RNA–Protein interactions for RNA: ENST00000372922.8

TRERF1-204, Transcript of transcriptional regulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRERF1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-204ENST00000372922 TSPYL1Q9H0U9 437 aa11.67□□□□□ -0.54
TRERF1-204ENST00000372922 EFCAB5A4FU69 1503 aa11.67□□□□□ -0.54
TRERF1-204ENST00000372922 SLC26A8Q96RN1 970 aa11.67□□□□□ -0.54
TRERF1-204ENST00000372922 TANGO6Q9C0B7 1094 aa11.67□□□□□ -0.54
TRERF1-204ENST00000372922 ZNF287Q9HBT7 754 aa11.67□□□□□ -0.54
TRERF1-204ENST00000372922 BCCIPQ9P287 314 aaKnown RBP eCLIP11.67□□□□□ -0.54
TRERF1-204ENST00000372922 SERPINC1P01008 464 aa11.67□□□□□ -0.54
TRERF1-204ENST00000372922 STK3Q13188 491 aa11.67□□□□□ -0.54
TRERF1-204ENST00000372922 IPO4Q8TEX9 1081 aaKnown RBP11.67□□□□□ -0.54
TRERF1-204ENST00000372922 ANKRD18AQ8IVF6 992 aa11.66□□□□□ -0.54
TRERF1-204ENST00000372922 CAVIN1Q6NZI2 390 aaKnown RBP11.66□□□□□ -0.54
TRERF1-204ENST00000372922 GIMAP7Q8NHV1 300 aa11.66□□□□□ -0.54
TRERF1-204ENST00000372922 FIBPO43427 364 aa11.66□□□□□ -0.54
TRERF1-204ENST00000372922 TRIM21P19474 475 aaKnown RBP11.66□□□□□ -0.54
TRERF1-204ENST00000372922 WASF1Q92558 559 aa11.66□□□□□ -0.54
TRERF1-204ENST00000372922 LEKR1Q6ZMV7 388 aa11.66□□□□□ -0.54
TRERF1-204ENST00000372922 BICDL1Q6ZP65 573 aa11.66□□□□□ -0.54
TRERF1-204ENST00000372922 RNF214Q8ND24 703 aa11.66□□□□□ -0.54
TRERF1-204ENST00000372922 ZMYND15Q9H091 742 aa11.66□□□□□ -0.54
TRERF1-204ENST00000372922 ME1P48163 572 aa11.66□□□□□ -0.54
TRERF1-204ENST00000372922 PRPF40AO75400 957 aaKnown RBP11.65□□□□□ -0.54
TRERF1-204ENST00000372922 GNAT3A8MTJ3 354 aa11.65□□□□□ -0.54
TRERF1-204ENST00000372922 MATR3P43243 847 aaKnown RBP eCLIP11.65□□□□□ -0.54
TRERF1-204ENST00000372922 KRT32Q14532 448 aa11.65□□□□□ -0.54
TRERF1-204ENST00000372922 ZPR1O75312 459 aa11.65□□□□□ -0.54
TRERF1-204ENST00000372922 WDHD1O75717 1129 aaPredicted RBP11.65□□□□□ -0.54
TRERF1-204ENST00000372922 ANKRD30BQ9BXX2 1392 aa11.65□□□□□ -0.54
TRERF1-204ENST00000372922 SRGAP3O43295 1099 aa11.65□□□□□ -0.54
TRERF1-204ENST00000372922 CFTRP13569 1480 aa11.65□□□□□ -0.54
TRERF1-204ENST00000372922 MAP4K4O95819 1239 aaPredicted RBP11.65□□□□□ -0.54
TRERF1-204ENST00000372922 NBPF1Q3BBV0 1214 aa11.65□□□□□ -0.54
TRERF1-204ENST00000372922 WDR33Q9C0J8 1336 aaKnown RBP11.65□□□□□ -0.55
TRERF1-204ENST00000372922 BLOC1S2Q6QNY1 142 aa11.65□□□□□ -0.55
TRERF1-204ENST00000372922 DNAI2Q9GZS0 605 aa11.64□□□□□ -0.55
TRERF1-204ENST00000372922 CDCA7LQ96GN5 454 aa11.64□□□□□ -0.55
TRERF1-204ENST00000372922 CENPHQ9H3R5 247 aa11.64□□□□□ -0.55
TRERF1-204ENST00000372922 ATF7IPQ6VMQ6 1270 aa11.64□□□□□ -0.55
TRERF1-204ENST00000372922 TRAK2O60296 914 aa11.64□□□□□ -0.55
TRERF1-204ENST00000372922 CCDC192P0DO97 292 aa11.64□□□□□ -0.55
TRERF1-204ENST00000372922 KRT85P78386 507 aa11.64□□□□□ -0.55
TRERF1-204ENST00000372922 ZHX1Q9UKY1 873 aaPredicted RBP11.64□□□□□ -0.55
TRERF1-204ENST00000372922 AKAP2Q9Y2D5 859 aa11.64□□□□□ -0.55
TRERF1-204ENST00000372922 CBFA2T2O43439 604 aa11.64□□□□□ -0.55
TRERF1-204ENST00000372922 SEPT7Q16181 437 aaKnown RBP11.64□□□□□ -0.55
TRERF1-204ENST00000372922 FCHSD2O94868 740 aa11.64□□□□□ -0.55
TRERF1-204ENST00000372922 TNMDQ9H2S6 317 aa11.64□□□□□ -0.55
TRERF1-204ENST00000372922 TNIP1Q15025 636 aa11.63□□□□□ -0.55
TRERF1-204ENST00000372922 ZSCAN31Q96LW9 406 aaPredicted RBP11.63□□□□□ -0.55
TRERF1-204ENST00000372922 TMOD3Q9NYL9 352 aa11.63□□□□□ -0.55
TRERF1-204ENST00000372922 RRS1Q15050 365 aaKnown RBP11.63□□□□□ -0.55
TRERF1-204ENST00000372922 LARP1BQ659C4 914 aaKnown RBP11.63□□□□□ -0.55
TRERF1-204ENST00000372922 MTERF4Q7Z6M4 381 aaKnown RBP11.63□□□□□ -0.55
TRERF1-204ENST00000372922 CAVIN4Q5BKX8 364 aa11.63□□□□□ -0.55
TRERF1-204ENST00000372922 AIDAQ96BJ3 306 aa11.63□□□□□ -0.55
TRERF1-204ENST00000372922 SSBP05455 408 aaKnown RBP eCLIP11.63□□□□□ -0.55
TRERF1-204ENST00000372922 ZC3H6P61129 1189 aaKnown RBP11.63□□□□□ -0.55
TRERF1-204ENST00000372922 CCDC181Q5TID7 509 aa11.63□□□□□ -0.55
TRERF1-204ENST00000372922 ZNF428Q96B54 188 aa11.63□□□□□ -0.55
TRERF1-204ENST00000372922 TRERF1Q96PN7 1200 aa11.63□□□□□ -0.55
TRERF1-204ENST00000372922 NFKBIBQ15653 356 aa11.62□□□□□ -0.55
TRERF1-204ENST00000372922 IMMTQ16891 758 aaKnown RBP11.62□□□□□ -0.55
TRERF1-204ENST00000372922 PDRG1Q9NUG6 133 aa11.62□□□□□ -0.55
TRERF1-204ENST00000372922 CFAP45Q9UL16 551 aa11.62□□□□□ -0.55
TRERF1-204ENST00000372922 TROQ12816 1431 aaPredicted RBP11.62□□□□□ -0.55
TRERF1-204ENST00000372922 GOLGA6L10A6NI86 522 aa11.62□□□□□ -0.55
TRERF1-204ENST00000372922 RAPGEF3O95398 923 aa11.62□□□□□ -0.55
TRERF1-204ENST00000372922 XPCQ01831 940 aaPredicted RBP11.62□□□□□ -0.55
TRERF1-204ENST00000372922 SUPT6HQ7KZ85 1726 aaKnown RBP11.62□□□□□ -0.55
TRERF1-204ENST00000372922 IRX3P78415 501 aaPredicted RBP11.62□□□□□ -0.55
TRERF1-204ENST00000372922 METTL24Q5JXM2 366 aa11.62□□□□□ -0.55
TRERF1-204ENST00000372922 CEP131Q9UPN4 1083 aa11.62□□□□□ -0.55
TRERF1-204ENST00000372922 NUDT16Q96DE0 195 aaKnown RBP11.62□□□□□ -0.55
TRERF1-204ENST00000372922 CLGNO14967 610 aa11.62□□□□□ -0.55
TRERF1-204ENST00000372922 IDH1O75874 414 aaKnown RBP11.62□□□□□ -0.55
TRERF1-204ENST00000372922 USP5P45974 858 aa11.62□□□□□ -0.55
TRERF1-204ENST00000372922 MVPQ14764 893 aaKnown RBP11.62□□□□□ -0.55
TRERF1-204ENST00000372922 CEP57L1Q8IYX8 460 aa11.62□□□□□ -0.55
TRERF1-204ENST00000372922 NEBLO76041 1014 aa11.61□□□□□ -0.55
TRERF1-204ENST00000372922 CHD1LQ86WJ1 897 aa11.61□□□□□ -0.55
TRERF1-204ENST00000372922 SEC63Q9UGP8 760 aaKnown RBP11.61□□□□□ -0.55
TRERF1-204ENST00000372922 BCAR3O75815 825 aa11.61□□□□□ -0.55
TRERF1-204ENST00000372922 NFE2L2Q16236 605 aa11.61□□□□□ -0.55
TRERF1-204ENST00000372922 CCDC61Q9Y6R9 512 aa11.61□□□□□ -0.55
TRERF1-204ENST00000372922 CRACR2BQ8N4Y2 399 aaPredicted RBP11.6□□□□□ -0.55
TRERF1-204ENST00000372922 POLR3DP05423 398 aaPredicted RBP11.6□□□□□ -0.55
TRERF1-204ENST00000372922 IFIT1P09914 478 aaKnown RBP11.6□□□□□ -0.55
TRERF1-204ENST00000372922 SEPT11Q9NVA2 429 aaKnown RBP11.6□□□□□ -0.55
TRERF1-204ENST00000372922 ABCF2Q9UG63 623 aa11.6□□□□□ -0.55
TRERF1-204ENST00000372922 EPRSP07814 1512 aaKnown RBP11.6□□□□□ -0.55
TRERF1-204ENST00000372922 PPM1FP49593 454 aaPredicted RBP11.6□□□□□ -0.55
TRERF1-204ENST00000372922 CWC27Q6UX04 472 aaKnown RBP11.6□□□□□ -0.55
TRERF1-204ENST00000372922 K7ELQ4 463 aaPredicted RBP11.6□□□□□ -0.55
TRERF1-204ENST00000372922 POTEJP0CG39 1038 aa11.6□□□□□ -0.55
TRERF1-204ENST00000372922 JAKMIP1Q96N16 626 aaKnown RBP11.6□□□□□ -0.55
TRERF1-204ENST00000372922 SNAPC4Q5SXM2 1469 aa11.6□□□□□ -0.55
TRERF1-204ENST00000372922 RPAP2Q8IXW5 612 aaPredicted RBP11.6□□□□□ -0.55
TRERF1-204ENST00000372922 LARP1Q6PKG0 1096 aaKnown RBP11.6□□□□□ -0.55
TRERF1-204ENST00000372922 RRP9O43818 475 aaKnown RBP11.59□□□□□ -0.55
TRERF1-204ENST00000372922 AMOTQ4VCS5 1084 aa11.59□□□□□ -0.55
TRERF1-204ENST00000372922 AXDND1Q5T1B0 1012 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms