RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 MTFR1LQ9H019 292 aa20.98■□□□□ 0.95
SS18L1-202ENST00000370848 INSRP06213 1382 aa20.97■□□□□ 0.95
SS18L1-202ENST00000370848 MAP3K5Q99683 1374 aa20.97■□□□□ 0.95
SS18L1-202ENST00000370848 NSD3Q9BZ95 1437 aa20.97■□□□□ 0.95
SS18L1-202ENST00000370848 SLC27A3Q5K4L6 730 aa20.97■□□□□ 0.95
SS18L1-202ENST00000370848 LRRC4BQ9NT99 713 aa20.97■□□□□ 0.95
SS18L1-202ENST00000370848 UTRNP46939 3433 aa20.97■□□□□ 0.95
SS18L1-202ENST00000370848 AMPHP49418 695 aa20.96■□□□□ 0.95
SS18L1-202ENST00000370848 KIF7Q2M1P5 1343 aa20.96■□□□□ 0.95
SS18L1-202ENST00000370848 ZBTB7AO95365 584 aa20.95■□□□□ 0.94
SS18L1-202ENST00000370848 FBLN1P23142 703 aa20.95■□□□□ 0.94
SS18L1-202ENST00000370848 GGNBP2Q9H3C7 697 aa20.95■□□□□ 0.94
SS18L1-202ENST00000370848 FLT4P35916 1363 aa20.95■□□□□ 0.94
SS18L1-202ENST00000370848 TUBGCP6Q96RT7 1819 aa20.94■□□□□ 0.94
SS18L1-202ENST00000370848 ZNF827Q17R98 1081 aa20.94■□□□□ 0.94
SS18L1-202ENST00000370848 AKT1S1Q96B36 256 aa20.94■□□□□ 0.94
SS18L1-202ENST00000370848 SMG6Q86US8 1419 aaKnown RBP20.94■□□□□ 0.94
SS18L1-202ENST00000370848 PKD1L3Q7Z443 1732 aa20.93■□□□□ 0.94
SS18L1-202ENST00000370848 NBPF6Q5VWK0 638 aa20.93■□□□□ 0.94
SS18L1-202ENST00000370848 ZCRB1Q8TBF4 217 aaKnown RBP20.93■□□□□ 0.94
SS18L1-202ENST00000370848 NBPF4Q96M43 638 aa20.93■□□□□ 0.94
SS18L1-202ENST00000370848 RRS1Q15050 365 aaKnown RBP20.92■□□□□ 0.94
SS18L1-202ENST00000370848 LTV1Q96GA3 475 aaPredicted RBP20.92■□□□□ 0.94
SS18L1-202ENST00000370848 DDX54Q8TDD1 881 aaKnown RBP20.91■□□□□ 0.94
SS18L1-202ENST00000370848 SLC16A10Q8TF71 515 aa20.9■□□□□ 0.94
SS18L1-202ENST00000370848 PANK3Q9H999 370 aa20.9■□□□□ 0.94
SS18L1-202ENST00000370848 KAT6BQ8WYB5 2073 aa20.9■□□□□ 0.94
SS18L1-202ENST00000370848 ATF5Q9Y2D1 282 aaPredicted RBP20.89■□□□□ 0.93
SS18L1-202ENST00000370848 PRIM1P49642 420 aaKnown RBP20.88■□□□□ 0.93
SS18L1-202ENST00000370848 SYT17Q9BSW7 474 aa20.88■□□□□ 0.93
SS18L1-202ENST00000370848 PLEKHG2Q9H7P9 1386 aa20.87■□□□□ 0.93
SS18L1-202ENST00000370848 YY1P25490 414 aa20.87■□□□□ 0.93
SS18L1-202ENST00000370848 HSP90AB2PQ58FF8 381 aa20.87■□□□□ 0.93
SS18L1-202ENST00000370848 FHDC1Q9C0D6 1143 aaPredicted RBP20.87■□□□□ 0.93
SS18L1-202ENST00000370848 TOGARAM1Q9Y4F4 1720 aa20.87■□□□□ 0.93
SS18L1-202ENST00000370848 WASHC2AQ641Q2 1341 aa20.86■□□□□ 0.93
SS18L1-202ENST00000370848 PNPLA7Q6ZV29 1317 aa20.86■□□□□ 0.93
SS18L1-202ENST00000370848 PCDH11XQ9BZA7 1347 aa20.85■□□□□ 0.93
SS18L1-202ENST00000370848 PCDH11YQ9BZA8 1340 aa20.85■□□□□ 0.93
SS18L1-202ENST00000370848 DCAF8L1A6NGE4 600 aa20.85■□□□□ 0.93
SS18L1-202ENST00000370848 RAPGEF4Q8WZA2 1011 aa20.85■□□□□ 0.93
SS18L1-202ENST00000370848 C5P01031 1676 aa20.85■□□□□ 0.93
SS18L1-202ENST00000370848 TAF1LQ8IZX4 1826 aa20.84■□□□□ 0.93
SS18L1-202ENST00000370848 ARXQ96QS3 562 aa20.84■□□□□ 0.93
SS18L1-202ENST00000370848 TATP17735 454 aaPredicted RBP20.82■□□□□ 0.92
SS18L1-202ENST00000370848 MAP2P11137 1827 aaKnown RBP20.82■□□□□ 0.92
SS18L1-202ENST00000370848 ITGB4P16144 1822 aa20.82■□□□□ 0.92
SS18L1-202ENST00000370848 CHD4Q14839 1912 aa20.81■□□□□ 0.92
SS18L1-202ENST00000370848 USHBP1Q8N6Y0 703 aa20.81■□□□□ 0.92
SS18L1-202ENST00000370848 EMILIN1Q9Y6C2 1016 aa20.81■□□□□ 0.92
SS18L1-202ENST00000370848 GOLGB1Q14789 3259 aaKnown RBP20.8■□□□□ 0.92
SS18L1-202ENST00000370848 SYTL4Q96C24 671 aaPredicted RBP20.8■□□□□ 0.92
SS18L1-202ENST00000370848 CYP27B1O15528 508 aa20.79■□□□□ 0.92
SS18L1-202ENST00000370848 HMGB2P26583 209 aaKnown RBP20.79■□□□□ 0.92
SS18L1-202ENST00000370848 NKX1-1Q15270 411 aaPredicted RBP20.79■□□□□ 0.92
SS18L1-202ENST00000370848 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.78■□□□□ 0.92
SS18L1-202ENST00000370848 CCNL1Q9UK58 526 aaPredicted RBP20.78■□□□□ 0.92
SS18L1-202ENST00000370848 TNNT2P45379 298 aaPredicted RBP20.76■□□□□ 0.91
SS18L1-202ENST00000370848 TFCP2L1Q9NZI6 479 aa20.76■□□□□ 0.91
SS18L1-202ENST00000370848 PALLDQ8WX93 1383 aa20.75■□□□□ 0.91
SS18L1-202ENST00000370848 KCNQ4P56696 695 aa20.75■□□□□ 0.91
SS18L1-202ENST00000370848 KNSTRNQ9Y448 316 aa20.75■□□□□ 0.91
SS18L1-202ENST00000370848 C4BP0C0L5 1744 aa20.75■□□□□ 0.91
SS18L1-202ENST00000370848 POLKQ9UBT6 870 aa20.74■□□□□ 0.91
SS18L1-202ENST00000370848 POLD1P28340 1107 aa20.73■□□□□ 0.91
SS18L1-202ENST00000370848 AMER1Q5JTC6 1135 aaPredicted RBP20.73■□□□□ 0.91
SS18L1-202ENST00000370848 ZNF831Q5JPB2 1677 aa20.73■□□□□ 0.91
SS18L1-202ENST00000370848 UBR3Q6ZT12 1888 aa20.73■□□□□ 0.91
SS18L1-202ENST00000370848 PER1O15534 1290 aaPredicted RBP20.72■□□□□ 0.91
SS18L1-202ENST00000370848 EYA1Q99502 592 aa20.72■□□□□ 0.91
SS18L1-202ENST00000370848 COL23A1Q86Y22 540 aaPredicted RBP20.71■□□□□ 0.91
SS18L1-202ENST00000370848 PPM1GO15355 546 aaPredicted RBP20.7■□□□□ 0.9
SS18L1-202ENST00000370848 FLAD1Q8NFF5 587 aa20.7■□□□□ 0.9
SS18L1-202ENST00000370848 SMARCC1Q92922 1105 aaPredicted RBP20.7■□□□□ 0.9
SS18L1-202ENST00000370848 SPG7Q9UQ90 795 aa20.7■□□□□ 0.9
SS18L1-202ENST00000370848 MORC1Q86VD1 984 aa20.69■□□□□ 0.9
SS18L1-202ENST00000370848 IGSF1Q8N6C5 1336 aa20.69■□□□□ 0.9
SS18L1-202ENST00000370848 CNGB1Q14028 1251 aaPredicted RBP20.68■□□□□ 0.9
SS18L1-202ENST00000370848 CC2D1BQ5T0F9 858 aaKnown RBP20.67■□□□□ 0.9
SS18L1-202ENST00000370848 MPRIPQ6WCQ1 1025 aa20.67■□□□□ 0.9
SS18L1-202ENST00000370848 ZNF784Q8NCA9 323 aaPredicted RBP20.67■□□□□ 0.9
SS18L1-202ENST00000370848 PIGBQ92521 554 aa20.67■□□□□ 0.9
SS18L1-202ENST00000370848 EIF4A2Q14240 407 aaKnown RBP20.66■□□□□ 0.9
SS18L1-202ENST00000370848 PHKG2P15735 406 aa20.65■□□□□ 0.9
SS18L1-202ENST00000370848 ZEB1P37275 1124 aaPredicted RBP20.64■□□□□ 0.89
SS18L1-202ENST00000370848 IFNL2Q8IZJ0 200 aa20.64■□□□□ 0.89
SS18L1-202ENST00000370848 KDRP35968 1356 aa20.63■□□□□ 0.89
SS18L1-202ENST00000370848 NLGN2Q8NFZ4 835 aa20.63■□□□□ 0.89
SS18L1-202ENST00000370848 CICQ96RK0 1608 aaPredicted RBP20.63■□□□□ 0.89
SS18L1-202ENST00000370848 COL5A3P25940 1745 aaPredicted RBP20.61■□□□□ 0.89
SS18L1-202ENST00000370848 LOC102724428A0A0B4J2F2 783 aa20.61■□□□□ 0.89
SS18L1-202ENST00000370848 SSFA2P28290 1259 aa20.61■□□□□ 0.89
SS18L1-202ENST00000370848 SIK1P57059 783 aa20.61■□□□□ 0.89
SS18L1-202ENST00000370848 AMIGO3Q86WK7 504 aa20.61■□□□□ 0.89
SS18L1-202ENST00000370848 CD2APQ9Y5K6 639 aa20.61■□□□□ 0.89
SS18L1-202ENST00000370848 TMOD3Q9NYL9 352 aa20.59■□□□□ 0.89
SS18L1-202ENST00000370848 NPC1L1Q9UHC9 1359 aa20.59■□□□□ 0.89
SS18L1-202ENST00000370848 GPR162Q16538 588 aa20.58■□□□□ 0.89
SS18L1-202ENST00000370848 AK7Q96M32 723 aa20.58■□□□□ 0.89
SS18L1-202ENST00000370848 ERVV-2B6SEH9 535 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms