RNA–Protein interactions for RNA: ENST00000371648.4

EDF1-202, Transcript of endothelial differentiation related factor 1, humanhuman

TSL 1 (best) BASIC

Gene EDF1, Length 809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1-202ENST00000371648 NBPF6Q5VWK0 638 aa19.8■□□□□ 0.76
EDF1-202ENST00000371648 USHBP1Q8N6Y0 703 aa19.8■□□□□ 0.76
EDF1-202ENST00000371648 ZCRB1Q8TBF4 217 aaKnown RBP19.8■□□□□ 0.76
EDF1-202ENST00000371648 NBPF4Q96M43 638 aa19.8■□□□□ 0.76
EDF1-202ENST00000371648 LRRC4BQ9NT99 713 aa19.8■□□□□ 0.76
EDF1-202ENST00000371648 ZNF827Q17R98 1081 aa19.78■□□□□ 0.76
EDF1-202ENST00000371648 MTFR1LQ9H019 292 aa19.78■□□□□ 0.76
EDF1-202ENST00000371648 RTL1A6NKG5 1358 aa19.78■□□□□ 0.76
EDF1-202ENST00000371648 BTAF1O14981 1849 aa19.78■□□□□ 0.76
EDF1-202ENST00000371648 FAM208AQ9UK61 1670 aaKnown RBP19.78■□□□□ 0.76
EDF1-202ENST00000371648 PPM1GO15355 546 aaPredicted RBP19.77■□□□□ 0.76
EDF1-202ENST00000371648 YY1P25490 414 aa19.77■□□□□ 0.76
EDF1-202ENST00000371648 TNNT2P45379 298 aaPredicted RBP19.77■□□□□ 0.76
EDF1-202ENST00000371648 HSP90AB2PQ58FF8 381 aa19.77■□□□□ 0.76
EDF1-202ENST00000371648 MEGF6O75095 1541 aa19.76■□□□□ 0.75
EDF1-202ENST00000371648 KCNQ4P56696 695 aa19.76■□□□□ 0.75
EDF1-202ENST00000371648 RAPGEF4Q8WZA2 1011 aa19.75■□□□□ 0.75
EDF1-202ENST00000371648 RGPD2P0DJD1 1756 aa19.75■□□□□ 0.75
EDF1-202ENST00000371648 WASHC2AQ641Q2 1341 aa19.75■□□□□ 0.75
EDF1-202ENST00000371648 ZEB1P37275 1124 aaPredicted RBP19.74■□□□□ 0.75
EDF1-202ENST00000371648 SLC27A3Q5K4L6 730 aa19.74■□□□□ 0.75
EDF1-202ENST00000371648 FHDC1Q9C0D6 1143 aaPredicted RBP19.74■□□□□ 0.75
EDF1-202ENST00000371648 SMG6Q86US8 1419 aaKnown RBP19.74■□□□□ 0.75
EDF1-202ENST00000371648 MORC1Q86VD1 984 aa19.73■□□□□ 0.75
EDF1-202ENST00000371648 AKT1S1Q96B36 256 aa19.73■□□□□ 0.75
EDF1-202ENST00000371648 SGIP1Q9BQI5 828 aa19.73■□□□□ 0.75
EDF1-202ENST00000371648 INSRP06213 1382 aa19.72■□□□□ 0.75
EDF1-202ENST00000371648 TATP17735 454 aaPredicted RBP19.72■□□□□ 0.75
EDF1-202ENST00000371648 SYT17Q9BSW7 474 aa19.72■□□□□ 0.75
EDF1-202ENST00000371648 PAPPAQ13219 1627 aa19.72■□□□□ 0.75
EDF1-202ENST00000371648 FLT4P35916 1363 aa19.71■□□□□ 0.75
EDF1-202ENST00000371648 CNGB1Q14028 1251 aaPredicted RBP19.71■□□□□ 0.75
EDF1-202ENST00000371648 EMILIN1Q9Y6C2 1016 aa19.71■□□□□ 0.75
EDF1-202ENST00000371648 NSD2O96028 1365 aa19.7■□□□□ 0.74
EDF1-202ENST00000371648 ARXQ96QS3 562 aa19.7■□□□□ 0.74
EDF1-202ENST00000371648 TFCP2L1Q9NZI6 479 aa19.7■□□□□ 0.74
EDF1-202ENST00000371648 MAP2P11137 1827 aaKnown RBP19.69■□□□□ 0.74
EDF1-202ENST00000371648 CCNL1Q9UK58 526 aaPredicted RBP19.68■□□□□ 0.74
EDF1-202ENST00000371648 KIF24Q5T7B8 1368 aa19.68■□□□□ 0.74
EDF1-202ENST00000371648 DOT1LQ8TEK3 1739 aa19.68■□□□□ 0.74
EDF1-202ENST00000371648 CC2D1BQ5T0F9 858 aaKnown RBP19.67■□□□□ 0.74
EDF1-202ENST00000371648 POLKQ9UBT6 870 aa19.67■□□□□ 0.74
EDF1-202ENST00000371648 PNPLA7Q6ZV29 1317 aa19.67■□□□□ 0.74
EDF1-202ENST00000371648 SHANK3Q9BYB0 1731 aa19.67■□□□□ 0.74
EDF1-202ENST00000371648 ANKRD26Q9UPS8 1709 aa19.66■□□□□ 0.74
EDF1-202ENST00000371648 PCDH11XQ9BZA7 1347 aa19.66■□□□□ 0.74
EDF1-202ENST00000371648 PCDH11YQ9BZA8 1340 aa19.66■□□□□ 0.74
EDF1-202ENST00000371648 PER1O15534 1290 aaPredicted RBP19.65■□□□□ 0.74
EDF1-202ENST00000371648 AMER1Q5JTC6 1135 aaPredicted RBP19.65■□□□□ 0.74
EDF1-202ENST00000371648 SLC16A10Q8TF71 515 aa19.65■□□□□ 0.74
EDF1-202ENST00000371648 CYP27B1O15528 508 aa19.64■□□□□ 0.73
EDF1-202ENST00000371648 MPRIPQ6WCQ1 1025 aa19.64■□□□□ 0.73
EDF1-202ENST00000371648 POLD1P28340 1107 aa19.63■□□□□ 0.73
EDF1-202ENST00000371648 KLHL34Q8N239 644 aa19.63■□□□□ 0.73
EDF1-202ENST00000371648 MSH5O43196 834 aa19.62■□□□□ 0.73
EDF1-202ENST00000371648 EYA1Q99502 592 aa19.61■□□□□ 0.73
EDF1-202ENST00000371648 LY75O60449 1722 aa19.6■□□□□ 0.73
EDF1-202ENST00000371648 COL23A1Q86Y22 540 aaPredicted RBP19.59■□□□□ 0.73
EDF1-202ENST00000371648 SPG7Q9UQ90 795 aa19.59■□□□□ 0.73
EDF1-202ENST00000371648 PALLDQ8WX93 1383 aa19.58■□□□□ 0.73
EDF1-202ENST00000371648 MAP3K5Q99683 1374 aa19.58■□□□□ 0.73
EDF1-202ENST00000371648 GPR162Q16538 588 aa19.56■□□□□ 0.72
EDF1-202ENST00000371648 PIGBQ92521 554 aa19.56■□□□□ 0.72
EDF1-202ENST00000371648 UTRNP46939 3433 aa19.56■□□□□ 0.72
EDF1-202ENST00000371648 QSER1Q2KHR3 1735 aa19.56■□□□□ 0.72
EDF1-202ENST00000371648 MTHFSP49914 203 aa19.55■□□□□ 0.72
EDF1-202ENST00000371648 EIF4A2Q14240 407 aaKnown RBP19.55■□□□□ 0.72
EDF1-202ENST00000371648 NCAPD2Q15021 1401 aa19.55■□□□□ 0.72
EDF1-202ENST00000371648 NKX1-1Q15270 411 aaPredicted RBP19.55■□□□□ 0.72
EDF1-202ENST00000371648 MSL1Q68DK7 614 aa19.55■□□□□ 0.72
EDF1-202ENST00000371648 SMARCC1Q92922 1105 aaPredicted RBP19.55■□□□□ 0.72
EDF1-202ENST00000371648 TUBGCP6Q96RT7 1819 aa19.54■□□□□ 0.72
EDF1-202ENST00000371648 PELP1Q8IZL8 1130 aaKnown RBP19.54■□□□□ 0.72
EDF1-202ENST00000371648 NLGN2Q8NFZ4 835 aa19.53■□□□□ 0.72
EDF1-202ENST00000371648 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.53■□□□□ 0.72
EDF1-202ENST00000371648 NPC1L1Q9UHC9 1359 aa19.53■□□□□ 0.72
EDF1-202ENST00000371648 HMGB2P26583 209 aaKnown RBP19.52■□□□□ 0.72
EDF1-202ENST00000371648 DDX10Q13206 875 aaKnown RBP19.52■□□□□ 0.72
EDF1-202ENST00000371648 IFNL2Q8IZJ0 200 aa19.52■□□□□ 0.72
EDF1-202ENST00000371648 ZNF784Q8NCA9 323 aaPredicted RBP19.52■□□□□ 0.72
EDF1-202ENST00000371648 PHKG2P15735 406 aa19.51■□□□□ 0.71
EDF1-202ENST00000371648 AK7Q96M32 723 aa19.51■□□□□ 0.71
EDF1-202ENST00000371648 PKD1L3Q7Z443 1732 aa19.51■□□□□ 0.71
EDF1-202ENST00000371648 SMIM5Q71RC9 77 aa19.5■□□□□ 0.71
EDF1-202ENST00000371648 FLAD1Q8NFF5 587 aa19.5■□□□□ 0.71
EDF1-202ENST00000371648 TMOD3Q9NYL9 352 aa19.5■□□□□ 0.71
EDF1-202ENST00000371648 TOGARAM1Q9Y4F4 1720 aa19.5■□□□□ 0.71
EDF1-202ENST00000371648 ASAP1Q9ULH1 1129 aa19.49■□□□□ 0.71
EDF1-202ENST00000371648 COL24A1Q17RW2 1714 aa19.48■□□□□ 0.71
EDF1-202ENST00000371648 LOC102724428A0A0B4J2F2 783 aa19.48■□□□□ 0.71
EDF1-202ENST00000371648 PHF14O94880 888 aa19.48■□□□□ 0.71
EDF1-202ENST00000371648 SIK1P57059 783 aa19.48■□□□□ 0.71
EDF1-202ENST00000371648 AMIGO3Q86WK7 504 aa19.48■□□□□ 0.71
EDF1-202ENST00000371648 C5P01031 1676 aa19.48■□□□□ 0.71
EDF1-202ENST00000371648 ITGB4P16144 1822 aa19.47■□□□□ 0.71
EDF1-202ENST00000371648 DIAPH1O60610 1272 aaKnown RBP19.46■□□□□ 0.71
EDF1-202ENST00000371648 LINC00116Q8NCU8 138 aa19.46■□□□□ 0.71
EDF1-202ENST00000371648 IGSF1Q8N6C5 1336 aa19.46■□□□□ 0.71
EDF1-202ENST00000371648 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.45■□□□□ 0.7
EDF1-202ENST00000371648 IL13P35225 146 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms