RNA–Protein interactions for RNA: ENST00000372633.1

RAB40A-202, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 BASIC

Gene RAB40A, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-202ENST00000372633 GPT2Q8TD30 523 aa16.85■□□□□ 0.29
RAB40A-202ENST00000372633 DLC1Q96QB1 1528 aa16.85■□□□□ 0.29
RAB40A-202ENST00000372633 SDSP20132 328 aa16.85■□□□□ 0.29
RAB40A-202ENST00000372633 PRIM1P49642 420 aaKnown RBP16.85■□□□□ 0.29
RAB40A-202ENST00000372633 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.84■□□□□ 0.29
RAB40A-202ENST00000372633 CEP85Q6P2H3 762 aa16.83■□□□□ 0.28
RAB40A-202ENST00000372633 CASC1Q6TDU7 716 aa16.83■□□□□ 0.28
RAB40A-202ENST00000372633 ZGPATQ8N5A5 531 aaKnown RBP16.83■□□□□ 0.28
RAB40A-202ENST00000372633 MCM5P33992 734 aa16.83■□□□□ 0.28
RAB40A-202ENST00000372633 OTUD7AQ8TE49 926 aaPredicted RBP16.83■□□□□ 0.28
RAB40A-202ENST00000372633 EMILIN1Q9Y6C2 1016 aa16.83■□□□□ 0.28
RAB40A-202ENST00000372633 NEO1Q92859 1461 aa16.82■□□□□ 0.28
RAB40A-202ENST00000372633 PRPF40AO75400 957 aaKnown RBP16.82■□□□□ 0.28
RAB40A-202ENST00000372633 REC8O95072 547 aa16.82■□□□□ 0.28
RAB40A-202ENST00000372633 NCLP19338 710 aaKnown RBP16.82■□□□□ 0.28
RAB40A-202ENST00000372633 EDC4Q6P2E9 1401 aaKnown RBP16.82■□□□□ 0.28
RAB40A-202ENST00000372633 LRSAM1Q6UWE0 723 aa16.82■□□□□ 0.28
RAB40A-202ENST00000372633 RTL1A6NKG5 1358 aa16.81■□□□□ 0.28
RAB40A-202ENST00000372633 ZKSCAN5Q9Y2L8 839 aa16.81■□□□□ 0.28
RAB40A-202ENST00000372633 TMEM63CQ9P1W3 806 aa16.8■□□□□ 0.28
RAB40A-202ENST00000372633 OSBPL3Q9H4L5 887 aa16.8■□□□□ 0.28
RAB40A-202ENST00000372633 HAP1P54257 671 aaPredicted RBP16.79■□□□□ 0.28
RAB40A-202ENST00000372633 FAM83GA6ND36 823 aa16.79■□□□□ 0.28
RAB40A-202ENST00000372633 ERC2O15083 957 aa16.79■□□□□ 0.28
RAB40A-202ENST00000372633 RBM27Q9P2N5 1060 aaKnown RBP16.79■□□□□ 0.28
RAB40A-202ENST00000372633 TUBGCP6Q96RT7 1819 aa16.79■□□□□ 0.28
RAB40A-202ENST00000372633 SETD1AO15047 1707 aaKnown RBP16.79■□□□□ 0.28
RAB40A-202ENST00000372633 RICTORQ6R327 1708 aa16.79■□□□□ 0.28
RAB40A-202ENST00000372633 MAP7D2Q96T17 732 aa16.78■□□□□ 0.28
RAB40A-202ENST00000372633 RIMBP3CA6NJZ7 1639 aa16.78■□□□□ 0.28
RAB40A-202ENST00000372633 RIMBP3BA6NNM3 1639 aa16.78■□□□□ 0.28
RAB40A-202ENST00000372633 RIMBP3Q9UFD9 1639 aa16.78■□□□□ 0.28
RAB40A-202ENST00000372633 PTPRCP08575 1304 aa16.78■□□□□ 0.28
RAB40A-202ENST00000372633 KIAA0232Q92628 1395 aa16.78■□□□□ 0.28
RAB40A-202ENST00000372633 RAPGEF3O95398 923 aa16.77■□□□□ 0.28
RAB40A-202ENST00000372633 NRKQ7Z2Y5 1582 aa16.77■□□□□ 0.28
RAB40A-202ENST00000372633 MSH6P52701 1360 aa16.77■□□□□ 0.28
RAB40A-202ENST00000372633 MON2Q7Z3U7 1717 aa16.77■□□□□ 0.28
RAB40A-202ENST00000372633 MBD3O95983 291 aa16.77■□□□□ 0.27
RAB40A-202ENST00000372633 CSPP1Q1MSJ5 1256 aa16.77■□□□□ 0.27
RAB40A-202ENST00000372633 SENP3Q9H4L4 574 aaPredicted RBP16.77■□□□□ 0.27
RAB40A-202ENST00000372633 SMARCA5O60264 1052 aaPredicted RBP16.76■□□□□ 0.27
RAB40A-202ENST00000372633 R3HCC1Q9Y3T6 440 aaKnown RBP16.76■□□□□ 0.27
RAB40A-202ENST00000372633 NSFL1CQ9UNZ2 370 aaKnown RBP16.76■□□□□ 0.27
RAB40A-202ENST00000372633 CHL1O00533 1208 aa16.76■□□□□ 0.27
RAB40A-202ENST00000372633 NPM1P06748 294 aaKnown RBP eCLIP16.76■□□□□ 0.27
RAB40A-202ENST00000372633 MCM2P49736 904 aa16.76■□□□□ 0.27
RAB40A-202ENST00000372633 CCDC39Q9UFE4 941 aa16.76■□□□□ 0.27
RAB40A-202ENST00000372633 BRD1O95696 1058 aa16.75■□□□□ 0.27
RAB40A-202ENST00000372633 CUL4AQ13619 759 aa16.75■□□□□ 0.27
RAB40A-202ENST00000372633 DCTN1Q14203 1278 aa16.75■□□□□ 0.27
RAB40A-202ENST00000372633 NME9Q86XW9 330 aa16.75■□□□□ 0.27
RAB40A-202ENST00000372633 SYCE3A1L190 88 aa16.75■□□□□ 0.27
RAB40A-202ENST00000372633 XPCQ01831 940 aaPredicted RBP16.75■□□□□ 0.27
RAB40A-202ENST00000372633 TMX3Q96JJ7 454 aa16.74■□□□□ 0.27
RAB40A-202ENST00000372633 MEIS3Q99687 375 aa16.74■□□□□ 0.27
RAB40A-202ENST00000372633 WAPLQ7Z5K2 1190 aa16.74■□□□□ 0.27
RAB40A-202ENST00000372633 IL17RAQ96F46 866 aa16.74■□□□□ 0.27
RAB40A-202ENST00000372633 C3P01024 1663 aa16.73■□□□□ 0.27
RAB40A-202ENST00000372633 PDE1AP54750 535 aa16.73■□□□□ 0.27
RAB40A-202ENST00000372633 CPS1P31327 1500 aa16.73■□□□□ 0.27
RAB40A-202ENST00000372633 AKAP12Q02952 1782 aa16.73■□□□□ 0.27
RAB40A-202ENST00000372633 INTS4Q96HW7 963 aaKnown RBP16.72■□□□□ 0.27
RAB40A-202ENST00000372633 CHAMP1Q96JM3 812 aa16.72■□□□□ 0.27
RAB40A-202ENST00000372633 ZRANB1Q9UGI0 708 aa16.72■□□□□ 0.27
RAB40A-202ENST00000372633 SALL3Q9BXA9 1300 aa16.72■□□□□ 0.27
RAB40A-202ENST00000372633 DYNC1I1O14576 645 aa16.72■□□□□ 0.27
RAB40A-202ENST00000372633 HMMRO75330 724 aa16.72■□□□□ 0.27
RAB40A-202ENST00000372633 NEK4P51957 841 aa16.72■□□□□ 0.27
RAB40A-202ENST00000372633 KRT24Q2M2I5 525 aa16.72■□□□□ 0.27
RAB40A-202ENST00000372633 COG3Q96JB2 828 aa16.71■□□□□ 0.27
RAB40A-202ENST00000372633 UQCRHLA0A096LP55 91 aa16.71■□□□□ 0.27
RAB40A-202ENST00000372633 UQCRHP07919 91 aa16.71■□□□□ 0.27
RAB40A-202ENST00000372633 ANAPC15P60006 121 aa16.71■□□□□ 0.27
RAB40A-202ENST00000372633 RBM10P98175 930 aaKnown RBP16.71■□□□□ 0.27
RAB40A-202ENST00000372633 WASLO00401 505 aaPredicted RBP16.7■□□□□ 0.26
RAB40A-202ENST00000372633 RRS1Q15050 365 aaKnown RBP16.7■□□□□ 0.26
RAB40A-202ENST00000372633 MTERF4Q7Z6M4 381 aaKnown RBP16.7■□□□□ 0.26
RAB40A-202ENST00000372633 ESYT1Q9BSJ8 1104 aa16.7■□□□□ 0.26
RAB40A-202ENST00000372633 APBB1O00213 710 aa16.69■□□□□ 0.26
RAB40A-202ENST00000372633 SASS6Q6UVJ0 657 aa16.69■□□□□ 0.26
RAB40A-202ENST00000372633 FBXO31Q5XUX0 539 aaPredicted RBP16.68■□□□□ 0.26
RAB40A-202ENST00000372633 TSPY26PQ9H489 355 aa16.68■□□□□ 0.26
RAB40A-202ENST00000372633 FAM13BQ9NYF5 915 aa16.68■□□□□ 0.26
RAB40A-202ENST00000372633 SSH2Q76I76 1423 aa16.68■□□□□ 0.26
RAB40A-202ENST00000372633 RGPD1P0DJD0 1748 aa16.68■□□□□ 0.26
RAB40A-202ENST00000372633 CRB1P82279 1406 aa16.68■□□□□ 0.26
RAB40A-202ENST00000372633 ITSN1Q15811 1721 aa16.67■□□□□ 0.26
RAB40A-202ENST00000372633 SYAP1Q96A49 352 aaPredicted RBP16.67■□□□□ 0.26
RAB40A-202ENST00000372633 A2ML1A8K2U0 1454 aa16.67■□□□□ 0.26
RAB40A-202ENST00000372633 CCT4P50991 539 aaKnown RBP16.66■□□□□ 0.26
RAB40A-202ENST00000372633 AEBP1Q8IUX7 1158 aa16.66■□□□□ 0.26
RAB40A-202ENST00000372633 SLC4A2P04920 1241 aa16.66■□□□□ 0.26
RAB40A-202ENST00000372633 EIF4A2Q14240 407 aaKnown RBP16.66■□□□□ 0.26
RAB40A-202ENST00000372633 MCCP23508 829 aa16.65■□□□□ 0.26
RAB40A-202ENST00000372633 SULT6B1Q6IMI4 303 aa16.65■□□□□ 0.26
RAB40A-202ENST00000372633 PALD1Q9ULE6 856 aa16.65■□□□□ 0.26
RAB40A-202ENST00000372633 NRXN3Q9Y4C0 1643 aa16.65■□□□□ 0.26
RAB40A-202ENST00000372633 EPB41L2O43491 1005 aaKnown RBP16.65■□□□□ 0.26
RAB40A-202ENST00000372633 RNF214Q8ND24 703 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms