB-202ENST00000374685 CHD1LQ86WJ1 897 aa22.95■■□□□ 1.26
RXRB-202ENST00000374685 GNAT3A8MTJ3 354 aa22.95■■□□□ 1.26
RXRB-202ENST00000374685 DDX17Q92841 729 aaKnown RBP22.94■■□□□ 1.26
RXRB-202ENST00000374685 NBPF6Q5VWK0 638 aa22.93■■□□□ 1.26
RXRB-202ENST00000374685 NBPF4Q96M43 638 aa22.93■■□□□ 1.26
RXRB-202ENST00000374685 NPHP4O75161 1426 aaPredicted RBP22.93■■□□□ 1.26
RXRB-202ENST00000374685 CRB1P82279 1406 aa22.93■■□□□ 1.26
RXRB-202ENST00000374685 NUCB1Q02818 461 aa22.93■■□□□ 1.26
RXRB-202ENST00000374685 SPRYD3Q8NCJ5 442 aa22.92■■□□□ 1.26
RXRB-202ENST00000374685 IL17REQ8NFR9 667 aa22.92■■□□□ 1.26
RXRB-202ENST00000374685 FMN2Q9NZ56 1722 aa22.91■■□□□ 1.26
RXRB-202ENST00000374685 MEIS3Q99687 375 aa22.91■■□□□ 1.26
RXRB-202ENST00000374685 KDRP35968 1356 aa22.9■■□□□ 1.26
RXRB-202ENST00000374685 SLKQ9H2G2 1235 aaPredicted RBP22.9■■□□□ 1.26
RXRB-202ENST00000374685 CHMP4BQ9H444 224 aaKnown RBP22.89■■□□□ 1.26
RXRB-202ENST00000374685 MSH6P52701 1360 aa22.88■■□□□ 1.25
RXRB-202ENST00000374685 HAP1P54257 671 aaPredicted RBP22.88■■□□□ 1.25
RXRB-202ENST00000374685 ZC3H6P61129 1189 aaKnown RBP22.88■■□□□ 1.25
RXRB-202ENST00000374685 STK31Q9BXU1 1019 aa22.88■■□□□ 1.25
RXRB-202ENST00000374685 ADGRL3Q9HAR2 1447 aa22.88■■□□□ 1.25
RXRB-202ENST00000374685 RGPD1P0DJD0 1748 aa22.88■■□□□ 1.25
RXRB-202ENST00000374685 GCP02774 474 aa22.87■■□□□ 1.25
RXRB-202ENST00000374685 EIF2S2P20042 333 aaKnown RBP22.87■■□□□ 1.25
RXRB-202ENST00000374685 IP6K1Q92551 441 aa22.87■■□□□ 1.25
RXRB-202ENST00000374685 CHD2O14647 1828 aaKnown RBP22.87■■□□□ 1.25
RXRB-202ENST00000374685 EIF5BO60841 1220 aaKnown RBP22.87■■□□□ 1.25
RXRB-202ENST00000374685 HSPA2P54652 639 aa22.87■■□□□ 1.25
RXRB-202ENST00000374685 FKBP5Q13451 457 aaPredicted RBP22.87■■□□□ 1.25
RXRB-202ENST00000374685 BRPF3Q9ULD4 1205 aa22.87■■□□□ 1.25
RXRB-202ENST00000374685 LGR6Q9HBX8 967 aa22.86■■□□□ 1.25
RXRB-202ENST00000374685 PKNOX2Q96KN3 472 aa22.85■■□□□ 1.25
RXRB-202ENST00000374685 MPRIPQ6WCQ1 1025 aa22.85■■□□□ 1.25
RXRB-202ENST00000374685 KRT28Q7Z3Y7 464 aa22.85■■□□□ 1.25
RXRB-202ENST00000374685 C16orf71Q8IYS4 520 aaPredicted RBP22.85■■□□□ 1.25
RXRB-202ENST00000374685 GCC1Q96CN9 775 aa22.85■■□□□ 1.25
RXRB-202ENST00000374685 KIAA0232Q92628 1395 aa22.85■■□□□ 1.25
RXRB-202ENST00000374685 MAP3K5Q99683 1374 aa22.84■■□□□ 1.25
RXRB-202ENST00000374685 SMARCA5O60264 1052 aaPredicted RBP22.84■■□□□ 1.25
RXRB-202ENST00000374685 TBC1D32Q96NH3 1257 aa22.84■■□□□ 1.25
RXRB-202ENST00000374685 INTS3Q68E01 1043 aaKnown RBP22.84■■□□□ 1.25
RXRB-202ENST00000374685 C22orf23Q9BZE7 217 aa22.83■■□□□ 1.24
RXRB-202ENST00000374685 TAF7Q15545 349 aaPredicted RBP22.82■■□□□ 1.24
RXRB-202ENST00000374685 KCNH5Q8NCM2 988 aa22.82■■□□□ 1.24
RXRB-202ENST00000374685 ZNF530Q6P9A1 599 aaPredicted RBP22.82■■□□□ 1.24
RXRB-202ENST00000374685 ADAMTSL3P82987 1691 aa22.82■■□□□ 1.24
RXRB-202ENST00000374685 RGS12O14924 1447 aa22.81■■□□□ 1.24
RXRB-202ENST00000374685 KCNQ3O43525 872 aa22.81■■□□□ 1.24
RXRB-202ENST00000374685 CABLES1Q8TDN4 633 aa22.81■■□□□ 1.24
RXRB-202ENST00000374685 AXIN2Q9Y2T1 843 aa22.81■■□□□ 1.24
RXRB-202ENST00000374685 ANXA1P04083 346 aa22.8■■□□□ 1.24
RXRB-202ENST00000374685 FLIIQ13045 1269 aa22.8■■□□□ 1.24
RXRB-202ENST00000374685 BECN1Q14457 450 aa22.8■■□□□ 1.24
RXRB-202ENST00000374685 GSE1Q14687 1217 aa22.8■■□□□ 1.24
RXRB-202ENST00000374685 OTUD7AQ8TE49 926 aaPredicted RBP22.8■■□□□ 1.24
RXRB-202ENST00000374685 PTPRCP08575 1304 aa22.8■■□□□ 1.24
RXRB-202ENST00000374685 CEP85Q6P2H3 762 aa22.79■■□□□ 1.24
RXRB-202ENST00000374685 ANKRD24Q8TF21 1146 aa22.79■■□□□ 1.24
RXRB-202ENST00000374685 ATF3P18847 181 aa22.79■■□□□ 1.24
RXRB-202ENST00000374685 NFKBIBQ15653 356 aa22.79■■□□□ 1.24
RXRB-202ENST00000374685 HDGFL1Q5TGJ6 251 aa22.79■■□□□ 1.24
RXRB-202ENST00000374685 CCDC30Q5VVM6 783 aa22.79■■□□□ 1.24
RXRB-202ENST00000374685 VIRMAQ69YN4 1812 aaKnown RBP22.78■■□□□ 1.24
RXRB-202ENST00000374685 PHAXQ9H814 394 aaKnown RBP22.78■■□□□ 1.24
RXRB-202ENST00000374685 MARF1Q9Y4F3 1742 aaKnown RBP22.78■■□□□ 1.24
RXRB-202ENST00000374685 TEFQ10587 303 aa22.77■■□□□ 1.24
RXRB-202ENST00000374685 NWD1Q149M9 1564 aa22.77■■□□□ 1.23
RXRB-202ENST00000374685 C19orf44Q9H6X5 657 aa22.77■■□□□ 1.23
RXRB-202ENST00000374685 LTN1O94822 1766 aa22.76■■□□□ 1.23
RXRB-202ENST00000374685 ANKRD44Q8N8A2 993 aa22.76■■□□□ 1.23
RXRB-202ENST00000374685 RTL1A6NKG5 1358 aa22.76■■□□□ 1.23
RXRB-202ENST00000374685 TBC1D2Q9BYX2 928 aa22.76■■□□□ 1.23
RXRB-202ENST00000374685 ZNF142P52746 1687 aaPredicted RBP22.75■■□□□ 1.23
RXRB-202ENST00000374685 HTATSF1O43719 755 aaKnown RBP22.75■■□□□ 1.23
RXRB-202ENST00000374685 ARHGEF25Q86VW2 580 aa22.75■■□□□ 1.23
RXRB-202ENST00000374685 DCTPP1Q9H773 170 aa22.74■■□□□ 1.23
RXRB-202ENST00000374685 KIF24Q5T7B8 1368 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms