RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 MTMR7Q9Y216 660 aa15.87■□□□□ 0.13
RAPGEF1-201ENST00000372189 KIAA0556O60303 1618 aa15.87■□□□□ 0.13
RAPGEF1-201ENST00000372189 NUP153P49790 1475 aaKnown RBP15.87■□□□□ 0.13
RAPGEF1-201ENST00000372189 SYCP2Q9BX26 1530 aa15.86■□□□□ 0.13
RAPGEF1-201ENST00000372189 SCAF11Q99590 1463 aaKnown RBP15.86■□□□□ 0.13
RAPGEF1-201ENST00000372189 LETM1O95202 739 aaPredicted RBP15.86■□□□□ 0.13
RAPGEF1-201ENST00000372189 MNS1Q8NEH6 495 aa15.86■□□□□ 0.13
RAPGEF1-201ENST00000372189 GCC1Q96CN9 775 aa15.86■□□□□ 0.13
RAPGEF1-201ENST00000372189 ZPR1O75312 459 aa15.86■□□□□ 0.13
RAPGEF1-201ENST00000372189 CCDC173Q0VFZ6 552 aa15.86■□□□□ 0.13
RAPGEF1-201ENST00000372189 ACBD3Q9H3P7 528 aa15.86■□□□□ 0.13
RAPGEF1-201ENST00000372189 BRMS1Q9HCU9 246 aa15.86■□□□□ 0.13
RAPGEF1-201ENST00000372189 H0YHG0 523 aa15.85■□□□□ 0.13
RAPGEF1-201ENST00000372189 TOM1O60784 492 aa15.85■□□□□ 0.13
RAPGEF1-201ENST00000372189 TMPOP42166 694 aaKnown RBP15.85■□□□□ 0.13
RAPGEF1-201ENST00000372189 PDE3AQ14432 1141 aa15.85■□□□□ 0.13
RAPGEF1-201ENST00000372189 PAF1Q8N7H5 531 aa15.85■□□□□ 0.13
RAPGEF1-201ENST00000372189 EXOC5O00471 708 aa15.85■□□□□ 0.13
RAPGEF1-201ENST00000372189 TMCO5BA8MYB1 307 aa15.85■□□□□ 0.13
RAPGEF1-201ENST00000372189 PTCD1O75127 700 aaKnown RBP15.85■□□□□ 0.13
RAPGEF1-201ENST00000372189 UGGT2Q9NYU1 1516 aa15.85■□□□□ 0.13
RAPGEF1-201ENST00000372189 XBP1P17861 261 aa15.84■□□□□ 0.13
RAPGEF1-201ENST00000372189 CCDC73Q6ZRK6 1079 aa15.84■□□□□ 0.13
RAPGEF1-201ENST00000372189 USP8P40818 1118 aa15.84■□□□□ 0.13
RAPGEF1-201ENST00000372189 MBD3O95983 291 aa15.84■□□□□ 0.13
RAPGEF1-201ENST00000372189 MCM10Q7L590 875 aa15.84■□□□□ 0.13
RAPGEF1-201ENST00000372189 MPRIPQ6WCQ1 1025 aa15.84■□□□□ 0.13
RAPGEF1-201ENST00000372189 BCCIPQ9P287 314 aaKnown RBP eCLIP15.84■□□□□ 0.13
RAPGEF1-201ENST00000372189 BCAR3O75815 825 aa15.83■□□□□ 0.13
RAPGEF1-201ENST00000372189 FOSBP53539 338 aa15.83■□□□□ 0.13
RAPGEF1-201ENST00000372189 UBAP1LF5GYI3 381 aa15.83■□□□□ 0.12
RAPGEF1-201ENST00000372189 IGHMBP2P38935 993 aaKnown RBP15.83■□□□□ 0.12
RAPGEF1-201ENST00000372189 RBM5P52756 815 aaKnown RBP eCLIP15.83■□□□□ 0.12
RAPGEF1-201ENST00000372189 LRRCC1Q9C099 1032 aa15.83■□□□□ 0.12
RAPGEF1-201ENST00000372189 WDR62O43379 1518 aa15.83■□□□□ 0.12
RAPGEF1-201ENST00000372189 HMGB1P1B2RPK0 211 aaPredicted RBP15.83■□□□□ 0.12
RAPGEF1-201ENST00000372189 RRP9O43818 475 aaKnown RBP15.83■□□□□ 0.12
RAPGEF1-201ENST00000372189 EMILIN1Q9Y6C2 1016 aa15.83■□□□□ 0.12
RAPGEF1-201ENST00000372189 PCMTD1Q96MG8 357 aaPredicted RBP15.82■□□□□ 0.12
RAPGEF1-201ENST00000372189 MIS18AQ9NYP9 233 aa15.82■□□□□ 0.12
RAPGEF1-201ENST00000372189 TAF7Q15545 349 aaPredicted RBP15.82■□□□□ 0.12
RAPGEF1-201ENST00000372189 ATF7IPQ6VMQ6 1270 aa15.82■□□□□ 0.12
RAPGEF1-201ENST00000372189 GIMAP7Q8NHV1 300 aa15.82■□□□□ 0.12
RAPGEF1-201ENST00000372189 CCAR1Q8IX12 1150 aaKnown RBP15.82■□□□□ 0.12
RAPGEF1-201ENST00000372189 NAT10Q9H0A0 1025 aaKnown RBP15.82■□□□□ 0.12
RAPGEF1-201ENST00000372189 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.82■□□□□ 0.12
RAPGEF1-201ENST00000372189 AK7Q96M32 723 aa15.81■□□□□ 0.12
RAPGEF1-201ENST00000372189 ACEP12821 1306 aa15.81■□□□□ 0.12
RAPGEF1-201ENST00000372189 ZSCAN25Q6NSZ9 544 aa15.81■□□□□ 0.12
RAPGEF1-201ENST00000372189 IL27Q8NEV9 243 aa15.81■□□□□ 0.12
RAPGEF1-201ENST00000372189 RIMS2Q9UQ26 1411 aa15.81■□□□□ 0.12
RAPGEF1-201ENST00000372189 TSPY26PQ9H489 355 aa15.81■□□□□ 0.12
RAPGEF1-201ENST00000372189 ABCC10Q5T3U5 1492 aa15.81■□□□□ 0.12
RAPGEF1-201ENST00000372189 DUSP27Q5VZP5 1158 aa15.81■□□□□ 0.12
RAPGEF1-201ENST00000372189 CAVIN1Q6NZI2 390 aaKnown RBP15.81■□□□□ 0.12
RAPGEF1-201ENST00000372189 HMGN5P82970 282 aaKnown RBP15.8■□□□□ 0.12
RAPGEF1-201ENST00000372189 NACAP1Q9BZK3 213 aa15.8■□□□□ 0.12
RAPGEF1-201ENST00000372189 TTC21BQ7Z4L5 1316 aa15.8■□□□□ 0.12
RAPGEF1-201ENST00000372189 CEP126Q9P2H0 1117 aa15.8■□□□□ 0.12
RAPGEF1-201ENST00000372189 HSP90B2PQ58FF3 399 aa15.79■□□□□ 0.12
RAPGEF1-201ENST00000372189 BACH2Q9BYV9 841 aa15.79■□□□□ 0.12
RAPGEF1-201ENST00000372189 SRGAP3O43295 1099 aa15.79■□□□□ 0.12
RAPGEF1-201ENST00000372189 RNF214Q8ND24 703 aa15.79■□□□□ 0.12
RAPGEF1-201ENST00000372189 RUFY1Q96T51 708 aa15.79■□□□□ 0.12
RAPGEF1-201ENST00000372189 TRAPPC8Q9Y2L5 1435 aa15.79■□□□□ 0.12
RAPGEF1-201ENST00000372189 ABCC2Q92887 1545 aa15.79■□□□□ 0.12
RAPGEF1-201ENST00000372189 NSD2O96028 1365 aa15.78■□□□□ 0.12
RAPGEF1-201ENST00000372189 PDZRN3Q9UPQ7 1066 aa15.78■□□□□ 0.12
RAPGEF1-201ENST00000372189 SETSIPP0DME0 302 aa15.78■□□□□ 0.12
RAPGEF1-201ENST00000372189 MCM2P49736 904 aa15.78■□□□□ 0.12
RAPGEF1-201ENST00000372189 AACSQ86V21 672 aa15.78■□□□□ 0.12
RAPGEF1-201ENST00000372189 AXDND1Q5T1B0 1012 aaPredicted RBP15.78■□□□□ 0.12
RAPGEF1-201ENST00000372189 DCTN1Q14203 1278 aa15.77■□□□□ 0.12
RAPGEF1-201ENST00000372189 MVPQ14764 893 aaKnown RBP15.77■□□□□ 0.12
RAPGEF1-201ENST00000372189 RABEP1Q15276 862 aa15.77■□□□□ 0.12
RAPGEF1-201ENST00000372189 CDR1P51861 262 aa15.77■□□□□ 0.12
RAPGEF1-201ENST00000372189 GPATCH11Q8N954 259 aa15.77■□□□□ 0.12
RAPGEF1-201ENST00000372189 NPHP3Q7Z494 1330 aa15.77■□□□□ 0.12
RAPGEF1-201ENST00000372189 ATP2B2Q01814 1243 aa15.77■□□□□ 0.12
RAPGEF1-201ENST00000372189 FKBP4Q02790 459 aaKnown RBP eCLIP15.77■□□□□ 0.12
RAPGEF1-201ENST00000372189 LARP1Q6PKG0 1096 aaKnown RBP15.77■□□□□ 0.12
RAPGEF1-201ENST00000372189 THUMPD2Q9BTF0 503 aaKnown RBP15.77■□□□□ 0.12
RAPGEF1-201ENST00000372189 RPRD2Q5VT52 1461 aaKnown RBP15.77■□□□□ 0.11
RAPGEF1-201ENST00000372189 ANKRD24Q8TF21 1146 aa15.77■□□□□ 0.11
RAPGEF1-201ENST00000372189 CCDC85AQ96PX6 553 aaPredicted RBP15.77■□□□□ 0.11
RAPGEF1-201ENST00000372189 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.76■□□□□ 0.11
RAPGEF1-201ENST00000372189 SUDS3Q9H7L9 328 aaPredicted RBP15.76■□□□□ 0.11
RAPGEF1-201ENST00000372189 INCENPQ9NQS7 918 aa15.76■□□□□ 0.11
RAPGEF1-201ENST00000372189 KDM4AO75164 1064 aa15.76■□□□□ 0.11
RAPGEF1-201ENST00000372189 IFNL2Q8IZJ0 200 aa15.76■□□□□ 0.11
RAPGEF1-201ENST00000372189 OLFM4Q6UX06 510 aa15.75■□□□□ 0.11
RAPGEF1-201ENST00000372189 FMNL2Q96PY5 1086 aa15.75■□□□□ 0.11
RAPGEF1-201ENST00000372189 CHRNA2Q15822 529 aa15.75■□□□□ 0.11
RAPGEF1-201ENST00000372189 PRM3Q9NNZ6 103 aa15.75■□□□□ 0.11
RAPGEF1-201ENST00000372189 PRPF40AO75400 957 aaKnown RBP15.75■□□□□ 0.11
RAPGEF1-201ENST00000372189 MYD88Q99836 296 aa15.75■□□□□ 0.11
RAPGEF1-201ENST00000372189 BCL11BQ9C0K0 894 aaPredicted RBP15.75■□□□□ 0.11
RAPGEF1-201ENST00000372189 RAI14Q9P0K7 980 aa15.75■□□□□ 0.11
RAPGEF1-201ENST00000372189 TNNT1P13805 278 aa15.75■□□□□ 0.11
RAPGEF1-201ENST00000372189 ABCC11Q96J66 1382 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms