RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 MTFR1LQ9H019 292 aa20.98■□□□□ 0.95
SS18L1-202ENST00000370848 INSRP06213 1382 aa20.97■□□□□ 0.95
SS18L1-202ENST00000370848 MAP3K5Q99683 1374 aa20.97■□□□□ 0.95
SS18L1-202ENST00000370848 NSD3Q9BZ95 1437 aa20.97■□□□□ 0.95
SS18L1-202ENST00000370848 SLC27A3Q5K4L6 730 aa20.97■□□□□ 0.95
SS18L1-202ENST00000370848 LRRC4BQ9NT99 713 aa20.97■□□□□ 0.95
SS18L1-202ENST00000370848 UTRNP46939 3433 aa20.97■□□□□ 0.95
SS18L1-202ENST00000370848 AMPHP49418 695 aa20.96■□□□□ 0.95
SS18L1-202ENST00000370848 KIF7Q2M1P5 1343 aa20.96■□□□□ 0.95
SS18L1-202ENST00000370848 ZBTB7AO95365 584 aa20.95■□□□□ 0.94
SS18L1-202ENST00000370848 FBLN1P23142 703 aa20.95■□□□□ 0.94
SS18L1-202ENST00000370848 GGNBP2Q9H3C7 697 aa20.95■□□□□ 0.94
SS18L1-202ENST00000370848 FLT4P35916 1363 aa20.95■□□□□ 0.94
SS18L1-202ENST00000370848 TUBGCP6Q96RT7 1819 aa20.94■□□□□ 0.94
SS18L1-202ENST00000370848 ZNF827Q17R98 1081 aa20.94■□□□□ 0.94
SS18L1-202ENST00000370848 AKT1S1Q96B36 256 aa20.94■□□□□ 0.94
SS18L1-202ENST00000370848 SMG6Q86US8 1419 aaKnown RBP20.94■□□□□ 0.94
SS18L1-202ENST00000370848 PKD1L3Q7Z443 1732 aa20.93■□□□□ 0.94
SS18L1-202ENST00000370848 NBPF6Q5VWK0 638 aa20.93■□□□□ 0.94
SS18L1-202ENST00000370848 ZCRB1Q8TBF4 217 aaKnown RBP20.93■□□□□ 0.94
SS18L1-202ENST00000370848 NBPF4Q96M43 638 aa20.93■□□□□ 0.94
SS18L1-202ENST00000370848 RRS1Q15050 365 aaKnown RBP20.92■□□□□ 0.94
SS18L1-202ENST00000370848 LTV1Q96GA3 475 aaPredicted RBP20.92■□□□□ 0.94
SS18L1-202ENST00000370848 DDX54Q8TDD1 881 aaKnown RBP20.91■□□□□ 0.94
SS18L1-202ENST00000370848 SLC16A10Q8TF71 515 aa20.9■□□□□ 0.94
SS18L1-202ENST00000370848 PANK3Q9H999 370 aa20.9■□□□□ 0.94
SS18L1-202ENST00000370848 KAT6BQ8WYB5 2073 aa20.9■□□□□ 0.94
SS18L1-202ENST00000370848 ATF5Q9Y2D1 282 aaPredicted RBP20.89■□□□□ 0.93
SS18L1-202ENST00000370848 PRIM1P49642 420 aaKnown RBP20.88■□□□□ 0.93
SS18L1-202ENST00000370848 SYT17Q9BSW7 474 aa20.88■□□□□ 0.93
SS18L1-202ENST00000370848 PLEKHG2Q9H7P9 1386 aa20.87■□□□□ 0.93
SS18L1-202ENST00000370848 YY1P25490 414 aa20.87■□□□□ 0.93
SS18L1-202ENST00000370848 HSP90AB2PQ58FF8 381 aa20.87■□□□□ 0.93
SS18L1-202ENST00000370848 FHDC1Q9C0D6 1143 aaPredicted RBP20.87■□□□□ 0.93
SS18L1-202ENST00000370848 TOGARAM1Q9Y4F4 1720 aa20.87■□□□□ 0.93
SS18L1-202ENST00000370848 WASHC2AQ641Q2 1341 aa20.86■□□□□ 0.93
SS18L1-202ENST00000370848 PNPLA7Q6ZV29 1317 aa20.86■□□□□ 0.93
SS18L1-202ENST00000370848 PCDH11XQ9BZA7 1347 aa20.85■□□□□ 0.93
SS18L1-202ENST00000370848 PCDH11YQ9BZA8 1340 aa20.85■□□□□ 0.93
SS18L1-202ENST00000370848 DCAF8L1A6NGE4 600 aa20.85■□□□□ 0.93
SS18L1-202ENST00000370848 RAPGEF4Q8WZA2 1011 aa20.85■□□□□ 0.93
SS18L1-202ENST00000370848 C5P01031 1676 aa20.85■□□□□ 0.93
SS18L1-202ENST00000370848 TAF1LQ8IZX4 1826 aa20.84■□□□□ 0.93
SS18L1-202ENST00000370848 ARXQ96QS3 562 aa20.84■□□□□ 0.93
SS18L1-202ENST00000370848 TATP17735 454 aaPredicted RBP20.82■□□□□ 0.92
SS18L1-202ENST00000370848 MAP2P11137 1827 aaKnown RBP20.82■□□□□ 0.92
SS18L1-202ENST00000370848 ITGB4P16144 1822 aa20.82■□□□□ 0.92
SS18L1-202ENST00000370848 CHD4Q14839 1912 aa20.81■□□□□ 0.92
SS18L1-202ENST00000370848 USHBP1Q8N6Y0 703 aa20.81■□□□□ 0.92
SS18L1-202ENST00000370848 EMILIN1Q9Y6C2 1016 aa20.81■□□□□ 0.92
SS18L1-202ENST00000370848 GOLGB1Q14789 3259 aaKnown RBP20.8■□□□□ 0.92
SS18L1-202ENST00000370848 SYTL4Q96C24 671 aaPredicted RBP20.8■□□□□ 0.92
SS18L1-202ENST00000370848 CYP27B1O15528 508 aa20.79■□□□□ 0.92
SS18L1-202ENST00000370848 HMGB2P26583 209 aaKnown RBP20.79■□□□□ 0.92
SS18L1-202ENST00000370848 NKX1-1Q15270 411 aaPredicted RBP20.79■□□□□ 0.92
SS18L1-202ENST00000370848 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.78■□□□□ 0.92
SS18L1-202ENST00000370848 CCNL1Q9UK58 526 aaPredicted RBP20.78■□□□□ 0.92
SS18L1-202ENST00000370848 TNNT2P45379 298 aaPredicted RBP20.76■□□□□ 0.91
SS18L1-202ENST00000370848 TFCP2L1Q9NZI6 479 aa20.76■□□□□ 0.91
SS18L1-202ENST00000370848 PALLDQ8WX93 1383 aa20.75■□□□□ 0.91
SS18L1-202ENST00000370848 KCNQ4P56696 695 aa20.75■□□□□ 0.91
SS18L1-202ENST00000370848 KNSTRNQ9Y448 316 aa20.75■□□□□ 0.91
SS18L1-202ENST00000370848 C4BP0C0L5 1744 aa20.75■□□□□ 0.91
SS18L1-202ENST00000370848 POLKQ9UBT6 870 aa20.74■□□□□ 0.91
SS18L1-202ENST00000370848 POLD1P28340 1107 aa20.73■□□□□ 0.91
SS18L1-202ENST00000370848 AMER1Q5JTC6 1135 aaPredicted RBP20.73■□□□□ 0.91
SS18L1-202ENST00000370848 ZNF831Q5JPB2 1677 aa20.73■□□□□ 0.91
SS18L1-202ENST00000370848 UBR3Q6ZT12 1888 aa20.73■□□□□ 0.91
SS18L1-202ENST00000370848 PER1O15534 1290 aaPredicted RBP20.72■□□□□ 0.91
SS18L1-202ENST00000370848 EYA1Q99502 592 aa20.72■□□□□ 0.91
SS18L1-202ENST00000370848 COL23A1Q86Y22 540 aaPredicted RBP20.71■□□□□ 0.91
SS18L1-202ENST00000370848 PPM1GO15355 546 aaPredicted RBP20.7■□□□□ 0.9
SS18L1-202ENST00000370848 FLAD1Q8NFF5 587 aa20.7■□□□□ 0.9
SS18L1-202ENST00000370848 SMARCC1Q92922 1105 aaPredicted RBP20.7■□□□□ 0.9
SS18L1-202ENST00000370848 SPG7Q9UQ90 795 aa20.7■□□□□ 0.9
SS18L1-202ENST00000370848 MORC1Q86VD1 984 aa20.69■□□□□ 0.9
SS18L1-202ENST00000370848 IGSF1Q8N6C5 1336 aa20.69■□□□□ 0.9
SS18L1-202ENST00000370848 CNGB1Q14028 1251 aaPredicted RBP20.68■□□□□ 0.9
SS18L1-202ENST00000370848 CC2D1BQ5T0F9 858 aaKnown RBP20.67■□□□□ 0.9
SS18L1-202ENST00000370848 MPRIPQ6WCQ1 1025 aa20.67■□□□□ 0.9
SS18L1-202ENST00000370848 ZNF784Q8NCA9 323 aaPredicted RBP20.67■□□□□ 0.9
SS18L1-202ENST00000370848 PIGBQ92521 554 aa20.67■□□□□ 0.9
SS18L1-202ENST00000370848 EIF4A2Q14240 407 aaKnown RBP20.66■□□□□ 0.9
SS18L1-202ENST00000370848 PHKG2P15735 406 aa20.65■□□□□ 0.9
SS18L1-202ENST00000370848 ZEB1P37275 1124 aaPredicted RBP20.64■□□□□ 0.89
SS18L1-202ENST00000370848 IFNL2Q8IZJ0 200 aa20.64■□□□□ 0.89
SS18L1-202ENST00000370848 KDRP35968 1356 aa20.63■□□□□ 0.89
SS18L1-202ENST00000370848 NLGN2Q8NFZ4 835 aa20.63■□□□□ 0.89
SS18L1-202ENST00000370848 CICQ96RK0 1608 aaPredicted RBP20.63■□□□□ 0.89
SS18L1-202ENST00000370848 COL5A3P25940 1745 aaPredicted RBP20.61■□□□□ 0.89
SS18L1-202ENST00000370848 LOC102724428A0A0B4J2F2 783 aa20.61■□□□□ 0.89
SS18L1-202ENST00000370848 SSFA2P28290 1259 aa20.61■□□□□ 0.89
SS18L1-202ENST00000370848 SIK1P57059 783 aa20.61■□□□□ 0.89
SS18L1-202ENST00000370848 AMIGO3Q86WK7 504 aa20.61■□□□□ 0.89
SS18L1-202ENST00000370848 CD2APQ9Y5K6 639 aa20.61■□□□□ 0.89
SS18L1-202ENST00000370848 TMOD3Q9NYL9 352 aa20.59■□□□□ 0.89
SS18L1-202ENST00000370848 NPC1L1Q9UHC9 1359 aa20.59■□□□□ 0.89
SS18L1-202ENST00000370848 GPR162Q16538 588 aa20.58■□□□□ 0.89
SS18L1-202ENST00000370848 AK7Q96M32 723 aa20.58■□□□□ 0.89
SS18L1-202ENST00000370848 ERVV-2B6SEH9 535 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms