RNA–Protein interactions for RNA: ENST00000372056.8

LDB3-203, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-203ENST00000372056 CSB-PGBD3P0DP91 1061 aa16.71■□□□□ 0.27
LDB3-203ENST00000372056 GNAI1P63096 354 aa16.71■□□□□ 0.27
LDB3-203ENST00000372056 AEBP1Q8IUX7 1158 aa16.71■□□□□ 0.27
LDB3-203ENST00000372056 AXIN2Q9Y2T1 843 aa16.71■□□□□ 0.27
LDB3-203ENST00000372056 RAPGEF4Q8WZA2 1011 aa16.69■□□□□ 0.26
LDB3-203ENST00000372056 ZNF428Q96B54 188 aa16.69■□□□□ 0.26
LDB3-203ENST00000372056 IFT57Q9NWB7 429 aa16.69■□□□□ 0.26
LDB3-203ENST00000372056 BABAM1Q9NWV8 329 aa16.69■□□□□ 0.26
LDB3-203ENST00000372056 WDR17Q8IZU2 1322 aa16.69■□□□□ 0.26
LDB3-203ENST00000372056 JCADQ9P266 1359 aa16.69■□□□□ 0.26
LDB3-203ENST00000372056 COL14A1Q05707 1796 aaKnown RBP16.69■□□□□ 0.26
LDB3-203ENST00000372056 LMO7Q8WWI1 1683 aa16.69■□□□□ 0.26
LDB3-203ENST00000372056 EXOSC9Q06265 439 aaKnown RBP16.69■□□□□ 0.26
LDB3-203ENST00000372056 GNAT3A8MTJ3 354 aa16.68■□□□□ 0.26
LDB3-203ENST00000372056 EVA1CP58658 441 aa16.68■□□□□ 0.26
LDB3-203ENST00000372056 NLRP2Q9NX02 1062 aa16.68■□□□□ 0.26
LDB3-203ENST00000372056 PLEKHG5O94827 1062 aa16.67■□□□□ 0.26
LDB3-203ENST00000372056 TATP17735 454 aaPredicted RBP16.67■□□□□ 0.26
LDB3-203ENST00000372056 CANXP27824 592 aaKnown RBP16.67■□□□□ 0.26
LDB3-203ENST00000372056 RBM19Q9Y4C8 960 aaKnown RBP16.67■□□□□ 0.26
LDB3-203ENST00000372056 MTHFSDQ2M296 383 aaKnown RBP16.67■□□□□ 0.26
LDB3-203ENST00000372056 CARD10Q9BWT7 1032 aa16.67■□□□□ 0.26
LDB3-203ENST00000372056 SPG7Q9UQ90 795 aa16.67■□□□□ 0.26
LDB3-203ENST00000372056 SPATA31A6Q5VVP1 1343 aa16.67■□□□□ 0.26
LDB3-203ENST00000372056 RGPD5Q99666 1765 aa16.67■□□□□ 0.26
LDB3-203ENST00000372056 CHRNA2Q15822 529 aa16.66■□□□□ 0.26
LDB3-203ENST00000372056 FRAT1Q92837 279 aaPredicted RBP16.66■□□□□ 0.26
LDB3-203ENST00000372056 CFAP44Q96MT7 982 aa16.66■□□□□ 0.26
LDB3-203ENST00000372056 BCL2L13Q9BXK5 485 aa16.66■□□□□ 0.26
LDB3-203ENST00000372056 AKAP4Q5JQC9 854 aa16.65■□□□□ 0.26
LDB3-203ENST00000372056 THUMPD2Q9BTF0 503 aaKnown RBP16.65■□□□□ 0.26
LDB3-203ENST00000372056 CHMP4AQ9BY43 222 aa16.65■□□□□ 0.26
LDB3-203ENST00000372056 COL5A2P05997 1499 aaPredicted RBP16.65■□□□□ 0.26
LDB3-203ENST00000372056 DLG5Q8TDM6 1919 aa16.65■□□□□ 0.26
LDB3-203ENST00000372056 FAM83GA6ND36 823 aa16.65■□□□□ 0.26
LDB3-203ENST00000372056 C1orf141Q5JVX7 400 aa16.65■□□□□ 0.26
LDB3-203ENST00000372056 KDM2BQ8NHM5 1336 aa16.65■□□□□ 0.26
LDB3-203ENST00000372056 MAP3K5Q99683 1374 aa16.65■□□□□ 0.26
LDB3-203ENST00000372056 OVOS2A0A0G2JMS6 1433 aa16.64■□□□□ 0.25
LDB3-203ENST00000372056 HSP90AB1P08238 724 aaKnown RBP16.64■□□□□ 0.25
LDB3-203ENST00000372056 ZNF853P0CG23 659 aa16.64■□□□□ 0.25
LDB3-203ENST00000372056 TOM1L2Q6ZVM7 507 aa16.64■□□□□ 0.25
LDB3-203ENST00000372056 PANK1Q8TE04 598 aa16.64■□□□□ 0.25
LDB3-203ENST00000372056 SOS1Q07889 1333 aaPredicted RBP16.63■□□□□ 0.25
LDB3-203ENST00000372056 ILDR1Q86SU0 546 aaPredicted RBP16.63■□□□□ 0.25
LDB3-203ENST00000372056 CRB1P82279 1406 aa16.62■□□□□ 0.25
LDB3-203ENST00000372056 SSH1Q8WYL5 1049 aa16.62■□□□□ 0.25
LDB3-203ENST00000372056 CDCA7Q9BWT1 371 aaPredicted RBP16.62■□□□□ 0.25
LDB3-203ENST00000372056 SMC4Q9NTJ3 1288 aa16.62■□□□□ 0.25
LDB3-203ENST00000372056 COG6Q9Y2V7 657 aa16.61■□□□□ 0.25
LDB3-203ENST00000372056 RGPD2P0DJD1 1756 aa16.61■□□□□ 0.25
LDB3-203ENST00000372056 RLBP1P12271 317 aa16.61■□□□□ 0.25
LDB3-203ENST00000372056 CENPQQ7L2Z9 268 aaPredicted RBP16.61■□□□□ 0.25
LDB3-203ENST00000372056 USHBP1Q8N6Y0 703 aa16.61■□□□□ 0.25
LDB3-203ENST00000372056 THRAP3Q9Y2W1 955 aaKnown RBP16.61■□□□□ 0.25
LDB3-203ENST00000372056 LAS1LQ9Y4W2 734 aaKnown RBP16.61■□□□□ 0.25
LDB3-203ENST00000372056 ZKSCAN2Q63HK3 967 aa16.6■□□□□ 0.25
LDB3-203ENST00000372056 ZNF530Q6P9A1 599 aaPredicted RBP16.6■□□□□ 0.25
LDB3-203ENST00000372056 BTG4Q9NY30 223 aa16.6■□□□□ 0.25
LDB3-203ENST00000372056 TNNQ9UQP3 1299 aa16.6■□□□□ 0.25
LDB3-203ENST00000372056 CHL1O00533 1208 aa16.59■□□□□ 0.25
LDB3-203ENST00000372056 MBIPQ9NS73 344 aa16.59■□□□□ 0.25
LDB3-203ENST00000372056 PARP4Q9UKK3 1724 aaKnown RBP16.59■□□□□ 0.25
LDB3-203ENST00000372056 NWD2Q9ULI1 1742 aa16.59■□□□□ 0.25
LDB3-203ENST00000372056 IL2RBP14784 551 aa16.59■□□□□ 0.25
LDB3-203ENST00000372056 AAMPQ13685 434 aa16.59■□□□□ 0.25
LDB3-203ENST00000372056 ALDH1L2Q3SY69 923 aa16.59■□□□□ 0.25
LDB3-203ENST00000372056 IFNL2Q8IZJ0 200 aa16.59■□□□□ 0.25
LDB3-203ENST00000372056 CLUAP1Q96AJ1 413 aa16.59■□□□□ 0.25
LDB3-203ENST00000372056 DCTN1Q14203 1278 aa16.58■□□□□ 0.24
LDB3-203ENST00000372056 TCERG1O14776 1098 aaKnown RBP16.57■□□□□ 0.24
LDB3-203ENST00000372056 MS4A1P11836 297 aa16.57■□□□□ 0.24
LDB3-203ENST00000372056 TAF7Q15545 349 aaPredicted RBP16.57■□□□□ 0.24
LDB3-203ENST00000372056 CEMIPQ8WUJ3 1361 aa16.57■□□□□ 0.24
LDB3-203ENST00000372056 KIF16BQ96L93 1317 aa16.57■□□□□ 0.24
LDB3-203ENST00000372056 ANP32EQ9BTT0 268 aa16.56■□□□□ 0.24
LDB3-203ENST00000372056 VAMP4O75379 141 aa16.56■□□□□ 0.24
LDB3-203ENST00000372056 TRIM27P14373 513 aa16.56■□□□□ 0.24
LDB3-203ENST00000372056 BRPF1P55201 1214 aaPredicted RBP16.56■□□□□ 0.24
LDB3-203ENST00000372056 DZIP1LQ8IYY4 767 aaKnown RBP16.56■□□□□ 0.24
LDB3-203ENST00000372056 STRN4Q9NRL3 753 aa16.56■□□□□ 0.24
LDB3-203ENST00000372056 PCDH11XQ9BZA7 1347 aa16.55■□□□□ 0.24
LDB3-203ENST00000372056 PCDH11YQ9BZA8 1340 aa16.55■□□□□ 0.24
LDB3-203ENST00000372056 TEFQ10587 303 aa16.55■□□□□ 0.24
LDB3-203ENST00000372056 ATF7IPQ6VMQ6 1270 aa16.55■□□□□ 0.24
LDB3-203ENST00000372056 ZCRB1Q8TBF4 217 aaKnown RBP16.55■□□□□ 0.24
LDB3-203ENST00000372056 PKD1L3Q7Z443 1732 aa16.55■□□□□ 0.24
LDB3-203ENST00000372056 MVPQ14764 893 aaKnown RBP16.54■□□□□ 0.24
LDB3-203ENST00000372056 LARP1Q6PKG0 1096 aaKnown RBP16.54■□□□□ 0.24
LDB3-203ENST00000372056 MCM10Q7L590 875 aa16.54■□□□□ 0.24
LDB3-203ENST00000372056 FTSJ3Q8IY81 847 aaKnown RBP16.54■□□□□ 0.24
LDB3-203ENST00000372056 TSPYL6Q8N831 410 aa16.54■□□□□ 0.24
LDB3-203ENST00000372056 DCAF5Q96JK2 942 aa16.54■□□□□ 0.24
LDB3-203ENST00000372056 NOB1Q9ULX3 412 aaKnown RBP16.54■□□□□ 0.24
LDB3-203ENST00000372056 LRRC37A3O60309 1634 aa16.53■□□□□ 0.24
LDB3-203ENST00000372056 SLIT2O94813 1529 aa16.53■□□□□ 0.24
LDB3-203ENST00000372056 IL17REQ8NFR9 667 aa16.53■□□□□ 0.24
LDB3-203ENST00000372056 NUTM2BA6NNL0 878 aaPredicted RBP16.52■□□□□ 0.24
LDB3-203ENST00000372056 NUTM2EB1AL46 878 aaPredicted RBP16.52■□□□□ 0.24
LDB3-203ENST00000372056 IPO8O15397 1037 aaKnown RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms