RNA–Protein interactions for RNA: ENST00000373163.5

TRAPPC3-203, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 951 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-203ENST00000373163 MON2Q7Z3U7 1717 aa22.49■■□□□ 1.19
TRAPPC3-203ENST00000373163 LTN1O94822 1766 aa22.49■■□□□ 1.19
TRAPPC3-203ENST00000373163 LTV1Q96GA3 475 aaPredicted RBP22.48■■□□□ 1.19
TRAPPC3-203ENST00000373163 LY75O60449 1722 aa22.48■■□□□ 1.19
TRAPPC3-203ENST00000373163 IP6K1Q92551 441 aa22.47■■□□□ 1.19
TRAPPC3-203ENST00000373163 USP47Q96K76 1375 aa22.47■■□□□ 1.19
TRAPPC3-203ENST00000373163 ROCK2O75116 1388 aaKnown RBP22.46■■□□□ 1.19
TRAPPC3-203ENST00000373163 DOT1LQ8TEK3 1739 aa22.45■■□□□ 1.19
TRAPPC3-203ENST00000373163 L3MBTL2Q969R5 705 aa22.45■■□□□ 1.18
TRAPPC3-203ENST00000373163 CD163L1Q9NR16 1453 aa22.45■■□□□ 1.18
TRAPPC3-203ENST00000373163 KAT6BQ8WYB5 2073 aa22.45■■□□□ 1.18
TRAPPC3-203ENST00000373163 ZCRB1Q8TBF4 217 aaKnown RBP22.44■■□□□ 1.18
TRAPPC3-203ENST00000373163 KIF3CO14782 793 aa22.43■■□□□ 1.18
TRAPPC3-203ENST00000373163 HDGFL2Q7Z4V5 671 aaPredicted RBP22.43■■□□□ 1.18
TRAPPC3-203ENST00000373163 FLAD1Q8NFF5 587 aa22.42■■□□□ 1.18
TRAPPC3-203ENST00000373163 TMC1Q8TDI8 760 aa22.42■■□□□ 1.18
TRAPPC3-203ENST00000373163 EDC4Q6P2E9 1401 aaKnown RBP22.41■■□□□ 1.18
TRAPPC3-203ENST00000373163 APLP1P51693 650 aa22.41■■□□□ 1.18
TRAPPC3-203ENST00000373163 FAM208AQ9UK61 1670 aaKnown RBP22.4■■□□□ 1.18
TRAPPC3-203ENST00000373163 IGSF1Q8N6C5 1336 aa22.4■■□□□ 1.18
TRAPPC3-203ENST00000373163 WWC3Q9ULE0 1092 aa22.4■■□□□ 1.18
TRAPPC3-203ENST00000373163 MEGF6O75095 1541 aa22.39■■□□□ 1.17
TRAPPC3-203ENST00000373163 HMGB2P26583 209 aaKnown RBP22.38■■□□□ 1.17
TRAPPC3-203ENST00000373163 SLC12A5Q9H2X9 1139 aa22.37■■□□□ 1.17
TRAPPC3-203ENST00000373163 HOXC9P31274 260 aa22.36■■□□□ 1.17
TRAPPC3-203ENST00000373163 MAP3K19Q56UN5 1328 aa22.35■■□□□ 1.17
TRAPPC3-203ENST00000373163 TERF2IPQ9NYB0 399 aa22.35■■□□□ 1.17
TRAPPC3-203ENST00000373163 A0A1W2PP64 1363 aa22.35■■□□□ 1.17
TRAPPC3-203ENST00000373163 PALLDQ8WX93 1383 aa22.35■■□□□ 1.17
TRAPPC3-203ENST00000373163 C5P01031 1676 aa22.34■■□□□ 1.17
TRAPPC3-203ENST00000373163 AMPHP49418 695 aa22.34■■□□□ 1.17
TRAPPC3-203ENST00000373163 DNAJC5GQ8N7S2 189 aa22.34■■□□□ 1.17
TRAPPC3-203ENST00000373163 AK7Q96M32 723 aa22.33■■□□□ 1.17
TRAPPC3-203ENST00000373163 CGNL1Q0VF96 1302 aa22.31■■□□□ 1.16
TRAPPC3-203ENST00000373163 TOMM70O94826 608 aa22.31■■□□□ 1.16
TRAPPC3-203ENST00000373163 AMIGO3Q86WK7 504 aa22.31■■□□□ 1.16
TRAPPC3-203ENST00000373163 PHF14O94880 888 aa22.3■■□□□ 1.16
TRAPPC3-203ENST00000373163 COG3Q96JB2 828 aa22.3■■□□□ 1.16
TRAPPC3-203ENST00000373163 FBLN1P23142 703 aa22.29■■□□□ 1.16
TRAPPC3-203ENST00000373163 RAPGEF4Q8WZA2 1011 aa22.29■■□□□ 1.16
TRAPPC3-203ENST00000373163 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.28■■□□□ 1.16
TRAPPC3-203ENST00000373163 NBPF6Q5VWK0 638 aa22.28■■□□□ 1.16
TRAPPC3-203ENST00000373163 MPRIPQ6WCQ1 1025 aa22.28■■□□□ 1.16
TRAPPC3-203ENST00000373163 USHBP1Q8N6Y0 703 aa22.28■■□□□ 1.16
TRAPPC3-203ENST00000373163 NBPF4Q96M43 638 aa22.28■■□□□ 1.16
TRAPPC3-203ENST00000373163 CICQ96RK0 1608 aaPredicted RBP22.28■■□□□ 1.16
TRAPPC3-203ENST00000373163 SMIM5Q71RC9 77 aa22.27■■□□□ 1.16
TRAPPC3-203ENST00000373163 NSD3Q9BZ95 1437 aa22.27■■□□□ 1.16
TRAPPC3-203ENST00000373163 PCDH11XQ9BZA7 1347 aa22.27■■□□□ 1.16
TRAPPC3-203ENST00000373163 PCDH11YQ9BZA8 1340 aa22.27■■□□□ 1.16
TRAPPC3-203ENST00000373163 C4BP0C0L5 1744 aa22.26■■□□□ 1.15
TRAPPC3-203ENST00000373163 RTL1A6NKG5 1358 aa22.25■■□□□ 1.15
TRAPPC3-203ENST00000373163 TATP17735 454 aaPredicted RBP22.25■■□□□ 1.15
TRAPPC3-203ENST00000373163 SMARCC1Q92922 1105 aaPredicted RBP22.25■■□□□ 1.15
TRAPPC3-203ENST00000373163 SIN3AQ96ST3 1273 aa22.25■■□□□ 1.15
TRAPPC3-203ENST00000373163 SSFA2P28290 1259 aa22.24■■□□□ 1.15
TRAPPC3-203ENST00000373163 TOGARAM1Q9Y4F4 1720 aa22.23■■□□□ 1.15
TRAPPC3-203ENST00000373163 COL13A1Q5TAT6 717 aaPredicted RBP22.23■■□□□ 1.15
TRAPPC3-203ENST00000373163 SMG6Q86US8 1419 aaKnown RBP22.23■■□□□ 1.15
TRAPPC3-203ENST00000373163 RGPD2P0DJD1 1756 aa22.22■■□□□ 1.15
TRAPPC3-203ENST00000373163 PUS7Q96PZ0 661 aaKnown RBP22.22■■□□□ 1.15
TRAPPC3-203ENST00000373163 CARD11Q9BXL7 1154 aa22.22■■□□□ 1.15
TRAPPC3-203ENST00000373163 NMRK2Q9NPI5 230 aa22.22■■□□□ 1.15
TRAPPC3-203ENST00000373163 TAF1LQ8IZX4 1826 aa22.22■■□□□ 1.15
TRAPPC3-203ENST00000373163 RRS1Q15050 365 aaKnown RBP22.21■■□□□ 1.15
TRAPPC3-203ENST00000373163 CAPN15O75808 1086 aa22.2■■□□□ 1.14
TRAPPC3-203ENST00000373163 NEUROD1Q13562 356 aa22.2■■□□□ 1.14
TRAPPC3-203ENST00000373163 KLRG1Q96E93 195 aa22.2■■□□□ 1.14
TRAPPC3-203ENST00000373163 BCS1LQ9Y276 419 aa22.2■■□□□ 1.14
TRAPPC3-203ENST00000373163 PXDNLA1KZ92 1463 aa22.2■■□□□ 1.14
TRAPPC3-203ENST00000373163 CYP27B1O15528 508 aa22.19■■□□□ 1.14
TRAPPC3-203ENST00000373163 LINC00116Q8NCU8 138 aa22.19■■□□□ 1.14
TRAPPC3-203ENST00000373163 MMP10P09238 476 aa22.18■■□□□ 1.14
TRAPPC3-203ENST00000373163 JMYQ8N9B5 988 aa22.18■■□□□ 1.14
TRAPPC3-203ENST00000373163 RBM46Q8TBY0 533 aaKnown RBP22.18■■□□□ 1.14
TRAPPC3-203ENST00000373163 TGFB2P61812 414 aa22.17■■□□□ 1.14
TRAPPC3-203ENST00000373163 HTRA3P83110 453 aa22.17■■□□□ 1.14
TRAPPC3-203ENST00000373163 ARHGAP27Q6ZUM4 889 aa22.17■■□□□ 1.14
TRAPPC3-203ENST00000373163 PIGBQ92521 554 aa22.17■■□□□ 1.14
TRAPPC3-203ENST00000373163 UBR3Q6ZT12 1888 aa22.17■■□□□ 1.14
TRAPPC3-203ENST00000373163 LOC102724428A0A0B4J2F2 783 aa22.16■■□□□ 1.14
TRAPPC3-203ENST00000373163 GNPATO15228 680 aa22.16■■□□□ 1.14
TRAPPC3-203ENST00000373163 SIK1P57059 783 aa22.16■■□□□ 1.14
TRAPPC3-203ENST00000373163 C16orf71Q8IYS4 520 aaPredicted RBP22.16■■□□□ 1.14
TRAPPC3-203ENST00000373163 WDR90Q96KV7 1748 aa22.15■■□□□ 1.14
TRAPPC3-203ENST00000373163 A0A0G2JLW4 131 aa22.14■■□□□ 1.13
TRAPPC3-203ENST00000373163 TNS4Q8IZW8 715 aa22.14■■□□□ 1.13
TRAPPC3-203ENST00000373163 FSTL1Q12841 308 aa22.13■■□□□ 1.13
TRAPPC3-203ENST00000373163 HSP90AB2PQ58FF8 381 aa22.13■■□□□ 1.13
TRAPPC3-203ENST00000373163 INSRP06213 1382 aa22.12■■□□□ 1.13
TRAPPC3-203ENST00000373163 FCHSD2O94868 740 aa22.11■■□□□ 1.13
TRAPPC3-203ENST00000373163 PRELPP51888 382 aa22.11■■□□□ 1.13
TRAPPC3-203ENST00000373163 ITPK1Q13572 414 aa22.11■■□□□ 1.13
TRAPPC3-203ENST00000373163 C10orf71Q711Q0 1435 aa22.11■■□□□ 1.13
TRAPPC3-203ENST00000373163 ATP6V1AP38606 617 aa22.1■■□□□ 1.13
TRAPPC3-203ENST00000373163 NKX1-1Q15270 411 aaPredicted RBP22.1■■□□□ 1.13
TRAPPC3-203ENST00000373163 C9orf131Q5VYM1 1079 aa22.1■■□□□ 1.13
TRAPPC3-203ENST00000373163 GGNBP2Q9H3C7 697 aa22.1■■□□□ 1.13
TRAPPC3-203ENST00000373163 PLEKHG2Q9H7P9 1386 aa22.1■■□□□ 1.13
TRAPPC3-203ENST00000373163 FYB1O15117 783 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms