RNA–Protein interactions for RNA: ENST00000374607.5

PFDN6-202, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-202ENST00000374607 NEFMP07197 916 aa20.32■□□□□ 0.84
PFDN6-202ENST00000374607 WDR43Q15061 677 aaKnown RBP eCLIP20.32■□□□□ 0.84
PFDN6-202ENST00000374607 AEBP1Q8IUX7 1158 aa20.32■□□□□ 0.84
PFDN6-202ENST00000374607 MEGF6O75095 1541 aa20.32■□□□□ 0.84
PFDN6-202ENST00000374607 COL3A1P02461 1466 aaPredicted RBP20.31■□□□□ 0.84
PFDN6-202ENST00000374607 TNS2Q63HR2 1409 aa20.31■□□□□ 0.84
PFDN6-202ENST00000374607 PLEKHO1Q53GL0 409 aaPredicted RBP20.31■□□□□ 0.84
PFDN6-202ENST00000374607 FAM182BQ5T319 152 aa20.31■□□□□ 0.84
PFDN6-202ENST00000374607 LRRC37A3O60309 1634 aa20.31■□□□□ 0.84
PFDN6-202ENST00000374607 OVOS2A0A0G2JMS6 1433 aa20.3■□□□□ 0.84
PFDN6-202ENST00000374607 FAM196AQ6ZSG2 479 aa20.3■□□□□ 0.84
PFDN6-202ENST00000374607 PCDH11XQ9BZA7 1347 aa20.28■□□□□ 0.84
PFDN6-202ENST00000374607 PCDH11YQ9BZA8 1340 aa20.28■□□□□ 0.84
PFDN6-202ENST00000374607 AMOTQ4VCS5 1084 aa20.28■□□□□ 0.84
PFDN6-202ENST00000374607 PNNQ9H307 717 aaKnown RBP20.28■□□□□ 0.84
PFDN6-202ENST00000374607 NCAPD2Q15021 1401 aa20.27■□□□□ 0.84
PFDN6-202ENST00000374607 SF3B2Q13435 895 aaKnown RBP20.27■□□□□ 0.84
PFDN6-202ENST00000374607 MARCH10Q8NA82 808 aaPredicted RBP20.27■□□□□ 0.84
PFDN6-202ENST00000374607 MRS2Q9HD23 443 aa20.27■□□□□ 0.84
PFDN6-202ENST00000374607 RGPD1P0DJD0 1748 aa20.27■□□□□ 0.83
PFDN6-202ENST00000374607 KDRP35968 1356 aa20.26■□□□□ 0.83
PFDN6-202ENST00000374607 C1orf141Q5JVX7 400 aa20.26■□□□□ 0.83
PFDN6-202ENST00000374607 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.26■□□□□ 0.834e-8■■□□□ 13.1
PFDN6-202ENST00000374607 FCHSD2O94868 740 aa20.25■□□□□ 0.83
PFDN6-202ENST00000374607 PRKAR2BP31323 418 aa20.25■□□□□ 0.83
PFDN6-202ENST00000374607 ZNF530Q6P9A1 599 aaPredicted RBP20.24■□□□□ 0.83
PFDN6-202ENST00000374607 IFNL2Q8IZJ0 200 aa20.24■□□□□ 0.83
PFDN6-202ENST00000374607 PLEKHG2Q9H7P9 1386 aa20.22■□□□□ 0.83
PFDN6-202ENST00000374607 CCDC125Q86Z20 511 aa20.22■□□□□ 0.83
PFDN6-202ENST00000374607 RSPH6AQ9H0K4 717 aa20.22■□□□□ 0.83
PFDN6-202ENST00000374607 MAPK8IP3Q9UPT6 1336 aa20.22■□□□□ 0.83
PFDN6-202ENST00000374607 EP400Q96L91 3159 aa20.22■□□□□ 0.83
PFDN6-202ENST00000374607 TRIM37O94972 964 aa20.21■□□□□ 0.83
PFDN6-202ENST00000374607 HSP90AB1P08238 724 aaKnown RBP20.21■□□□□ 0.83
PFDN6-202ENST00000374607 SYTL4Q96C24 671 aaPredicted RBP20.21■□□□□ 0.83
PFDN6-202ENST00000374607 ACSBG1Q96GR2 724 aa20.21■□□□□ 0.83
PFDN6-202ENST00000374607 GAS2L2Q8NHY3 880 aa20.2■□□□□ 0.82
PFDN6-202ENST00000374607 PKD1L3Q7Z443 1732 aa20.19■□□□□ 0.82
PFDN6-202ENST00000374607 CYP27B1O15528 508 aa20.19■□□□□ 0.82
PFDN6-202ENST00000374607 PHKG2P15735 406 aa20.19■□□□□ 0.82
PFDN6-202ENST00000374607 MTHFSDQ2M296 383 aaKnown RBP20.18■□□□□ 0.82
PFDN6-202ENST00000374607 CCDC184Q52MB2 194 aa20.17■□□□□ 0.82
PFDN6-202ENST00000374607 AKAP4Q5JQC9 854 aa20.17■□□□□ 0.82
PFDN6-202ENST00000374607 ADAMTS8Q9UP79 889 aa20.17■□□□□ 0.82
PFDN6-202ENST00000374607 SHANK3Q9BYB0 1731 aa20.16■□□□□ 0.82
PFDN6-202ENST00000374607 CCDC146Q8IYE0 955 aa20.15■□□□□ 0.82
PFDN6-202ENST00000374607 PHACTR3Q96KR7 559 aa20.15■□□□□ 0.82
PFDN6-202ENST00000374607 APBA3O96018 575 aa20.14■□□□□ 0.81
PFDN6-202ENST00000374607 PRIM1P49642 420 aaKnown RBP20.14■□□□□ 0.81
PFDN6-202ENST00000374607 RTF1Q92541 710 aaKnown RBP20.14■□□□□ 0.81
PFDN6-202ENST00000374607 DCAF5Q96JK2 942 aa20.14■□□□□ 0.81
PFDN6-202ENST00000374607 BCL11BQ9C0K0 894 aaPredicted RBP20.14■□□□□ 0.81
PFDN6-202ENST00000374607 BCL9O00512 1426 aa20.13■□□□□ 0.81
PFDN6-202ENST00000374607 GNAT3A8MTJ3 354 aa20.13■□□□□ 0.81
PFDN6-202ENST00000374607 BAG6P46379 1132 aa20.13■□□□□ 0.81
PFDN6-202ENST00000374607 NKX1-1Q15270 411 aaPredicted RBP20.13■□□□□ 0.81
PFDN6-202ENST00000374607 MPRIPQ6WCQ1 1025 aa20.13■□□□□ 0.81
PFDN6-202ENST00000374607 FAM9BQ8IZU0 186 aa20.13■□□□□ 0.81
PFDN6-202ENST00000374607 RUNDC1Q96C34 613 aa20.13■□□□□ 0.81
PFDN6-202ENST00000374607 KAT6BQ8WYB5 2073 aa20.13■□□□□ 0.81
PFDN6-202ENST00000374607 KCNQ2O43526 872 aa20.12■□□□□ 0.81
PFDN6-202ENST00000374607 CABP4P57796 275 aa20.11■□□□□ 0.81
PFDN6-202ENST00000374607 MIER1Q8N108 512 aa20.11■□□□□ 0.81
PFDN6-202ENST00000374607 PLEKHF1Q96S99 279 aa20.11■□□□□ 0.81
PFDN6-202ENST00000374607 TMOD3Q9NYL9 352 aa20.11■□□□□ 0.81
PFDN6-202ENST00000374607 MAP3K5Q99683 1374 aa20.1■□□□□ 0.81
PFDN6-202ENST00000374607 CCER2I3L3R5 266 aa20.1■□□□□ 0.81
PFDN6-202ENST00000374607 PNISRQ8TF01 805 aaKnown RBP20.1■□□□□ 0.81
PFDN6-202ENST00000374607 DOT1LQ8TEK3 1739 aa20.1■□□□□ 0.81
PFDN6-202ENST00000374607 NFE2L2Q16236 605 aa20.09■□□□□ 0.81
PFDN6-202ENST00000374607 DEFB132Q7Z7B7 95 aa20.09■□□□□ 0.81
PFDN6-202ENST00000374607 SBF2Q86WG5 1849 aa20.09■□□□□ 0.81
PFDN6-202ENST00000374607 ERVV-2B6SEH9 535 aa20.08■□□□□ 0.81
PFDN6-202ENST00000374607 NEUROD2Q15784 382 aa20.08■□□□□ 0.81
PFDN6-202ENST00000374607 NHSQ6T4R5 1651 aa20.07■□□□□ 0.8
PFDN6-202ENST00000374607 RNMTO43148 476 aaKnown RBP20.07■□□□□ 0.8
PFDN6-202ENST00000374607 TEFQ10587 303 aa20.07■□□□□ 0.8
PFDN6-202ENST00000374607 RIPK4P57078 832 aa20.06■□□□□ 0.8
PFDN6-202ENST00000374607 PTF1AQ7RTS3 328 aa20.06■□□□□ 0.8
PFDN6-202ENST00000374607 LGR6Q9HBX8 967 aa20.06■□□□□ 0.8
PFDN6-202ENST00000374607 EN1Q05925 392 aaPredicted RBP20.05■□□□□ 0.8
PFDN6-202ENST00000374607 LMOD3Q0VAK6 560 aa20.05■□□□□ 0.8
PFDN6-202ENST00000374607 RRP7AQ9Y3A4 280 aaKnown RBP20.05■□□□□ 0.8
PFDN6-202ENST00000374607 HTATSF1O43719 755 aaKnown RBP20.04■□□□□ 0.8
PFDN6-202ENST00000374607 TMPOP42166 694 aaKnown RBP20.04■□□□□ 0.8
PFDN6-202ENST00000374607 NFATC2IPQ8NCF5 419 aa20.04■□□□□ 0.8
PFDN6-202ENST00000374607 KDM6AO15550 1401 aaPredicted RBP20.03■□□□□ 0.8
PFDN6-202ENST00000374607 MCM10Q7L590 875 aa20.03■□□□□ 0.8
PFDN6-202ENST00000374607 PIGBQ92521 554 aa20.03■□□□□ 0.8
PFDN6-202ENST00000374607 TNS1Q9HBL0 1735 aaKnown RBP20.02■□□□□ 0.8
PFDN6-202ENST00000374607 APAF1O14727 1248 aa20.02■□□□□ 0.8
PFDN6-202ENST00000374607 SMARCC1Q92922 1105 aaPredicted RBP20.02■□□□□ 0.8
PFDN6-202ENST00000374607 SLC52A2Q9HAB3 445 aa20.02■□□□□ 0.8
PFDN6-202ENST00000374607 TOGARAM1Q9Y4F4 1720 aa20.02■□□□□ 0.79
PFDN6-202ENST00000374607 PLSCR1O15162 318 aa20.01■□□□□ 0.79
PFDN6-202ENST00000374607 DCTN1Q14203 1278 aa20.01■□□□□ 0.79
PFDN6-202ENST00000374607 EZH2Q15910 746 aaKnown RBP20.01■□□□□ 0.79
PFDN6-202ENST00000374607 IL17REQ8NFR9 667 aa20.01■□□□□ 0.79
PFDN6-202ENST00000374607 BTAF1O14981 1849 aa20.01■□□□□ 0.79
PFDN6-202ENST00000374607 SCN11AQ9UI33 1791 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms