RNA–Protein interactions for RNA: ENST00000370852.6

HMGCLL1-204, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2

Gene HMGCLL1, Length 2,445 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-204ENST00000370852 CCDC183Q5T5S1 534 aa11.36□□□□□ -0.59
HMGCLL1-204ENST00000370852 INTS3Q68E01 1043 aaKnown RBP11.36□□□□□ -0.59
HMGCLL1-204ENST00000370852 FBXO38Q6PIJ6 1188 aa11.36□□□□□ -0.59
HMGCLL1-204ENST00000370852 KRT222Q8N1A0 295 aa11.36□□□□□ -0.59
HMGCLL1-204ENST00000370852 UPF3BQ9BZI7 483 aaKnown RBP11.36□□□□□ -0.59
HMGCLL1-204ENST00000370852 SRCIN1Q9C0H9 1055 aa11.36□□□□□ -0.59
HMGCLL1-204ENST00000370852 IFT57Q9NWB7 429 aa11.36□□□□□ -0.59
HMGCLL1-204ENST00000370852 IPO8O15397 1037 aaKnown RBP11.35□□□□□ -0.59
HMGCLL1-204ENST00000370852 MX1P20591 662 aa11.35□□□□□ -0.59
HMGCLL1-204ENST00000370852 GTF3C6Q969F1 213 aa11.35□□□□□ -0.59
HMGCLL1-204ENST00000370852 FUCA2Q9BTY2 467 aa11.35□□□□□ -0.59
HMGCLL1-204ENST00000370852 PLEKHD1A6NEE1 506 aa11.35□□□□□ -0.59
HMGCLL1-204ENST00000370852 SLC20A2Q08357 652 aa11.35□□□□□ -0.59
HMGCLL1-204ENST00000370852 FAM184AQ8NB25 1140 aa11.35□□□□□ -0.59
HMGCLL1-204ENST00000370852 ZNF215Q9UL58 517 aaPredicted RBP11.35□□□□□ -0.59
HMGCLL1-204ENST00000370852 CHMP3Q9Y3E7 222 aa11.35□□□□□ -0.59
HMGCLL1-204ENST00000370852 PPRC1Q5VV67 1664 aaKnown RBP11.34□□□□□ -0.59
HMGCLL1-204ENST00000370852 SMTNL1A8MU46 457 aa11.34□□□□□ -0.59
HMGCLL1-204ENST00000370852 GYS2P54840 703 aa11.34□□□□□ -0.59
HMGCLL1-204ENST00000370852 ARID5BQ14865 1188 aa11.34□□□□□ -0.59
HMGCLL1-204ENST00000370852 FIBPO43427 364 aa11.34□□□□□ -0.59
HMGCLL1-204ENST00000370852 PHF14O94880 888 aa11.34□□□□□ -0.59
HMGCLL1-204ENST00000370852 CT47B1P0C2W7 299 aaPredicted RBP11.34□□□□□ -0.59
HMGCLL1-204ENST00000370852 RAD51AP2Q09MP3 1159 aa11.34□□□□□ -0.59
HMGCLL1-204ENST00000370852 ELF2Q15723 593 aa11.34□□□□□ -0.59
HMGCLL1-204ENST00000370852 LUZP1Q86V48 1076 aa11.34□□□□□ -0.59
HMGCLL1-204ENST00000370852 KNDC1Q76NI1 1749 aa11.33□□□□□ -0.6
HMGCLL1-204ENST00000370852 KRT24Q2M2I5 525 aa11.33□□□□□ -0.6
HMGCLL1-204ENST00000370852 LRRN4CLQ8ND94 238 aa11.33□□□□□ -0.6
HMGCLL1-204ENST00000370852 SYTL4Q96C24 671 aaPredicted RBP11.33□□□□□ -0.6
HMGCLL1-204ENST00000370852 FAM53CQ9NYF3 392 aa11.33□□□□□ -0.6
HMGCLL1-204ENST00000370852 ERBB3P21860 1342 aa11.33□□□□□ -0.6
HMGCLL1-204ENST00000370852 MRPL50Q8N5N7 158 aaKnown RBP11.33□□□□□ -0.6
HMGCLL1-204ENST00000370852 CCDC112Q8NEF3 446 aa11.33□□□□□ -0.6
HMGCLL1-204ENST00000370852 NEK11Q8NG66 645 aa11.33□□□□□ -0.6
HMGCLL1-204ENST00000370852 CFAP53Q96M91 514 aa11.33□□□□□ -0.6
HMGCLL1-204ENST00000370852 CLTCL1P53675 1640 aa11.32□□□□□ -0.6
HMGCLL1-204ENST00000370852 ADGRF5Q8IZF2 1346 aa11.32□□□□□ -0.6
HMGCLL1-204ENST00000370852 ADAMTS12P58397 1594 aa11.32□□□□□ -0.6
HMGCLL1-204ENST00000370852 MED14O60244 1454 aa11.32□□□□□ -0.6
HMGCLL1-204ENST00000370852 CUL4AQ13619 759 aa11.32□□□□□ -0.6
HMGCLL1-204ENST00000370852 CAMK4Q16566 473 aa11.32□□□□□ -0.6
HMGCLL1-204ENST00000370852 CALCOCO1Q9P1Z2 691 aa11.32□□□□□ -0.6
HMGCLL1-204ENST00000370852 LCMT1Q9UIC8 334 aa11.32□□□□□ -0.6
HMGCLL1-204ENST00000370852 TARBP1Q13395 1621 aaKnown RBP11.32□□□□□ -0.6
HMGCLL1-204ENST00000370852 TRIM66O15016 1216 aa11.31□□□□□ -0.6
HMGCLL1-204ENST00000370852 ABCC11Q96J66 1382 aa11.31□□□□□ -0.6
HMGCLL1-204ENST00000370852 RPAP1Q9BWH6 1393 aaPredicted RBP11.31□□□□□ -0.6
HMGCLL1-204ENST00000370852 TPD52L1Q16890 204 aaPredicted RBP11.31□□□□□ -0.6
HMGCLL1-204ENST00000370852 CCDC144BQ3MJ40 725 aa11.31□□□□□ -0.6
HMGCLL1-204ENST00000370852 CCDC144CPQ8IYA2 1237 aa11.31□□□□□ -0.6
HMGCLL1-204ENST00000370852 PTPRTO14522 1441 aa11.31□□□□□ -0.6
HMGCLL1-204ENST00000370852 ADGRB2O60241 1585 aa11.31□□□□□ -0.6
HMGCLL1-204ENST00000370852 SAMD9LQ8IVG5 1584 aa11.3□□□□□ -0.6
HMGCLL1-204ENST00000370852 CYP2C19P33261 490 aa11.3□□□□□ -0.6
HMGCLL1-204ENST00000370852 DRC7Q8IY82 874 aa11.3□□□□□ -0.6
HMGCLL1-204ENST00000370852 CACTINQ8WUQ7 758 aaKnown RBP11.3□□□□□ -0.6
HMGCLL1-204ENST00000370852 TRAK1Q9UPV9 953 aa11.3□□□□□ -0.6
HMGCLL1-204ENST00000370852 UNC13BO14795 1591 aa11.3□□□□□ -0.6
HMGCLL1-204ENST00000370852 ERC2O15083 957 aa11.3□□□□□ -0.6
HMGCLL1-204ENST00000370852 SOX12O15370 315 aa11.3□□□□□ -0.6
HMGCLL1-204ENST00000370852 VAMP4O75379 141 aa11.3□□□□□ -0.6
HMGCLL1-204ENST00000370852 FBLN1P23142 703 aa11.3□□□□□ -0.6
HMGCLL1-204ENST00000370852 ZSCAN25Q6NSZ9 544 aa11.3□□□□□ -0.6
HMGCLL1-204ENST00000370852 ZNF397Q8NF99 534 aaPredicted RBP11.3□□□□□ -0.6
HMGCLL1-204ENST00000370852 DCTPP1Q9H773 170 aa11.3□□□□□ -0.6
HMGCLL1-204ENST00000370852 RSPH14Q9UHP6 348 aa11.3□□□□□ -0.6
HMGCLL1-204ENST00000370852 EXOC6BQ9Y2D4 811 aa11.3□□□□□ -0.6
HMGCLL1-204ENST00000370852 SYCP1Q15431 976 aa11.29□□□□□ -0.6
HMGCLL1-204ENST00000370852 TEX2Q8IWB9 1127 aa11.29□□□□□ -0.6
HMGCLL1-204ENST00000370852 NOL10Q9BSC4 688 aaKnown RBP11.29□□□□□ -0.6
HMGCLL1-204ENST00000370852 SENP3Q9H4L4 574 aaPredicted RBP11.29□□□□□ -0.6
HMGCLL1-204ENST00000370852 TTC37Q6PGP7 1564 aa11.29□□□□□ -0.6
HMGCLL1-204ENST00000370852 MAGI1Q96QZ7 1491 aaPredicted RBP11.29□□□□□ -0.6
HMGCLL1-204ENST00000370852 LOC102724159A0A0B4J2E5 919 aa11.29□□□□□ -0.6
HMGCLL1-204ENST00000370852 POLR3GO15318 223 aaPredicted RBP11.29□□□□□ -0.6
HMGCLL1-204ENST00000370852 PRR29P0C7W0 189 aa11.29□□□□□ -0.6
HMGCLL1-204ENST00000370852 PWP2Q15269 919 aaKnown RBP11.29□□□□□ -0.6
HMGCLL1-204ENST00000370852 CEP135Q66GS9 1140 aa11.29□□□□□ -0.6
HMGCLL1-204ENST00000370852 IL25Q9H293 177 aa11.29□□□□□ -0.6
HMGCLL1-204ENST00000370852 TRMT1Q9NXH9 659 aaKnown RBP11.29□□□□□ -0.6
HMGCLL1-204ENST00000370852 ST5P78524 1137 aa11.28□□□□□ -0.6
HMGCLL1-204ENST00000370852 ALDH1L2Q3SY69 923 aa11.28□□□□□ -0.6
HMGCLL1-204ENST00000370852 CKAP2LQ8IYA6 745 aa11.28□□□□□ -0.6
HMGCLL1-204ENST00000370852 SLC52A1Q9NWF4 448 aa11.28□□□□□ -0.6
HMGCLL1-204ENST00000370852 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.28□□□□□ -0.6
HMGCLL1-204ENST00000370852 IQGAP3Q86VI3 1631 aa11.28□□□□□ -0.6
HMGCLL1-204ENST00000370852 CHRM1P11229 460 aaPredicted RBP11.28□□□□□ -0.6
HMGCLL1-204ENST00000370852 DNM1Q05193 864 aaKnown RBP11.28□□□□□ -0.6
HMGCLL1-204ENST00000370852 GGNBP2Q9H3C7 697 aa11.28□□□□□ -0.6
HMGCLL1-204ENST00000370852 REC8O95072 547 aa11.27□□□□□ -0.6
HMGCLL1-204ENST00000370852 SYT10Q6XYQ8 523 aa11.27□□□□□ -0.6
HMGCLL1-204ENST00000370852 C10orf67Q8IYJ2 551 aa11.27□□□□□ -0.6
HMGCLL1-204ENST00000370852 KIF1BPQ96EK5 621 aa11.27□□□□□ -0.6
HMGCLL1-204ENST00000370852 ZCCHC17Q9NP64 241 aaKnown RBP11.27□□□□□ -0.6
HMGCLL1-204ENST00000370852 ERCC6Q03468 1493 aa11.27□□□□□ -0.61
HMGCLL1-204ENST00000370852 UBE2HP62256 183 aa11.27□□□□□ -0.61
HMGCLL1-204ENST00000370852 MRVI1Q9Y6F6 885 aa11.27□□□□□ -0.61
HMGCLL1-204ENST00000370852 SYCP2Q9BX26 1530 aa11.27□□□□□ -0.61
HMGCLL1-204ENST00000370852 SPHKAPQ2M3C7 1700 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms