RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 NFAT5O94916 1531 aa18.25■□□□□ 0.51
HDAC8-204ENST00000373560 NLRP6P59044 892 aa18.25■□□□□ 0.51
HDAC8-204ENST00000373560 TFCP2L1Q9NZI6 479 aa18.25■□□□□ 0.51
HDAC8-204ENST00000373560 PCNTO95613 3336 aa18.25■□□□□ 0.51
HDAC8-204ENST00000373560 CSB-PGBD3P0DP91 1061 aa18.24■□□□□ 0.51
HDAC8-204ENST00000373560 CICQ96RK0 1608 aaPredicted RBP18.23■□□□□ 0.51
HDAC8-204ENST00000373560 CCDC7Q96M83 1385 aa18.22■□□□□ 0.51
HDAC8-204ENST00000373560 SOX12O15370 315 aa18.22■□□□□ 0.51
HDAC8-204ENST00000373560 ARHGEF25Q86VW2 580 aa18.22■□□□□ 0.51
HDAC8-204ENST00000373560 JMYQ8N9B5 988 aa18.22■□□□□ 0.51
HDAC8-204ENST00000373560 KDM2AQ9Y2K7 1162 aa18.22■□□□□ 0.51
HDAC8-204ENST00000373560 COL23A1Q86Y22 540 aaPredicted RBP18.21■□□□□ 0.51
HDAC8-204ENST00000373560 KLRG1Q96E93 195 aa18.21■□□□□ 0.51
HDAC8-204ENST00000373560 SLC27A3Q5K4L6 730 aa18.19■□□□□ 0.5
HDAC8-204ENST00000373560 USP54Q70EL1 1684 aa18.18■□□□□ 0.5
HDAC8-204ENST00000373560 NSD2O96028 1365 aa18.18■□□□□ 0.5
HDAC8-204ENST00000373560 TOGARAM1Q9Y4F4 1720 aa18.18■□□□□ 0.5
HDAC8-204ENST00000373560 TOMM70O94826 608 aa18.17■□□□□ 0.5
HDAC8-204ENST00000373560 NMRK2Q9NPI5 230 aa18.17■□□□□ 0.5
HDAC8-204ENST00000373560 C5P01031 1676 aa18.17■□□□□ 0.5
HDAC8-204ENST00000373560 IGSF1Q8N6C5 1336 aa18.17■□□□□ 0.5
HDAC8-204ENST00000373560 MKRN4PQ13434 485 aaPredicted RBP18.16■□□□□ 0.5
HDAC8-204ENST00000373560 CABP2Q9NPB3 220 aa18.16■□□□□ 0.5
HDAC8-204ENST00000373560 CD2APQ9Y5K6 639 aa18.16■□□□□ 0.5
HDAC8-204ENST00000373560 KIAA1551Q9HCM1 1747 aa18.15■□□□□ 0.5
HDAC8-204ENST00000373560 LTN1O94822 1766 aa18.15■□□□□ 0.5
HDAC8-204ENST00000373560 DCAF11Q8TEB1 546 aa18.14■□□□□ 0.49
HDAC8-204ENST00000373560 TAF1LQ8IZX4 1826 aa18.12■□□□□ 0.49
HDAC8-204ENST00000373560 SRPK2P78362 688 aaKnown RBP18.12■□□□□ 0.49
HDAC8-204ENST00000373560 IL2RBP14784 551 aa18.11■□□□□ 0.49
HDAC8-204ENST00000373560 CABP1Q9NZU7 370 aa18.11■□□□□ 0.49
HDAC8-204ENST00000373560 ERBB3P21860 1342 aa18.11■□□□□ 0.49
HDAC8-204ENST00000373560 N4BP2Q86UW6 1770 aaPredicted RBP18.09■□□□□ 0.49
HDAC8-204ENST00000373560 NLRP2Q9NX02 1062 aa18.09■□□□□ 0.49
HDAC8-204ENST00000373560 AMIGO3Q86WK7 504 aa18.08■□□□□ 0.48
HDAC8-204ENST00000373560 CCNL1Q9UK58 526 aaPredicted RBP18.08■□□□□ 0.48
HDAC8-204ENST00000373560 PKD1L3Q7Z443 1732 aa18.07■□□□□ 0.48
HDAC8-204ENST00000373560 HSPA1AP0DMV8 641 aaKnown RBP18.07■□□□□ 0.48
HDAC8-204ENST00000373560 HSPA1BP0DMV9 641 aaKnown RBP18.07■□□□□ 0.48
HDAC8-204ENST00000373560 PRIM1P49642 420 aaKnown RBP18.07■□□□□ 0.48
HDAC8-204ENST00000373560 SMIM5Q71RC9 77 aa18.07■□□□□ 0.48
HDAC8-204ENST00000373560 DDX54Q8TDD1 881 aaKnown RBP18.07■□□□□ 0.48
HDAC8-204ENST00000373560 SYTL4Q96C24 671 aaPredicted RBP18.07■□□□□ 0.48
HDAC8-204ENST00000373560 ANKRD36BQ8N2N9 1353 aa18.06■□□□□ 0.48
HDAC8-204ENST00000373560 TTC21BQ7Z4L5 1316 aa18.06■□□□□ 0.48
HDAC8-204ENST00000373560 RBM46Q8TBY0 533 aaKnown RBP18.06■□□□□ 0.48
HDAC8-204ENST00000373560 KIAA1210Q9ULL0 1709 aa18.06■□□□□ 0.48
HDAC8-204ENST00000373560 UBR3Q6ZT12 1888 aa18.05■□□□□ 0.48
HDAC8-204ENST00000373560 KCNH5Q8NCM2 988 aa18.05■□□□□ 0.48
HDAC8-204ENST00000373560 FAM208AQ9UK61 1670 aaKnown RBP18.04■□□□□ 0.48
HDAC8-204ENST00000373560 KIF13BQ9NQT8 1826 aa18.04■□□□□ 0.48
HDAC8-204ENST00000373560 C4BP0C0L5 1744 aa18.03■□□□□ 0.48
HDAC8-204ENST00000373560 PXDNLA1KZ92 1463 aa18.03■□□□□ 0.48
HDAC8-204ENST00000373560 RGPD2P0DJD1 1756 aa18.03■□□□□ 0.48
HDAC8-204ENST00000373560 MON2Q7Z3U7 1717 aa18.03■□□□□ 0.48
HDAC8-204ENST00000373560 KCPQ6ZWJ8 1503 aa18.03■□□□□ 0.48
HDAC8-204ENST00000373560 BRCA1P38398 1863 aaKnown RBP18.01■□□□□ 0.47
HDAC8-204ENST00000373560 ANKRD24Q8TF21 1146 aa18.01■□□□□ 0.47
HDAC8-204ENST00000373560 NBPF1Q3BBV0 1214 aa18■□□□□ 0.47
HDAC8-204ENST00000373560 TNRC6CQ9HCJ0 1690 aaKnown RBP17.99■□□□□ 0.47
HDAC8-204ENST00000373560 CENPJQ9HC77 1338 aaPredicted RBP17.98■□□□□ 0.47
HDAC8-204ENST00000373560 MEGF6O75095 1541 aa17.98■□□□□ 0.47
HDAC8-204ENST00000373560 FSTL1Q12841 308 aa17.97■□□□□ 0.47
HDAC8-204ENST00000373560 RBM42Q9BTD8 480 aaKnown RBP17.97■□□□□ 0.47
HDAC8-204ENST00000373560 USP47Q96K76 1375 aa17.95■□□□□ 0.46
HDAC8-204ENST00000373560 PHF14O94880 888 aa17.95■□□□□ 0.46
HDAC8-204ENST00000373560 TTC21AQ8NDW8 1320 aa17.95■□□□□ 0.46
HDAC8-204ENST00000373560 C16orf71Q8IYS4 520 aaPredicted RBP17.94■□□□□ 0.46
HDAC8-204ENST00000373560 BCS1LQ9Y276 419 aa17.93■□□□□ 0.46
HDAC8-204ENST00000373560 ARFGEF1Q9Y6D6 1849 aa17.93■□□□□ 0.46
HDAC8-204ENST00000373560 C10orf71Q711Q0 1435 aa17.92■□□□□ 0.46
HDAC8-204ENST00000373560 C9orf131Q5VYM1 1079 aa17.91■□□□□ 0.46
HDAC8-204ENST00000373560 ARHGAP27Q6ZUM4 889 aa17.91■□□□□ 0.46
HDAC8-204ENST00000373560 NME9Q86XW9 330 aa17.91■□□□□ 0.46
HDAC8-204ENST00000373560 USP31Q70CQ4 1352 aa17.91■□□□□ 0.46
HDAC8-204ENST00000373560 FAM161AQ3B820 660 aa17.9■□□□□ 0.46
HDAC8-204ENST00000373560 RRAGCQ9HB90 399 aa17.9■□□□□ 0.46
HDAC8-204ENST00000373560 PCDH10Q9P2E7 1040 aa17.9■□□□□ 0.46
HDAC8-204ENST00000373560 MAP2P11137 1827 aaKnown RBP17.9■□□□□ 0.46
HDAC8-204ENST00000373560 ITGB4P16144 1822 aa17.9■□□□□ 0.46
HDAC8-204ENST00000373560 KTN1Q86UP2 1357 aaKnown RBP17.9■□□□□ 0.46
HDAC8-204ENST00000373560 PALLDQ8WX93 1383 aa17.9■□□□□ 0.46
HDAC8-204ENST00000373560 SBF1O95248 1867 aa17.89■□□□□ 0.45
HDAC8-204ENST00000373560 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.89■□□□□ 0.45
HDAC8-204ENST00000373560 A0A0G2JLW4 131 aa17.89■□□□□ 0.45
HDAC8-204ENST00000373560 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.89■□□□□ 0.45
HDAC8-204ENST00000373560 FLAD1Q8NFF5 587 aa17.89■□□□□ 0.45
HDAC8-204ENST00000373560 LTV1Q96GA3 475 aaPredicted RBP17.89■□□□□ 0.45
HDAC8-204ENST00000373560 PLEKHG2Q9H7P9 1386 aa17.88■□□□□ 0.45
HDAC8-204ENST00000373560 STAC3Q96MF2 364 aa17.87■□□□□ 0.45
HDAC8-204ENST00000373560 CD163L1Q9NR16 1453 aa17.87■□□□□ 0.45
HDAC8-204ENST00000373560 AK7Q96M32 723 aa17.86■□□□□ 0.45
HDAC8-204ENST00000373560 ZNF692Q9BU19 519 aaPredicted RBP17.85■□□□□ 0.45
HDAC8-204ENST00000373560 RAB3GAP2Q9H2M9 1393 aa17.84■□□□□ 0.45
HDAC8-204ENST00000373560 SBNO2Q9Y2G9 1366 aa17.84■□□□□ 0.45
HDAC8-204ENST00000373560 SPDYE2BA6NHP3 402 aa17.84■□□□□ 0.45
HDAC8-204ENST00000373560 MMP10P09238 476 aa17.84■□□□□ 0.45
HDAC8-204ENST00000373560 SPDYE6P0CI01 402 aa17.84■□□□□ 0.45
HDAC8-204ENST00000373560 SPDYE2Q495Y8 402 aa17.84■□□□□ 0.45
HDAC8-204ENST00000373560 SMC1BQ8NDV3 1235 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms