RNA–Protein interactions for RNA: ENST00000371601.4

NPDC1-202, Transcript of neural proliferation, differentiation and control 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NPDC1, Length 1,494 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPDC1-202ENST00000371601 CAMKK2Q96RR4 588 aa27.73■■■□□ 2.03
NPDC1-202ENST00000371601 IL13P35225 146 aa27.72■■■□□ 2.03
NPDC1-202ENST00000371601 SPG7Q9UQ90 795 aa27.72■■■□□ 2.03
NPDC1-202ENST00000371601 SYTL4Q96C24 671 aaPredicted RBP27.71■■■□□ 2.03
NPDC1-202ENST00000371601 WNK3Q9BYP7 1800 aa27.71■■■□□ 2.03
NPDC1-202ENST00000371601 BCL9O00512 1426 aa27.7■■■□□ 2.02
NPDC1-202ENST00000371601 DIAPH1O60610 1272 aaKnown RBP27.7■■■□□ 2.02
NPDC1-202ENST00000371601 SULT6B1Q6IMI4 303 aa27.7■■■□□ 2.02
NPDC1-202ENST00000371601 IGSF1Q8N6C5 1336 aa27.69■■■□□ 2.02
NPDC1-202ENST00000371601 PRIM1P49642 420 aaKnown RBP27.68■■■□□ 2.02
NPDC1-202ENST00000371601 PCDH11XQ9BZA7 1347 aa27.67■■■□□ 2.02
NPDC1-202ENST00000371601 PCDH11YQ9BZA8 1340 aa27.67■■■□□ 2.02
NPDC1-202ENST00000371601 PLSCR1O15162 318 aa27.66■■■□□ 2.02
NPDC1-202ENST00000371601 AEBP1Q8IUX7 1158 aa27.66■■■□□ 2.02
NPDC1-202ENST00000371601 RGPD1P0DJD0 1748 aa27.66■■■□□ 2.02
NPDC1-202ENST00000371601 CYP27B1O15528 508 aa27.65■■■□□ 2.02
NPDC1-202ENST00000371601 PPP2R1AP30153 589 aa27.65■■■□□ 2.02
NPDC1-202ENST00000371601 CFAP53Q96M91 514 aa27.64■■■□□ 2.02
NPDC1-202ENST00000371601 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.64■■■□□ 2.02
NPDC1-202ENST00000371601 KAT6BQ8WYB5 2073 aa27.64■■■□□ 2.02
NPDC1-202ENST00000371601 PLEKHO1Q53GL0 409 aaPredicted RBP27.64■■■□□ 2.01
NPDC1-202ENST00000371601 U2SURPO15042 1029 aaKnown RBP27.63■■■□□ 2.01
NPDC1-202ENST00000371601 HMOX1P09601 288 aa27.63■■■□□ 2.01
NPDC1-202ENST00000371601 NCAPD2Q15021 1401 aa27.61■■■□□ 2.01
NPDC1-202ENST00000371601 IFNL2Q8IZJ0 200 aa27.6■■■□□ 2.01
NPDC1-202ENST00000371601 PARD3Q8TEW0 1356 aa27.6■■■□□ 2.01
NPDC1-202ENST00000371601 AMOTQ4VCS5 1084 aa27.59■■■□□ 2.01
NPDC1-202ENST00000371601 NBPF14Q5TI25 921 aa27.58■■■□□ 2.01
NPDC1-202ENST00000371601 PSDA5PKW4 1024 aaPredicted RBP27.57■■■□□ 2
NPDC1-202ENST00000371601 MPRIPQ6WCQ1 1025 aa27.57■■■□□ 2
NPDC1-202ENST00000371601 PROM2Q8N271 834 aa27.57■■■□□ 2
NPDC1-202ENST00000371601 TNS1Q9HBL0 1735 aaKnown RBP27.57■■■□□ 2
NPDC1-202ENST00000371601 PHKG2P15735 406 aa27.57■■■□□ 2
NPDC1-202ENST00000371601 TXNRD1Q16881 649 aa27.57■■■□□ 2
NPDC1-202ENST00000371601 ZNF530Q6P9A1 599 aaPredicted RBP27.56■■■□□ 2
NPDC1-202ENST00000371601 NUDCQ9Y266 331 aa27.56■■■□□ 2
NPDC1-202ENST00000371601 ZNF316A6NFI3 1004 aaPredicted RBP27.55■■■□□ 2
NPDC1-202ENST00000371601 R3HDM1Q15032 1099 aaKnown RBP27.55■■■□□ 2
NPDC1-202ENST00000371601 SBF2Q86WG5 1849 aa27.54■■■□□ 2
NPDC1-202ENST00000371601 NKX1-1Q15270 411 aaPredicted RBP27.54■■■□□ 2
NPDC1-202ENST00000371601 C1orf141Q5JVX7 400 aa27.53■■■□□ 2
NPDC1-202ENST00000371601 RALBP1Q15311 655 aa27.52■■■□□ 2
NPDC1-202ENST00000371601 KDRP35968 1356 aa27.5■■□□□ 1.99
NPDC1-202ENST00000371601 HSP90AB1P08238 724 aaKnown RBP27.5■■□□□ 1.99
NPDC1-202ENST00000371601 U2AF1L5P0DN76 240 aaPredicted RBP27.49■■□□□ 1.99
NPDC1-202ENST00000371601 U2AF1Q01081 240 aaKnown RBP eCLIP27.49■■□□□ 1.99
NPDC1-202ENST00000371601 SRCAPQ6ZRS2 3230 aa27.48■■□□□ 1.99
NPDC1-202ENST00000371601 PIGBQ92521 554 aa27.47■■□□□ 1.99
NPDC1-202ENST00000371601 DCAF5Q96JK2 942 aa27.47■■□□□ 1.99
NPDC1-202ENST00000371601 TMOD3Q9NYL9 352 aa27.47■■□□□ 1.99
NPDC1-202ENST00000371601 PLEKHG2Q9H7P9 1386 aa27.46■■□□□ 1.99
NPDC1-202ENST00000371601 KCNQ4P56696 695 aa27.45■■□□□ 1.99
NPDC1-202ENST00000371601 NHSQ6T4R5 1651 aa27.45■■□□□ 1.99
NPDC1-202ENST00000371601 SHANK3Q9BYB0 1731 aa27.45■■□□□ 1.98
NPDC1-202ENST00000371601 MTHFSDQ2M296 383 aaKnown RBP27.44■■□□□ 1.98
NPDC1-202ENST00000371601 COL3A1P02461 1466 aaPredicted RBP27.44■■□□□ 1.98
NPDC1-202ENST00000371601 LRRC4BQ9NT99 713 aa27.44■■□□□ 1.98
NPDC1-202ENST00000371601 ERVV-2B6SEH9 535 aa27.43■■□□□ 1.98
NPDC1-202ENST00000371601 CABP4P57796 275 aa27.43■■□□□ 1.98
NPDC1-202ENST00000371601 AKAP4Q5JQC9 854 aa27.43■■□□□ 1.98
NPDC1-202ENST00000371601 SLC27A3Q5K4L6 730 aa27.43■■□□□ 1.98
NPDC1-202ENST00000371601 STK32BQ9NY57 414 aa27.43■■□□□ 1.98
NPDC1-202ENST00000371601 PRKAR2BP31323 418 aa27.41■■□□□ 1.98
NPDC1-202ENST00000371601 SMARCC1Q92922 1105 aaPredicted RBP27.41■■□□□ 1.98
NPDC1-202ENST00000371601 ANO8Q9HCE9 1232 aaPredicted RBP27.41■■□□□ 1.98
NPDC1-202ENST00000371601 CCNL1Q9UK58 526 aaPredicted RBP27.41■■□□□ 1.98
NPDC1-202ENST00000371601 PKD1L3Q7Z443 1732 aa27.41■■□□□ 1.98
NPDC1-202ENST00000371601 BTAF1O14981 1849 aa27.39■■□□□ 1.97
NPDC1-202ENST00000371601 FCHSD2O94868 740 aa27.38■■□□□ 1.97
NPDC1-202ENST00000371601 SLC15A2Q16348 729 aa27.38■■□□□ 1.97
NPDC1-202ENST00000371601 RSPH6AQ9H0K4 717 aa27.38■■□□□ 1.97
NPDC1-202ENST00000371601 ASAP1Q9ULH1 1129 aa27.38■■□□□ 1.97
NPDC1-202ENST00000371601 DOT1LQ8TEK3 1739 aa27.38■■□□□ 1.97
NPDC1-202ENST00000371601 NFATC2IPQ8NCF5 419 aa27.38■■□□□ 1.97
NPDC1-202ENST00000371601 PHACTR3Q96KR7 559 aa27.38■■□□□ 1.97
NPDC1-202ENST00000371601 LGR6Q9HBX8 967 aa27.38■■□□□ 1.97
NPDC1-202ENST00000371601 MYBBP1AQ9BQG0 1328 aaKnown RBP27.37■■□□□ 1.97
NPDC1-202ENST00000371601 GAS2L2Q8NHY3 880 aa27.36■■□□□ 1.97
NPDC1-202ENST00000371601 PRKRIP1Q9H875 184 aaPredicted RBP27.36■■□□□ 1.97
NPDC1-202ENST00000371601 PALLDQ8WX93 1383 aa27.36■■□□□ 1.97
NPDC1-202ENST00000371601 ATG3Q9NT62 314 aa27.34■■□□□ 1.97
NPDC1-202ENST00000371601 RNMTO43148 476 aaKnown RBP27.33■■□□□ 1.97
NPDC1-202ENST00000371601 NEFMP07197 916 aa27.33■■□□□ 1.97
NPDC1-202ENST00000371601 RREB1Q92766 1687 aa27.32■■□□□ 1.96
NPDC1-202ENST00000371601 KDM6AO15550 1401 aaPredicted RBP27.32■■□□□ 1.96
NPDC1-202ENST00000371601 GNAT3A8MTJ3 354 aa27.32■■□□□ 1.96
NPDC1-202ENST00000371601 NUP188Q5SRE5 1749 aa27.31■■□□□ 1.96
NPDC1-202ENST00000371601 RBM42Q9BTD8 480 aaKnown RBP27.31■■□□□ 1.96
NPDC1-202ENST00000371601 TFCP2L1Q9NZI6 479 aa27.31■■□□□ 1.96
NPDC1-202ENST00000371601 RGPD3A6NKT7 1758 aaPredicted RBP27.3■■□□□ 1.96
NPDC1-202ENST00000371601 RGPD4Q7Z3J3 1758 aa27.3■■□□□ 1.96
NPDC1-202ENST00000371601 LOC102724428A0A0B4J2F2 783 aa27.3■■□□□ 1.96
NPDC1-202ENST00000371601 SIK1P57059 783 aa27.3■■□□□ 1.96
NPDC1-202ENST00000371601 ZNF827Q17R98 1081 aa27.3■■□□□ 1.96
NPDC1-202ENST00000371601 PDGFDQ9GZP0 370 aaPredicted RBP27.29■■□□□ 1.96
NPDC1-202ENST00000371601 SLC52A2Q9HAB3 445 aa27.29■■□□□ 1.96
NPDC1-202ENST00000371601 HMGB2P26583 209 aaKnown RBP27.28■■□□□ 1.96
NPDC1-202ENST00000371601 ATP6V1AP38606 617 aa27.28■■□□□ 1.96
NPDC1-202ENST00000371601 AKT1S1Q96B36 256 aa27.28■■□□□ 1.96
NPDC1-202ENST00000371601 PNNQ9H307 717 aaKnown RBP27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms