RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 WWC1Q8IX03 1113 aa7.56□□□□□ -1.2
PTPN3-202ENST00000374541 NPHP4O75161 1426 aaPredicted RBP7.56□□□□□ -1.2
PTPN3-202ENST00000374541 FAM43AQ8N2R8 423 aa7.56□□□□□ -1.2
PTPN3-202ENST00000374541 RIMBP3CA6NJZ7 1639 aa7.56□□□□□ -1.2
PTPN3-202ENST00000374541 RIMBP3BA6NNM3 1639 aa7.56□□□□□ -1.2
PTPN3-202ENST00000374541 RIMBP3Q9UFD9 1639 aa7.56□□□□□ -1.2
PTPN3-202ENST00000374541 ZKSCAN1P17029 563 aaPredicted RBP7.56□□□□□ -1.2
PTPN3-202ENST00000374541 TMEM132AQ24JP5 1023 aa7.56□□□□□ -1.2
PTPN3-202ENST00000374541 PCF11O94913 1555 aaKnown RBP7.55□□□□□ -1.2
PTPN3-202ENST00000374541 SHROOM2Q13796 1616 aa7.55□□□□□ -1.2
PTPN3-202ENST00000374541 RIMS2Q9UQ26 1411 aa7.55□□□□□ -1.2
PTPN3-202ENST00000374541 FAM83GA6ND36 823 aa7.55□□□□□ -1.2
PTPN3-202ENST00000374541 CA8P35219 290 aa7.55□□□□□ -1.2
PTPN3-202ENST00000374541 ANKRD24Q8TF21 1146 aa7.55□□□□□ -1.2
PTPN3-202ENST00000374541 CCDC173Q0VFZ6 552 aa7.55□□□□□ -1.2
PTPN3-202ENST00000374541 HOMER1Q86YM7 354 aa7.55□□□□□ -1.2
PTPN3-202ENST00000374541 JCADQ9P266 1359 aa7.55□□□□□ -1.2
PTPN3-202ENST00000374541 CCDC39Q9UFE4 941 aa7.55□□□□□ -1.2
PTPN3-202ENST00000374541 USHBP1Q8N6Y0 703 aa7.55□□□□□ -1.2
PTPN3-202ENST00000374541 MTMR7Q9Y216 660 aa7.55□□□□□ -1.2
PTPN3-202ENST00000374541 CASKIN1Q8WXD9 1431 aa7.54□□□□□ -1.2
PTPN3-202ENST00000374541 ABCC10Q5T3U5 1492 aa7.54□□□□□ -1.2
PTPN3-202ENST00000374541 ANKRD30BQ9BXX2 1392 aa7.54□□□□□ -1.2
PTPN3-202ENST00000374541 RPRD2Q5VT52 1461 aaKnown RBP7.54□□□□□ -1.2
PTPN3-202ENST00000374541 RNF20Q5VTR2 975 aa7.54□□□□□ -1.2
PTPN3-202ENST00000374541 UNC5CLQ8IV45 518 aa7.54□□□□□ -1.2
PTPN3-202ENST00000374541 PLCH2O75038 1416 aa7.54□□□□□ -1.2
PTPN3-202ENST00000374541 PDE4AP27815 886 aa7.54□□□□□ -1.2
PTPN3-202ENST00000374541 HMGN5P82970 282 aaKnown RBP7.54□□□□□ -1.2
PTPN3-202ENST00000374541 NAT10Q9H0A0 1025 aaKnown RBP7.54□□□□□ -1.2
PTPN3-202ENST00000374541 LETM1O95202 739 aaPredicted RBP7.53□□□□□ -1.2
PTPN3-202ENST00000374541 PDE4CQ08493 712 aa7.53□□□□□ -1.2
PTPN3-202ENST00000374541 FAM182BQ5T319 152 aa7.53□□□□□ -1.2
PTPN3-202ENST00000374541 BTBD11A6QL63 1104 aa7.53□□□□□ -1.2
PTPN3-202ENST00000374541 E9PSI1 815 aa7.53□□□□□ -1.2
PTPN3-202ENST00000374541 NEUROD6Q96NK8 337 aa7.53□□□□□ -1.2
PTPN3-202ENST00000374541 PRKAG2Q9UGJ0 569 aa7.53□□□□□ -1.2
PTPN3-202ENST00000374541 TBX22Q9Y458 520 aa7.53□□□□□ -1.2
PTPN3-202ENST00000374541 NAIPQ13075 1403 aa7.53□□□□□ -1.2
PTPN3-202ENST00000374541 MYBBP1AQ9BQG0 1328 aaKnown RBP7.53□□□□□ -1.2
PTPN3-202ENST00000374541 PATL2C9JE40 543 aaKnown RBP7.53□□□□□ -1.2
PTPN3-202ENST00000374541 WASLO00401 505 aaPredicted RBP7.53□□□□□ -1.2
PTPN3-202ENST00000374541 FKBP5Q13451 457 aaPredicted RBP7.53□□□□□ -1.2
PTPN3-202ENST00000374541 ZKSCAN2Q63HK3 967 aa7.53□□□□□ -1.2
PTPN3-202ENST00000374541 TEX13AQ9BXU3 409 aaPredicted RBP7.53□□□□□ -1.2
PTPN3-202ENST00000374541 ARHGEF10O15013 1369 aa7.53□□□□□ -1.2
PTPN3-202ENST00000374541 EP400NLQ6ZTU2 488 aa7.53□□□□□ -1.2
PTPN3-202ENST00000374541 IFNL2Q8IZJ0 200 aa7.53□□□□□ -1.2
PTPN3-202ENST00000374541 ZNF592Q92610 1267 aa7.53□□□□□ -1.2
PTPN3-202ENST00000374541 PCMTD1Q96MG8 357 aaPredicted RBP7.53□□□□□ -1.2
PTPN3-202ENST00000374541 R3HCC1Q9Y3T6 440 aaKnown RBP7.53□□□□□ -1.2
PTPN3-202ENST00000374541 ERCC6L2Q5T890 1561 aa7.53□□□□□ -1.2
PTPN3-202ENST00000374541 MRE11P49959 708 aa7.52□□□□□ -1.2
PTPN3-202ENST00000374541 CRACR2BQ8N4Y2 399 aaPredicted RBP7.52□□□□□ -1.2
PTPN3-202ENST00000374541 RRS1Q15050 365 aaKnown RBP7.52□□□□□ -1.21
PTPN3-202ENST00000374541 ZRSR2Q15696 482 aaKnown RBP7.52□□□□□ -1.21
PTPN3-202ENST00000374541 ORAI2Q96SN7 254 aa7.52□□□□□ -1.21
PTPN3-202ENST00000374541 CCDC73Q6ZRK6 1079 aa7.52□□□□□ -1.21
PTPN3-202ENST00000374541 CCDC125Q86Z20 511 aa7.52□□□□□ -1.21
PTPN3-202ENST00000374541 LARGE2Q8N3Y3 721 aa7.52□□□□□ -1.21
PTPN3-202ENST00000374541 OTUD7BQ6GQQ9 843 aa7.52□□□□□ -1.21
PTPN3-202ENST00000374541 SASS6Q6UVJ0 657 aa7.52□□□□□ -1.21
PTPN3-202ENST00000374541 PNISRQ8TF01 805 aaKnown RBP7.52□□□□□ -1.21
PTPN3-202ENST00000374541 L3MBTL2Q969R5 705 aa7.52□□□□□ -1.21
PTPN3-202ENST00000374541 FAM13BQ9NYF5 915 aa7.52□□□□□ -1.21
PTPN3-202ENST00000374541 H0YHG0 523 aa7.52□□□□□ -1.21
PTPN3-202ENST00000374541 H7C1D1 291 aa7.52□□□□□ -1.21
PTPN3-202ENST00000374541 NUTM1Q86Y26 1132 aa7.52□□□□□ -1.21
PTPN3-202ENST00000374541 SPATA31A6Q5VVP1 1343 aa7.52□□□□□ -1.21
PTPN3-202ENST00000374541 SULT6B1Q6IMI4 303 aa7.52□□□□□ -1.21
PTPN3-202ENST00000374541 ZNF428Q96B54 188 aa7.52□□□□□ -1.21
PTPN3-202ENST00000374541 AMOTQ4VCS5 1084 aa7.51□□□□□ -1.21
PTPN3-202ENST00000374541 PPP1R42Q7Z4L9 355 aa7.51□□□□□ -1.21
PTPN3-202ENST00000374541 CAVIN1Q6NZI2 390 aaKnown RBP7.51□□□□□ -1.21
PTPN3-202ENST00000374541 KDM2BQ8NHM5 1336 aa7.51□□□□□ -1.21
PTPN3-202ENST00000374541 DDX19BQ9UMR2 479 aa7.51□□□□□ -1.21
PTPN3-202ENST00000374541 KIF7Q2M1P5 1343 aa7.51□□□□□ -1.21
PTPN3-202ENST00000374541 CPLX1O14810 134 aa7.51□□□□□ -1.21
PTPN3-202ENST00000374541 USP8P40818 1118 aa7.51□□□□□ -1.21
PTPN3-202ENST00000374541 VEZTQ9HBM0 779 aa7.51□□□□□ -1.21
PTPN3-202ENST00000374541 GOLGA6L7A0A1B0GV03 622 aa7.51□□□□□ -1.21
PTPN3-202ENST00000374541 PIP4K2AP48426 406 aaPredicted RBP7.51□□□□□ -1.21
PTPN3-202ENST00000374541 HSP90AB3PQ58FF7 597 aa7.51□□□□□ -1.21
PTPN3-202ENST00000374541 NIM1KQ8IY84 436 aa7.51□□□□□ -1.21
PTPN3-202ENST00000374541 G3BP1Q13283 466 aaKnown RBP eCLIP7.5□□□□□ -1.21
PTPN3-202ENST00000374541 BICD2Q8TD16 824 aa7.5□□□□□ -1.21
PTPN3-202ENST00000374541 FEZ1Q99689 392 aa7.5□□□□□ -1.21
PTPN3-202ENST00000374541 FOXD4L1Q9NU39 408 aa7.5□□□□□ -1.21
PTPN3-202ENST00000374541 CHD1O14646 1710 aa7.5□□□□□ -1.21
PTPN3-202ENST00000374541 MAP3K1Q13233 1512 aa7.5□□□□□ -1.21
PTPN3-202ENST00000374541 HSP90AB4PQ58FF6 505 aa7.5□□□□□ -1.21
PTPN3-202ENST00000374541 CCDC146Q8IYE0 955 aa7.5□□□□□ -1.21
PTPN3-202ENST00000374541 API5Q9BZZ5 524 aaKnown RBP7.5□□□□□ -1.21
PTPN3-202ENST00000374541 PANK3Q9H999 370 aa7.5□□□□□ -1.21
PTPN3-202ENST00000374541 KDM4FA0A1W2PPD8 638 aa7.5□□□□□ -1.21
PTPN3-202ENST00000374541 NEO1Q92859 1461 aa7.5□□□□□ -1.21
PTPN3-202ENST00000374541 TIAM1Q13009 1591 aa7.5□□□□□ -1.21
PTPN3-202ENST00000374541 TXLNBQ8N3L3 684 aa7.5□□□□□ -1.21
PTPN3-202ENST00000374541 TRMT112Q9UI30 125 aaKnown RBP7.5□□□□□ -1.21
PTPN3-202ENST00000374541 ZBED9Q6R2W3 1325 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms