RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 ZHX3Q9H4I2 956 aa16.97■□□□□ 0.31
TRAF1-201ENST00000373887 GOLGA6L10A6NI86 522 aa16.96■□□□□ 0.31
TRAF1-201ENST00000373887 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.96■□□□□ 0.31
TRAF1-201ENST00000373887 ERC1Q8IUD2 1116 aa16.96■□□□□ 0.31
TRAF1-201ENST00000373887 PDCL3Q9H2J4 239 aa16.96■□□□□ 0.31
TRAF1-201ENST00000373887 TIAM1Q13009 1591 aa16.96■□□□□ 0.31
TRAF1-201ENST00000373887 ERLIN2O94905 339 aa16.96■□□□□ 0.31
TRAF1-201ENST00000373887 PDZRN3Q9UPQ7 1066 aa16.96■□□□□ 0.31
TRAF1-201ENST00000373887 STARD3NLO95772 234 aa16.96■□□□□ 0.3
TRAF1-201ENST00000373887 SERPINC1P01008 464 aa16.96■□□□□ 0.3
TRAF1-201ENST00000373887 KCNH5Q8NCM2 988 aa16.96■□□□□ 0.3
TRAF1-201ENST00000373887 IL1RAPL2Q9NP60 686 aa16.95■□□□□ 0.3
TRAF1-201ENST00000373887 LETM1O95202 739 aaPredicted RBP16.95■□□□□ 0.3
TRAF1-201ENST00000373887 PHF8Q9UPP1 1060 aa16.95■□□□□ 0.3
TRAF1-201ENST00000373887 CCDC181Q5TID7 509 aa16.95■□□□□ 0.3
TRAF1-201ENST00000373887 TANGO6Q9C0B7 1094 aa16.95■□□□□ 0.3
TRAF1-201ENST00000373887 PPP6R1Q9UPN7 881 aa16.95■□□□□ 0.3
TRAF1-201ENST00000373887 ATAD2Q6PL18 1390 aa16.95■□□□□ 0.3
TRAF1-201ENST00000373887 SRGAP3O43295 1099 aa16.95■□□□□ 0.3
TRAF1-201ENST00000373887 TXLNAP40222 546 aa16.94■□□□□ 0.3
TRAF1-201ENST00000373887 KIAA0754O94854 1291 aa16.94■□□□□ 0.3
TRAF1-201ENST00000373887 DEF6Q9H4E7 631 aa16.94■□□□□ 0.3
TRAF1-201ENST00000373887 BRPF3Q9ULD4 1205 aa16.94■□□□□ 0.3
TRAF1-201ENST00000373887 CAMSAP2Q08AD1 1489 aa16.94■□□□□ 0.3
TRAF1-201ENST00000373887 CCDC141Q6ZP82 1450 aa16.94■□□□□ 0.3
TRAF1-201ENST00000373887 PRXQ9BXM0 1461 aa16.94■□□□□ 0.3
TRAF1-201ENST00000373887 CCT4P50991 539 aaKnown RBP16.94■□□□□ 0.3
TRAF1-201ENST00000373887 CHRNA2Q15822 529 aa16.94■□□□□ 0.3
TRAF1-201ENST00000373887 LRRCC1Q9C099 1032 aa16.94■□□□□ 0.3
TRAF1-201ENST00000373887 CCP110O43303 1012 aa16.93■□□□□ 0.3
TRAF1-201ENST00000373887 IGHMBP2P38935 993 aaKnown RBP16.93■□□□□ 0.3
TRAF1-201ENST00000373887 STK38Q15208 465 aa16.93■□□□□ 0.3
TRAF1-201ENST00000373887 ABCF2Q9UG63 623 aa16.93■□□□□ 0.3
TRAF1-201ENST00000373887 ANKRD30BQ9BXX2 1392 aa16.93■□□□□ 0.3
TRAF1-201ENST00000373887 MAPK8IP2Q13387 824 aaPredicted RBP16.93■□□□□ 0.3
TRAF1-201ENST00000373887 KIF14Q15058 1648 aa16.93■□□□□ 0.3
TRAF1-201ENST00000373887 MPHOSPH10O00566 681 aaKnown RBP16.92■□□□□ 0.3
TRAF1-201ENST00000373887 NEK4P51957 841 aa16.92■□□□□ 0.3
TRAF1-201ENST00000373887 MTERF4Q7Z6M4 381 aaKnown RBP16.92■□□□□ 0.3
TRAF1-201ENST00000373887 KRT28Q7Z3Y7 464 aa16.92■□□□□ 0.3
TRAF1-201ENST00000373887 SEPT11Q9NVA2 429 aaKnown RBP16.92■□□□□ 0.3
TRAF1-201ENST00000373887 LRP2BPQ9P2M1 347 aa16.92■□□□□ 0.3
TRAF1-201ENST00000373887 EMILIN1Q9Y6C2 1016 aa16.92■□□□□ 0.3
TRAF1-201ENST00000373887 PAXIP1Q6ZW49 1069 aaPredicted RBP16.92■□□□□ 0.3
TRAF1-201ENST00000373887 ZNHIT6Q9NWK9 470 aaKnown RBP16.92■□□□□ 0.3
TRAF1-201ENST00000373887 IDI1Q13907 227 aa16.92■□□□□ 0.3
TRAF1-201ENST00000373887 MYD88Q99836 296 aa16.92■□□□□ 0.3
TRAF1-201ENST00000373887 PCF11O94913 1555 aaKnown RBP16.91■□□□□ 0.3
TRAF1-201ENST00000373887 IDH1O75874 414 aaKnown RBP16.91■□□□□ 0.3
TRAF1-201ENST00000373887 ANKIB1Q9P2G1 1089 aa16.91■□□□□ 0.3
TRAF1-201ENST00000373887 ADGRF5Q8IZF2 1346 aa16.91■□□□□ 0.3
TRAF1-201ENST00000373887 GRIN2AQ12879 1464 aa16.91■□□□□ 0.3
TRAF1-201ENST00000373887 ZNF608Q9ULD9 1512 aaPredicted RBP16.91■□□□□ 0.3
TRAF1-201ENST00000373887 LAMC3Q9Y6N6 1575 aa16.91■□□□□ 0.3
TRAF1-201ENST00000373887 ZNF396Q96N95 335 aaPredicted RBP16.9■□□□□ 0.3
TRAF1-201ENST00000373887 ANKRD18AQ8IVF6 992 aa16.9■□□□□ 0.3
TRAF1-201ENST00000373887 TDO2P48775 406 aa16.9■□□□□ 0.3
TRAF1-201ENST00000373887 PPFIBP1Q86W92 1011 aa16.9■□□□□ 0.3
TRAF1-201ENST00000373887 NUTM1Q86Y26 1132 aa16.9■□□□□ 0.3
TRAF1-201ENST00000373887 CCDC69A6NI79 296 aa16.9■□□□□ 0.3
TRAF1-201ENST00000373887 NACAP1Q9BZK3 213 aa16.9■□□□□ 0.3
TRAF1-201ENST00000373887 CHMP4BP1P59074 171 aa16.89■□□□□ 0.29
TRAF1-201ENST00000373887 METTL24Q5JXM2 366 aa16.89■□□□□ 0.29
TRAF1-201ENST00000373887 CEP126Q9P2H0 1117 aa16.89■□□□□ 0.29
TRAF1-201ENST00000373887 WWC3Q9ULE0 1092 aa16.89■□□□□ 0.29
TRAF1-201ENST00000373887 GPTP24298 496 aa16.89■□□□□ 0.29
TRAF1-201ENST00000373887 UBAP1LF5GYI3 381 aa16.88■□□□□ 0.29
TRAF1-201ENST00000373887 DUSP27Q5VZP5 1158 aa16.88■□□□□ 0.29
TRAF1-201ENST00000373887 CWC27Q6UX04 472 aaKnown RBP16.88■□□□□ 0.29
TRAF1-201ENST00000373887 NFE2L2Q16236 605 aa16.88■□□□□ 0.29
TRAF1-201ENST00000373887 GOLGA6L7A0A1B0GV03 622 aa16.88■□□□□ 0.29
TRAF1-201ENST00000373887 ERICH4A6NGS2 130 aa16.88■□□□□ 0.29
TRAF1-201ENST00000373887 HIP1O00291 1037 aa16.88■□□□□ 0.29
TRAF1-201ENST00000373887 EXOC5O00471 708 aa16.87■□□□□ 0.29
TRAF1-201ENST00000373887 CCDC184Q52MB2 194 aa16.87■□□□□ 0.29
TRAF1-201ENST00000373887 CCDC97Q96F63 343 aaPredicted RBP16.87■□□□□ 0.29
TRAF1-201ENST00000373887 ABCA10Q8WWZ4 1543 aa16.87■□□□□ 0.29
TRAF1-201ENST00000373887 MBD3O95983 291 aa16.86■□□□□ 0.29
TRAF1-201ENST00000373887 TMPOP42166 694 aaKnown RBP16.86■□□□□ 0.29
TRAF1-201ENST00000373887 USP5P45974 858 aa16.86■□□□□ 0.29
TRAF1-201ENST00000373887 ACSBG1Q96GR2 724 aa16.86■□□□□ 0.29
TRAF1-201ENST00000373887 PKNOX2Q96KN3 472 aa16.86■□□□□ 0.29
TRAF1-201ENST00000373887 TNMDQ9H2S6 317 aa16.86■□□□□ 0.29
TRAF1-201ENST00000373887 FCHSD2O94868 740 aa16.86■□□□□ 0.29
TRAF1-201ENST00000373887 FBLN1P23142 703 aa16.86■□□□□ 0.29
TRAF1-201ENST00000373887 ZNF652Q9Y2D9 606 aa16.86■□□□□ 0.29
TRAF1-201ENST00000373887 WASLO00401 505 aaPredicted RBP16.86■□□□□ 0.29
TRAF1-201ENST00000373887 AKNAQ7Z591 1439 aa16.86■□□□□ 0.29
TRAF1-201ENST00000373887 TTLL12Q14166 644 aaPredicted RBP16.86■□□□□ 0.29
TRAF1-201ENST00000373887 ATF7IPQ6VMQ6 1270 aa16.86■□□□□ 0.29
TRAF1-201ENST00000373887 FANCAO15360 1455 aa16.86■□□□□ 0.29
TRAF1-201ENST00000373887 ME1P48163 572 aa16.85■□□□□ 0.29
TRAF1-201ENST00000373887 PIP4K2AP48426 406 aaPredicted RBP16.85■□□□□ 0.29
TRAF1-201ENST00000373887 LRRFIP2Q9Y608 721 aaKnown RBP16.85■□□□□ 0.29
TRAF1-201ENST00000373887 GCC1Q96CN9 775 aa16.85■□□□□ 0.29
TRAF1-201ENST00000373887 DENND4BO75064 1496 aaPredicted RBP16.84■□□□□ 0.29
TRAF1-201ENST00000373887 CCDC112Q8NEF3 446 aa16.84■□□□□ 0.29
TRAF1-201ENST00000373887 MYCNP04198 464 aaPredicted RBP16.84■□□□□ 0.29
TRAF1-201ENST00000373887 TAF3Q5VWG9 929 aa16.84■□□□□ 0.29
TRAF1-201ENST00000373887 C8orf37Q96NL8 207 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms