RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 CADPS2Q86UW7 1296 aa17.02■□□□□ 0.32
CSTF2-201ENST00000372972 ZBTB40Q9NUA8 1239 aa17.02■□□□□ 0.32
CSTF2-201ENST00000372972 ZNF335Q9H4Z2 1342 aaPredicted RBP17.02■□□□□ 0.32
CSTF2-201ENST00000372972 MSH6P52701 1360 aa17.02■□□□□ 0.31
CSTF2-201ENST00000372972 HOXC9P31274 260 aa17.02■□□□□ 0.31
CSTF2-201ENST00000372972 HDAC1Q13547 482 aaPredicted RBP17.02■□□□□ 0.31
CSTF2-201ENST00000372972 TRPM3Q9HCF6 1732 aaPredicted RBP17.02■□□□□ 0.31
CSTF2-201ENST00000372972 KDRP35968 1356 aa17.01■□□□□ 0.31
CSTF2-201ENST00000372972 CHL1O00533 1208 aa17.01■□□□□ 0.31
CSTF2-201ENST00000372972 EYA1Q99502 592 aa17.01■□□□□ 0.31
CSTF2-201ENST00000372972 PDZRN3Q9UPQ7 1066 aa17.01■□□□□ 0.31
CSTF2-201ENST00000372972 IGSF1Q8N6C5 1336 aa17.01■□□□□ 0.31
CSTF2-201ENST00000372972 NFAT5O94916 1531 aa17■□□□□ 0.31
CSTF2-201ENST00000372972 HAP1P54257 671 aaPredicted RBP17■□□□□ 0.31
CSTF2-201ENST00000372972 MCM10Q7L590 875 aa17■□□□□ 0.31
CSTF2-201ENST00000372972 CHMP4BQ9H444 224 aaKnown RBP17■□□□□ 0.31
CSTF2-201ENST00000372972 LMOD2Q6P5Q4 547 aa16.99■□□□□ 0.31
CSTF2-201ENST00000372972 LTN1O94822 1766 aa16.99■□□□□ 0.31
CSTF2-201ENST00000372972 MTHFSDQ2M296 383 aaKnown RBP16.98■□□□□ 0.31
CSTF2-201ENST00000372972 KCNH5Q8NCM2 988 aa16.98■□□□□ 0.31
CSTF2-201ENST00000372972 GAS2L2Q8NHY3 880 aa16.97■□□□□ 0.31
CSTF2-201ENST00000372972 RTF1Q92541 710 aaKnown RBP16.97■□□□□ 0.31
CSTF2-201ENST00000372972 DDX17Q92841 729 aaKnown RBP16.97■□□□□ 0.31
CSTF2-201ENST00000372972 DDRGK1Q96HY6 314 aa16.97■□□□□ 0.31
CSTF2-201ENST00000372972 RTL1A6NKG5 1358 aa16.97■□□□□ 0.31
CSTF2-201ENST00000372972 KIAA0232Q92628 1395 aa16.96■□□□□ 0.31
CSTF2-201ENST00000372972 ZBTB7BO15156 539 aaPredicted RBP16.96■□□□□ 0.31
CSTF2-201ENST00000372972 PLEKHG5O94827 1062 aa16.96■□□□□ 0.31
CSTF2-201ENST00000372972 IP6K1Q92551 441 aa16.96■□□□□ 0.31
CSTF2-201ENST00000372972 API5Q9BZZ5 524 aaKnown RBP16.96■□□□□ 0.31
CSTF2-201ENST00000372972 CRB1P82279 1406 aa16.96■□□□□ 0.31
CSTF2-201ENST00000372972 SLIT3O75094 1523 aa16.96■□□□□ 0.31
CSTF2-201ENST00000372972 USP19O94966 1318 aa16.95■□□□□ 0.3
CSTF2-201ENST00000372972 GCP02774 474 aa16.95■□□□□ 0.3
CSTF2-201ENST00000372972 LTV1Q96GA3 475 aaPredicted RBP16.95■□□□□ 0.3
CSTF2-201ENST00000372972 ABCC4O15439 1325 aa16.95■□□□□ 0.3
CSTF2-201ENST00000372972 HTATSF1O43719 755 aaKnown RBP16.95■□□□□ 0.3
CSTF2-201ENST00000372972 ALS2Q96Q42 1657 aa16.94■□□□□ 0.3
CSTF2-201ENST00000372972 ZBTB7CA1YPR0 619 aa16.94■□□□□ 0.3
CSTF2-201ENST00000372972 SMC5Q8IY18 1101 aa16.94■□□□□ 0.3
CSTF2-201ENST00000372972 NPHP3Q7Z494 1330 aa16.93■□□□□ 0.3
CSTF2-201ENST00000372972 ARHGEF25Q86VW2 580 aa16.92■□□□□ 0.3
CSTF2-201ENST00000372972 PHRF1Q9P1Y6 1649 aaKnown RBP16.92■□□□□ 0.3
CSTF2-201ENST00000372972 KRT24Q2M2I5 525 aa16.91■□□□□ 0.3
CSTF2-201ENST00000372972 BRINP3Q76B58 766 aa16.91■□□□□ 0.3
CSTF2-201ENST00000372972 GNAT3A8MTJ3 354 aa16.9■□□□□ 0.3
CSTF2-201ENST00000372972 TSPYL4Q9UJ04 414 aa16.9■□□□□ 0.3
CSTF2-201ENST00000372972 PXDNQ92626 1479 aa16.9■□□□□ 0.3
CSTF2-201ENST00000372972 MED1Q15648 1581 aaPredicted RBP16.9■□□□□ 0.3
CSTF2-201ENST00000372972 MIS18AQ9NYP9 233 aa16.89■□□□□ 0.3
CSTF2-201ENST00000372972 SLAIN2Q9P270 581 aa16.89■□□□□ 0.3
CSTF2-201ENST00000372972 USHBP1Q8N6Y0 703 aa16.88■□□□□ 0.29
CSTF2-201ENST00000372972 PTPRCP08575 1304 aa16.88■□□□□ 0.29
CSTF2-201ENST00000372972 TNS3Q68CZ2 1445 aa16.88■□□□□ 0.29
CSTF2-201ENST00000372972 NUCB1Q02818 461 aa16.88■□□□□ 0.29
CSTF2-201ENST00000372972 INTS3Q68E01 1043 aaKnown RBP16.88■□□□□ 0.29
CSTF2-201ENST00000372972 NBPF6Q5VWK0 638 aa16.87■□□□□ 0.29
CSTF2-201ENST00000372972 NBPF4Q96M43 638 aa16.87■□□□□ 0.29
CSTF2-201ENST00000372972 VIRMAQ69YN4 1812 aaKnown RBP16.87■□□□□ 0.29
CSTF2-201ENST00000372972 SPATA31A3Q5VYP0 1347 aa16.87■□□□□ 0.29
CSTF2-201ENST00000372972 GCC1Q96CN9 775 aa16.86■□□□□ 0.29
CSTF2-201ENST00000372972 SEC24BO95487 1268 aa16.86■□□□□ 0.29
CSTF2-201ENST00000372972 ZC3H6P61129 1189 aaKnown RBP16.86■□□□□ 0.29
CSTF2-201ENST00000372972 MAP3K5Q99683 1374 aa16.85■□□□□ 0.29
CSTF2-201ENST00000372972 SLC4A2P04920 1241 aa16.85■□□□□ 0.29
CSTF2-201ENST00000372972 C1orf115Q9H7X2 142 aa16.85■□□□□ 0.29
CSTF2-201ENST00000372972 BABAM1Q9NWV8 329 aa16.85■□□□□ 0.29
CSTF2-201ENST00000372972 RGPD2P0DJD1 1756 aa16.85■□□□□ 0.29
CSTF2-201ENST00000372972 IL17REQ8NFR9 667 aa16.84■□□□□ 0.29
CSTF2-201ENST00000372972 CABLES1Q8TDN4 633 aa16.84■□□□□ 0.29
CSTF2-201ENST00000372972 LRRC59Q96AG4 307 aaKnown RBP16.84■□□□□ 0.29
CSTF2-201ENST00000372972 DAXXQ9UER7 740 aaPredicted RBP16.84■□□□□ 0.29
CSTF2-201ENST00000372972 AXIN2Q9Y2T1 843 aa16.84■□□□□ 0.29
CSTF2-201ENST00000372972 CHD1LQ86WJ1 897 aa16.84■□□□□ 0.29
CSTF2-201ENST00000372972 TAF7Q15545 349 aaPredicted RBP16.83■□□□□ 0.28
CSTF2-201ENST00000372972 SIRT2Q8IXJ6 389 aa16.83■□□□□ 0.28
CSTF2-201ENST00000372972 ANKRD24Q8TF21 1146 aa16.83■□□□□ 0.28
CSTF2-201ENST00000372972 UPF2Q9HAU5 1272 aaKnown RBP16.83■□□□□ 0.28
CSTF2-201ENST00000372972 RGS12O14924 1447 aa16.83■□□□□ 0.28
CSTF2-201ENST00000372972 RGPD5Q99666 1765 aa16.82■□□□□ 0.28
CSTF2-201ENST00000372972 LRRC37A3O60309 1634 aa16.81■□□□□ 0.28
CSTF2-201ENST00000372972 LNPKQ9C0E8 428 aa16.81■□□□□ 0.28
CSTF2-201ENST00000372972 SOS1Q07889 1333 aaPredicted RBP16.81■□□□□ 0.28
CSTF2-201ENST00000372972 SOS2Q07890 1332 aaPredicted RBP16.81■□□□□ 0.28
CSTF2-201ENST00000372972 CRYBG1Q9Y4K1 1723 aa16.81■□□□□ 0.28
CSTF2-201ENST00000372972 ANKRD45Q5TZF3 282 aa16.8■□□□□ 0.28
CSTF2-201ENST00000372972 STK31Q9BXU1 1019 aa16.8■□□□□ 0.28
CSTF2-201ENST00000372972 CCDC30Q5VVM6 783 aa16.79■□□□□ 0.28
CSTF2-201ENST00000372972 NCAPD2Q15021 1401 aa16.79■□□□□ 0.28
CSTF2-201ENST00000372972 NBR1Q14596 966 aa16.78■□□□□ 0.28
CSTF2-201ENST00000372972 COL18A1P39060 1754 aa16.78■□□□□ 0.28
CSTF2-201ENST00000372972 G2E3Q7L622 706 aa16.78■□□□□ 0.28
CSTF2-201ENST00000372972 RPAP2Q8IXW5 612 aaPredicted RBP16.78■□□□□ 0.28
CSTF2-201ENST00000372972 CEMIPQ8WUJ3 1361 aa16.77■□□□□ 0.28
CSTF2-201ENST00000372972 ERBB3P21860 1342 aa16.77■□□□□ 0.28
CSTF2-201ENST00000372972 SLC4A3P48751 1232 aa16.77■□□□□ 0.28
CSTF2-201ENST00000372972 ANKRD44Q8N8A2 993 aa16.77■□□□□ 0.28
CSTF2-201ENST00000372972 CAMTA1Q9Y6Y1 1673 aa16.77■□□□□ 0.28
CSTF2-201ENST00000372972 CCT4P50991 539 aaKnown RBP16.77■□□□□ 0.27
CSTF2-201ENST00000372972 CHRNA2Q15822 529 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms