RNA–Protein interactions for RNA: ENST00000371781.3

LCN1-202, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-202ENST00000371781 VIRMAQ69YN4 1812 aaKnown RBP14.32□□□□□ -0.12
LCN1-202ENST00000371781 SLFN5Q08AF3 891 aa14.32□□□□□ -0.12
LCN1-202ENST00000371781 THUMPD2Q9BTF0 503 aaKnown RBP14.32□□□□□ -0.12
LCN1-202ENST00000371781 WDR17Q8IZU2 1322 aa14.32□□□□□ -0.12
LCN1-202ENST00000371781 PARP4Q9UKK3 1724 aaKnown RBP14.32□□□□□ -0.12
LCN1-202ENST00000371781 EP400Q96L91 3159 aa14.32□□□□□ -0.12
LCN1-202ENST00000371781 ATRNO75882 1429 aa14.32□□□□□ -0.12
LCN1-202ENST00000371781 SLIT2O94813 1529 aa14.31□□□□□ -0.12
LCN1-202ENST00000371781 RIPK4P57078 832 aa14.31□□□□□ -0.12
LCN1-202ENST00000371781 PDE3BQ13370 1112 aa14.31□□□□□ -0.12
LCN1-202ENST00000371781 NGEFQ8N5V2 710 aa14.31□□□□□ -0.12
LCN1-202ENST00000371781 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.3□□□□□ -0.12
LCN1-202ENST00000371781 HAP1P54257 671 aaPredicted RBP14.3□□□□□ -0.12
LCN1-202ENST00000371781 GOLGA2Q08379 1002 aa14.3□□□□□ -0.12
LCN1-202ENST00000371781 PNNQ9H307 717 aaKnown RBP14.3□□□□□ -0.12
LCN1-202ENST00000371781 TRPC5Q9UL62 973 aaPredicted RBP14.3□□□□□ -0.12
LCN1-202ENST00000371781 CRB1P82279 1406 aa14.3□□□□□ -0.12
LCN1-202ENST00000371781 SRCAPQ6ZRS2 3230 aa14.29□□□□□ -0.12
LCN1-202ENST00000371781 DCTN1Q14203 1278 aa14.29□□□□□ -0.12
LCN1-202ENST00000371781 LARP1Q6PKG0 1096 aaKnown RBP14.29□□□□□ -0.12
LCN1-202ENST00000371781 FNBP4Q8N3X1 1017 aaPredicted RBP14.29□□□□□ -0.12
LCN1-202ENST00000371781 OVOS2A0A0G2JMS6 1433 aa14.29□□□□□ -0.12
LCN1-202ENST00000371781 DISP2A7MBM2 1401 aa14.29□□□□□ -0.12
LCN1-202ENST00000371781 BRWD3Q6RI45 1802 aa14.29□□□□□ -0.12
LCN1-202ENST00000371781 SIPA1L3O60292 1781 aaPredicted RBP14.28□□□□□ -0.12
LCN1-202ENST00000371781 WDR63Q8IWG1 891 aa14.28□□□□□ -0.12
LCN1-202ENST00000371781 NLRP2Q9NX02 1062 aa14.28□□□□□ -0.12
LCN1-202ENST00000371781 BCL9LQ86UU0 1499 aa14.27□□□□□ -0.12
LCN1-202ENST00000371781 MAP3K5Q99683 1374 aa14.27□□□□□ -0.12
LCN1-202ENST00000371781 BTG4Q9NY30 223 aa14.27□□□□□ -0.13
LCN1-202ENST00000371781 FANCIQ9NVI1 1328 aa14.26□□□□□ -0.13
LCN1-202ENST00000371781 KDM6AO15550 1401 aaPredicted RBP14.25□□□□□ -0.13
LCN1-202ENST00000371781 PLEKHG2Q9H7P9 1386 aa14.25□□□□□ -0.13
LCN1-202ENST00000371781 SCN11AQ9UI33 1791 aa14.25□□□□□ -0.13
LCN1-202ENST00000371781 IL16Q14005 1332 aa14.25□□□□□ -0.13
LCN1-202ENST00000371781 TOGARAM1Q9Y4F4 1720 aa14.25□□□□□ -0.13
LCN1-202ENST00000371781 E9PSI1 815 aa14.25□□□□□ -0.13
LCN1-202ENST00000371781 ZNF853P0CG23 659 aa14.25□□□□□ -0.13
LCN1-202ENST00000371781 CSB-PGBD3P0DP91 1061 aa14.25□□□□□ -0.13
LCN1-202ENST00000371781 MCM10Q7L590 875 aa14.25□□□□□ -0.13
LCN1-202ENST00000371781 GAS2L2Q8NHY3 880 aa14.25□□□□□ -0.13
LCN1-202ENST00000371781 TSR2Q969E8 191 aaKnown RBP14.25□□□□□ -0.13
LCN1-202ENST00000371781 STRN4Q9NRL3 753 aa14.25□□□□□ -0.13
LCN1-202ENST00000371781 GLI3P10071 1580 aa14.25□□□□□ -0.13
LCN1-202ENST00000371781 KDM3BQ7LBC6 1761 aa14.24□□□□□ -0.13
LCN1-202ENST00000371781 RNF123Q5XPI4 1314 aa14.24□□□□□ -0.13
LCN1-202ENST00000371781 CARD10Q9BWT7 1032 aa14.24□□□□□ -0.13
LCN1-202ENST00000371781 CEMIPQ8WUJ3 1361 aa14.23□□□□□ -0.13
LCN1-202ENST00000371781 TOM1L2Q6ZVM7 507 aa14.23□□□□□ -0.13
LCN1-202ENST00000371781 MRC1P22897 1456 aa14.23□□□□□ -0.13
LCN1-202ENST00000371781 NEFMP07197 916 aa14.22□□□□□ -0.13
LCN1-202ENST00000371781 IL17REQ8NFR9 667 aa14.22□□□□□ -0.13
LCN1-202ENST00000371781 LMOD3Q0VAK6 560 aa14.21□□□□□ -0.13
LCN1-202ENST00000371781 ZNF530Q6P9A1 599 aaPredicted RBP14.21□□□□□ -0.13
LCN1-202ENST00000371781 SUPT16HQ9Y5B9 1047 aaKnown RBP14.21□□□□□ -0.13
LCN1-202ENST00000371781 CYP27B1O15528 508 aa14.2□□□□□ -0.14
LCN1-202ENST00000371781 TATP17735 454 aaPredicted RBP14.2□□□□□ -0.14
LCN1-202ENST00000371781 GJD4Q96KN9 370 aaPredicted RBP14.2□□□□□ -0.14
LCN1-202ENST00000371781 MBIPQ9NS73 344 aa14.2□□□□□ -0.14
LCN1-202ENST00000371781 GNAT3A8MTJ3 354 aa14.19□□□□□ -0.14
LCN1-202ENST00000371781 AMOTQ4VCS5 1084 aa14.19□□□□□ -0.14
LCN1-202ENST00000371781 PLEKHO1Q53GL0 409 aaPredicted RBP14.19□□□□□ -0.14
LCN1-202ENST00000371781 RAPGEF4Q8WZA2 1011 aa14.19□□□□□ -0.14
LCN1-202ENST00000371781 LGR6Q9HBX8 967 aa14.19□□□□□ -0.14
LCN1-202ENST00000371781 IFT57Q9NWB7 429 aa14.19□□□□□ -0.14
LCN1-202ENST00000371781 THSD7AQ9UPZ6 1657 aa14.18□□□□□ -0.14
LCN1-202ENST00000371781 HTATSF1O43719 755 aaKnown RBP14.18□□□□□ -0.14
LCN1-202ENST00000371781 PHKG2P15735 406 aa14.18□□□□□ -0.14
LCN1-202ENST00000371781 AKAP4Q5JQC9 854 aa14.18□□□□□ -0.14
LCN1-202ENST00000371781 RCAN3Q9UKA8 241 aa14.18□□□□□ -0.14
LCN1-202ENST00000371781 PAPPAQ13219 1627 aa14.18□□□□□ -0.14
LCN1-202ENST00000371781 SPATA31A1Q5TZJ5 1347 aa14.17□□□□□ -0.14
LCN1-202ENST00000371781 TNS2Q63HR2 1409 aa14.17□□□□□ -0.14
LCN1-202ENST00000371781 CHL1O00533 1208 aa14.17□□□□□ -0.14
LCN1-202ENST00000371781 EVA1CP58658 441 aa14.17□□□□□ -0.14
LCN1-202ENST00000371781 EXOSC9Q06265 439 aaKnown RBP14.17□□□□□ -0.14
LCN1-202ENST00000371781 CFAP44Q96MT7 982 aa14.17□□□□□ -0.14
LCN1-202ENST00000371781 MYH16Q9H6N6 1097 aa14.17□□□□□ -0.14
LCN1-202ENST00000371781 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.17□□□□□ -0.14
LCN1-202ENST00000371781 SPATA31A5Q5VU36 1347 aa14.16□□□□□ -0.14
LCN1-202ENST00000371781 SPATA31A7Q8IWB4 1347 aa14.16□□□□□ -0.14
LCN1-202ENST00000371781 RNMTO43148 476 aaKnown RBP14.16□□□□□ -0.14
LCN1-202ENST00000371781 IL2RBP14784 551 aa14.16□□□□□ -0.14
LCN1-202ENST00000371781 KRT24Q2M2I5 525 aa14.16□□□□□ -0.14
LCN1-202ENST00000371781 MPRIPQ6WCQ1 1025 aa14.16□□□□□ -0.14
LCN1-202ENST00000371781 CCDC125Q86Z20 511 aa14.16□□□□□ -0.14
LCN1-202ENST00000371781 USP35Q9P2H5 1018 aa14.16□□□□□ -0.14
LCN1-202ENST00000371781 GNAI1P63096 354 aa14.15□□□□□ -0.14
LCN1-202ENST00000371781 UNC5CLQ8IV45 518 aa14.15□□□□□ -0.14
LCN1-202ENST00000371781 TSPYL6Q8N831 410 aa14.15□□□□□ -0.14
LCN1-202ENST00000371781 MIS18AQ9NYP9 233 aa14.15□□□□□ -0.14
LCN1-202ENST00000371781 LAS1LQ9Y4W2 734 aaKnown RBP14.15□□□□□ -0.14
LCN1-202ENST00000371781 GTF3C3Q9Y5Q9 886 aa14.15□□□□□ -0.14
LCN1-202ENST00000371781 RRP1P56182 461 aaKnown RBP14.14□□□□□ -0.15
LCN1-202ENST00000371781 IRX6P78412 446 aaPredicted RBP14.14□□□□□ -0.15
LCN1-202ENST00000371781 C8orf58Q8NAV2 365 aa14.14□□□□□ -0.15
LCN1-202ENST00000371781 C5P01031 1676 aa14.14□□□□□ -0.15
LCN1-202ENST00000371781 DOT1LQ8TEK3 1739 aa14.13□□□□□ -0.15
LCN1-202ENST00000371781 CALD1Q05682 793 aaKnown RBP14.13□□□□□ -0.15
LCN1-202ENST00000371781 DEFB132Q7Z7B7 95 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms