RNA–Protein interactions for RNA: ENST00000373298.6

ITM2A-201, Transcript of integral membrane protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2A, Length 1,641 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2A-201ENST00000373298 USHBP1Q8N6Y0 703 aa12.89□□□□□ -0.35
ITM2A-201ENST00000373298 PLSCR2Q9NRY7 297 aa12.89□□□□□ -0.35
ITM2A-201ENST00000373298 ABCC6O95255 1503 aa12.89□□□□□ -0.35
ITM2A-201ENST00000373298 COL3A1P02461 1466 aaPredicted RBP12.89□□□□□ -0.35
ITM2A-201ENST00000373298 RTL1A6NKG5 1358 aa12.89□□□□□ -0.35
ITM2A-201ENST00000373298 EVA1CP58658 441 aa12.88□□□□□ -0.35
ITM2A-201ENST00000373298 EIF4A2Q14240 407 aaKnown RBP12.88□□□□□ -0.35
ITM2A-201ENST00000373298 NBPF6Q5VWK0 638 aa12.88□□□□□ -0.35
ITM2A-201ENST00000373298 NBPF4Q96M43 638 aa12.88□□□□□ -0.35
ITM2A-201ENST00000373298 BLMP54132 1417 aaPredicted RBP12.88□□□□□ -0.35
ITM2A-201ENST00000373298 WDR17Q8IZU2 1322 aa12.88□□□□□ -0.35
ITM2A-201ENST00000373298 CDK12Q9NYV4 1490 aaPredicted RBP12.88□□□□□ -0.35
ITM2A-201ENST00000373298 VPS72Q15906 364 aa12.88□□□□□ -0.35
ITM2A-201ENST00000373298 PELP1Q8IZL8 1130 aaKnown RBP12.88□□□□□ -0.35
ITM2A-201ENST00000373298 CSB-PGBD3P0DP91 1061 aa12.87□□□□□ -0.35
ITM2A-201ENST00000373298 RALBP1Q15311 655 aa12.87□□□□□ -0.35
ITM2A-201ENST00000373298 SPATA31A1Q5TZJ5 1347 aa12.87□□□□□ -0.35
ITM2A-201ENST00000373298 SPATA31A5Q5VU36 1347 aa12.87□□□□□ -0.35
ITM2A-201ENST00000373298 SPATA31A7Q8IWB4 1347 aa12.87□□□□□ -0.35
ITM2A-201ENST00000373298 IL13P35225 146 aa12.86□□□□□ -0.35
ITM2A-201ENST00000373298 ZNF772Q68DY9 489 aaPredicted RBP12.86□□□□□ -0.35
ITM2A-201ENST00000373298 TOM1L2Q6ZVM7 507 aa12.86□□□□□ -0.35
ITM2A-201ENST00000373298 GJD4Q96KN9 370 aaPredicted RBP12.86□□□□□ -0.35
ITM2A-201ENST00000373298 NLRP2Q9NX02 1062 aa12.86□□□□□ -0.35
ITM2A-201ENST00000373298 TRPC5Q9UL62 973 aaPredicted RBP12.86□□□□□ -0.35
ITM2A-201ENST00000373298 CCDC9Q9Y3X0 531 aaKnown RBP12.86□□□□□ -0.35
ITM2A-201ENST00000373298 FAM208AQ9UK61 1670 aaKnown RBP12.86□□□□□ -0.35
ITM2A-201ENST00000373298 KIF24Q5T7B8 1368 aa12.86□□□□□ -0.35
ITM2A-201ENST00000373298 CRB1P82279 1406 aa12.85□□□□□ -0.35
ITM2A-201ENST00000373298 DIEXFQ68CQ4 756 aaKnown RBP12.85□□□□□ -0.35
ITM2A-201ENST00000373298 EYA1Q99502 592 aa12.85□□□□□ -0.35
ITM2A-201ENST00000373298 RGPD1P0DJD0 1748 aa12.85□□□□□ -0.35
ITM2A-201ENST00000373298 FAM98CQ17RN3 349 aaKnown RBP12.84□□□□□ -0.35
ITM2A-201ENST00000373298 MYBBP1AQ9BQG0 1328 aaKnown RBP12.84□□□□□ -0.35
ITM2A-201ENST00000373298 AEBP1Q8IUX7 1158 aa12.84□□□□□ -0.35
ITM2A-201ENST00000373298 ANP32CO43423 234 aa12.83□□□□□ -0.36
ITM2A-201ENST00000373298 CARD10Q9BWT7 1032 aa12.83□□□□□ -0.36
ITM2A-201ENST00000373298 WNK3Q9BYP7 1800 aa12.83□□□□□ -0.36
ITM2A-201ENST00000373298 BRWD3Q6RI45 1802 aa12.82□□□□□ -0.36
ITM2A-201ENST00000373298 RBM6P78332 1123 aaKnown RBP12.81□□□□□ -0.36
ITM2A-201ENST00000373298 TCP11L2Q8N4U5 519 aa12.81□□□□□ -0.36
ITM2A-201ENST00000373298 MEGF6O75095 1541 aa12.81□□□□□ -0.36
ITM2A-201ENST00000373298 RGS12O14924 1447 aa12.8□□□□□ -0.36
ITM2A-201ENST00000373298 DIAPH1O60610 1272 aaKnown RBP12.8□□□□□ -0.36
ITM2A-201ENST00000373298 HMOX1P09601 288 aa12.8□□□□□ -0.36
ITM2A-201ENST00000373298 RXRBP28702 533 aa12.8□□□□□ -0.36
ITM2A-201ENST00000373298 NCAPD2Q15021 1401 aa12.8□□□□□ -0.36
ITM2A-201ENST00000373298 ILDR2Q71H61 639 aa12.8□□□□□ -0.36
ITM2A-201ENST00000373298 MIER1Q8N108 512 aa12.8□□□□□ -0.36
ITM2A-201ENST00000373298 THSD7AQ9UPZ6 1657 aa12.8□□□□□ -0.36
ITM2A-201ENST00000373298 DISP2A7MBM2 1401 aa12.8□□□□□ -0.36
ITM2A-201ENST00000373298 IGSF1Q8N6C5 1336 aa12.8□□□□□ -0.36
ITM2A-201ENST00000373298 ASTLQ6HA08 431 aaPredicted RBP12.8□□□□□ -0.36
ITM2A-201ENST00000373298 U2SURPO15042 1029 aaKnown RBP12.79□□□□□ -0.36
ITM2A-201ENST00000373298 ONECUT3O60422 494 aaPredicted RBP12.79□□□□□ -0.36
ITM2A-201ENST00000373298 FAM182BQ5T319 152 aa12.79□□□□□ -0.36
ITM2A-201ENST00000373298 SULT6B1Q6IMI4 303 aa12.79□□□□□ -0.36
ITM2A-201ENST00000373298 SEPT12Q8IYM1 358 aa12.79□□□□□ -0.36
ITM2A-201ENST00000373298 LRRC37A3O60309 1634 aa12.78□□□□□ -0.36
ITM2A-201ENST00000373298 BARGINQ6ZT62 677 aa12.77□□□□□ -0.36
ITM2A-201ENST00000373298 SHANK3Q9BYB0 1731 aa12.77□□□□□ -0.37
ITM2A-201ENST00000373298 A0A0G2JS52 829 aa12.77□□□□□ -0.37
ITM2A-201ENST00000373298 MYT1Q01538 1121 aa12.77□□□□□ -0.37
ITM2A-201ENST00000373298 MS4A3Q96HJ5 214 aa12.77□□□□□ -0.37
ITM2A-201ENST00000373298 CFAP53Q96M91 514 aa12.77□□□□□ -0.37
ITM2A-201ENST00000373298 PARP4Q9UKK3 1724 aaKnown RBP12.76□□□□□ -0.37
ITM2A-201ENST00000373298 KDRP35968 1356 aa12.76□□□□□ -0.37
ITM2A-201ENST00000373298 IL2RBP14784 551 aa12.76□□□□□ -0.37
ITM2A-201ENST00000373298 THRAP3Q9Y2W1 955 aaKnown RBP12.76□□□□□ -0.37
ITM2A-201ENST00000373298 ATMINO43313 823 aaPredicted RBP12.75□□□□□ -0.37
ITM2A-201ENST00000373298 U2AF1L5P0DN76 240 aaPredicted RBP12.75□□□□□ -0.37
ITM2A-201ENST00000373298 U2AF1Q01081 240 aaKnown RBP eCLIP12.75□□□□□ -0.37
ITM2A-201ENST00000373298 SENP3-EIF4A1A0A087X0R7 540 aa12.74□□□□□ -0.37
ITM2A-201ENST00000373298 PHACTR3Q96KR7 559 aa12.74□□□□□ -0.37
ITM2A-201ENST00000373298 OVOS2A0A0G2JMS6 1433 aa12.73□□□□□ -0.37
ITM2A-201ENST00000373298 POTEMA6NI47 508 aa12.73□□□□□ -0.37
ITM2A-201ENST00000373298 MARCH10Q8NA82 808 aaPredicted RBP12.73□□□□□ -0.37
ITM2A-201ENST00000373298 RSPH6AQ9H0K4 717 aa12.73□□□□□ -0.37
ITM2A-201ENST00000373298 MRS2Q9HD23 443 aa12.73□□□□□ -0.37
ITM2A-201ENST00000373298 ADAMTS8Q9UP79 889 aa12.73□□□□□ -0.37
ITM2A-201ENST00000373298 METRNQ9UJH8 293 aa12.73□□□□□ -0.37
ITM2A-201ENST00000373298 PKD1L3Q7Z443 1732 aa12.72□□□□□ -0.37
ITM2A-201ENST00000373298 POTEJP0CG39 1038 aa12.72□□□□□ -0.37
ITM2A-201ENST00000373298 C7P10643 843 aa12.72□□□□□ -0.37
ITM2A-201ENST00000373298 PRKAR2BP31323 418 aa12.72□□□□□ -0.37
ITM2A-201ENST00000373298 DDB1Q16531 1140 aa12.72□□□□□ -0.37
ITM2A-201ENST00000373298 PNISRQ8TF01 805 aaKnown RBP12.72□□□□□ -0.37
ITM2A-201ENST00000373298 RAPGEF4Q8WZA2 1011 aa12.72□□□□□ -0.37
ITM2A-201ENST00000373298 SLC39A7Q92504 469 aa12.72□□□□□ -0.37
ITM2A-201ENST00000373298 KAT6BQ8WYB5 2073 aa12.72□□□□□ -0.37
ITM2A-201ENST00000373298 TNS2Q63HR2 1409 aa12.71□□□□□ -0.37
ITM2A-201ENST00000373298 CYP27B1O15528 508 aa12.71□□□□□ -0.37
ITM2A-201ENST00000373298 TATP17735 454 aaPredicted RBP12.71□□□□□ -0.37
ITM2A-201ENST00000373298 PTF1AQ7RTS3 328 aa12.71□□□□□ -0.37
ITM2A-201ENST00000373298 CCDC146Q8IYE0 955 aa12.71□□□□□ -0.37
ITM2A-201ENST00000373298 DDX54Q8TDD1 881 aaKnown RBP12.71□□□□□ -0.37
ITM2A-201ENST00000373298 EXOC5O00471 708 aa12.7□□□□□ -0.38
ITM2A-201ENST00000373298 PROM2Q8N271 834 aa12.7□□□□□ -0.38
ITM2A-201ENST00000373298 ZCRB1Q8TBF4 217 aaKnown RBP12.7□□□□□ -0.38
ITM2A-201ENST00000373298 PLEKHF1Q96S99 279 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms