RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 TMEM2Q9UHN6 1383 aa5.28□□□□□ -1.56
MCF2-203ENST00000370576 RIMS2Q9UQ26 1411 aa5.28□□□□□ -1.56
MCF2-203ENST00000370576 MAP4K4O95819 1239 aaPredicted RBP5.28□□□□□ -1.56
MCF2-203ENST00000370576 TSR1Q2NL82 804 aaKnown RBP5.28□□□□□ -1.56
MCF2-203ENST00000370576 FBXO31Q5XUX0 539 aaPredicted RBP5.28□□□□□ -1.56
MCF2-203ENST00000370576 GPATCH11Q8N954 259 aa5.28□□□□□ -1.56
MCF2-203ENST00000370576 SPINK5Q9NQ38 1064 aaPredicted RBP5.28□□□□□ -1.56
MCF2-203ENST00000370576 NFAT5O94916 1531 aa5.28□□□□□ -1.56
MCF2-203ENST00000370576 DISP3Q9P2K9 1392 aa5.28□□□□□ -1.56
MCF2-203ENST00000370576 KDM3BQ7LBC6 1761 aa5.28□□□□□ -1.56
MCF2-203ENST00000370576 GLI3P10071 1580 aa5.27□□□□□ -1.57
MCF2-203ENST00000370576 CCDC194A0A1B0GVG4 234 aa5.27□□□□□ -1.57
MCF2-203ENST00000370576 C11orf95C9JLR9 678 aaPredicted RBP5.27□□□□□ -1.57
MCF2-203ENST00000370576 PARP9Q8IXQ6 854 aa5.27□□□□□ -1.57
MCF2-203ENST00000370576 BRINP2Q9C0B6 783 aa5.27□□□□□ -1.57
MCF2-203ENST00000370576 MYH16Q9H6N6 1097 aa5.27□□□□□ -1.57
MCF2-203ENST00000370576 KIF7Q2M1P5 1343 aa5.27□□□□□ -1.57
MCF2-203ENST00000370576 TUBGCP6Q96RT7 1819 aa5.27□□□□□ -1.57
MCF2-203ENST00000370576 RREB1Q92766 1687 aa5.27□□□□□ -1.57
MCF2-203ENST00000370576 ZNF526Q8TF50 670 aaPredicted RBP5.27□□□□□ -1.57
MCF2-203ENST00000370576 RBM27Q9P2N5 1060 aaKnown RBP5.27□□□□□ -1.57
MCF2-203ENST00000370576 PNPLA6Q8IY17 1366 aa5.26□□□□□ -1.57
MCF2-203ENST00000370576 CFAP70Q5T0N1 1121 aa5.26□□□□□ -1.57
MCF2-203ENST00000370576 RBM26Q5T8P6 1007 aaKnown RBP5.26□□□□□ -1.57
MCF2-203ENST00000370576 CCDC97Q96F63 343 aaPredicted RBP5.26□□□□□ -1.57
MCF2-203ENST00000370576 MTA3Q9BTC8 594 aa5.26□□□□□ -1.57
MCF2-203ENST00000370576 TMUB1Q9BVT8 246 aa5.26□□□□□ -1.57
MCF2-203ENST00000370576 RGS20O76081 388 aa5.26□□□□□ -1.57
MCF2-203ENST00000370576 MYBPC2Q14324 1141 aa5.26□□□□□ -1.57
MCF2-203ENST00000370576 PMM1Q92871 262 aa5.26□□□□□ -1.57
MCF2-203ENST00000370576 TBC1D2Q9BYX2 928 aa5.26□□□□□ -1.57
MCF2-203ENST00000370576 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.26□□□□□ -1.57
MCF2-203ENST00000370576 UBR2Q8IWV8 1755 aa5.26□□□□□ -1.57
MCF2-203ENST00000370576 NRAPQ86VF7 1730 aa5.26□□□□□ -1.57
MCF2-203ENST00000370576 TNRQ92752 1358 aa5.26□□□□□ -1.57
MCF2-203ENST00000370576 TSHZ1Q6ZSZ6 1077 aa5.26□□□□□ -1.57
MCF2-203ENST00000370576 TBX22Q9Y458 520 aa5.26□□□□□ -1.57
MCF2-203ENST00000370576 POLR3AO14802 1390 aaPredicted RBP5.25□□□□□ -1.57
MCF2-203ENST00000370576 EIF3AQ14152 1382 aaKnown RBP5.25□□□□□ -1.57
MCF2-203ENST00000370576 CAMK2BQ13554 666 aa5.25□□□□□ -1.57
MCF2-203ENST00000370576 RALBP1Q15311 655 aa5.25□□□□□ -1.57
MCF2-203ENST00000370576 C4orf46Q504U0 113 aa5.25□□□□□ -1.57
MCF2-203ENST00000370576 IPO4Q8TEX9 1081 aaKnown RBP5.25□□□□□ -1.57
MCF2-203ENST00000370576 STAG3Q9UJ98 1225 aa5.25□□□□□ -1.57
MCF2-203ENST00000370576 DMRT2Q9Y5R5 561 aa5.25□□□□□ -1.57
MCF2-203ENST00000370576 RNF123Q5XPI4 1314 aa5.25□□□□□ -1.57
MCF2-203ENST00000370576 EIF3JO75822 258 aaKnown RBP5.25□□□□□ -1.57
MCF2-203ENST00000370576 MAGEC2Q9UBF1 373 aaPredicted RBP5.25□□□□□ -1.57
MCF2-203ENST00000370576 ZC3H6P61129 1189 aaKnown RBP5.25□□□□□ -1.57
MCF2-203ENST00000370576 E2F4Q16254 413 aa5.25□□□□□ -1.57
MCF2-203ENST00000370576 NOP9Q86U38 636 aaKnown RBP5.25□□□□□ -1.57
MCF2-203ENST00000370576 CUEDC1Q9NWM3 386 aaPredicted RBP5.25□□□□□ -1.57
MCF2-203ENST00000370576 CHIC2Q9UKJ5 165 aa5.25□□□□□ -1.57
MCF2-203ENST00000370576 LTBP4Q8N2S1 1624 aa5.25□□□□□ -1.57
MCF2-203ENST00000370576 CARNS1A5YM72 827 aa5.24□□□□□ -1.57
MCF2-203ENST00000370576 HSPA5P11021 654 aaKnown RBP5.24□□□□□ -1.57
MCF2-203ENST00000370576 DPH6Q7L8W6 267 aa5.24□□□□□ -1.57
MCF2-203ENST00000370576 NLGN1Q8N2Q7 840 aa5.24□□□□□ -1.57
MCF2-203ENST00000370576 AHDC1Q5TGY3 1603 aaPredicted RBP5.24□□□□□ -1.57
MCF2-203ENST00000370576 TLDC2A0PJX2 215 aa5.24□□□□□ -1.57
MCF2-203ENST00000370576 RECKO95980 971 aa5.24□□□□□ -1.57
MCF2-203ENST00000370576 FAM69CQ0P6D2 419 aa5.24□□□□□ -1.57
MCF2-203ENST00000370576 MFSD10Q14728 455 aa5.24□□□□□ -1.57
MCF2-203ENST00000370576 SPACA7Q96KW9 195 aa5.24□□□□□ -1.57
MCF2-203ENST00000370576 SOCS7O14512 581 aa5.24□□□□□ -1.57
MCF2-203ENST00000370576 FOXD4L6Q3SYB3 417 aaPredicted RBP5.24□□□□□ -1.57
MCF2-203ENST00000370576 FOXD4L3Q6VB84 417 aaPredicted RBP5.24□□□□□ -1.57
MCF2-203ENST00000370576 RPUSD2Q8IZ73 545 aaKnown RBP5.24□□□□□ -1.57
MCF2-203ENST00000370576 METTL14Q9HCE5 456 aaKnown RBP5.24□□□□□ -1.57
MCF2-203ENST00000370576 CACNA1FO60840 1977 aa5.23□□□□□ -1.57
MCF2-203ENST00000370576 OVOS2A0A0J9YW53 1432 aa5.23□□□□□ -1.57
MCF2-203ENST00000370576 OVOS2Q6IE36 1432 aa5.23□□□□□ -1.57
MCF2-203ENST00000370576 NUBP1P53384 320 aa5.23□□□□□ -1.57
MCF2-203ENST00000370576 PHLDB3Q6NSJ2 640 aa5.23□□□□□ -1.57
MCF2-203ENST00000370576 USP31Q70CQ4 1352 aa5.23□□□□□ -1.57
MCF2-203ENST00000370576 RAPGEF3O95398 923 aa5.23□□□□□ -1.57
MCF2-203ENST00000370576 RYDENQ9NUL5 291 aaKnown RBP5.23□□□□□ -1.57
MCF2-203ENST00000370576 KLHL42Q9P2K6 505 aa5.23□□□□□ -1.57
MCF2-203ENST00000370576 NCKAP5LQ9HCH0 1330 aa5.23□□□□□ -1.57
MCF2-203ENST00000370576 PHLPP1O60346 1717 aa5.23□□□□□ -1.57
MCF2-203ENST00000370576 U2SURPO15042 1029 aaKnown RBP5.22□□□□□ -1.57
MCF2-203ENST00000370576 ADGRF5Q8IZF2 1346 aa5.22□□□□□ -1.57
MCF2-203ENST00000370576 ANKRD36BQ8N2N9 1353 aa5.22□□□□□ -1.57
MCF2-203ENST00000370576 MS4A1P11836 297 aa5.22□□□□□ -1.57
MCF2-203ENST00000370576 KCNB2Q92953 911 aa5.22□□□□□ -1.57
MCF2-203ENST00000370576 PBXIP1Q96AQ6 731 aa5.22□□□□□ -1.57
MCF2-203ENST00000370576 FAN1Q9Y2M0 1017 aa5.22□□□□□ -1.57
MCF2-203ENST00000370576 LAMB4A4D0S4 1761 aa5.22□□□□□ -1.57
MCF2-203ENST00000370576 AATKQ6ZMQ8 1374 aa5.22□□□□□ -1.57
MCF2-203ENST00000370576 VGFO15240 615 aaPredicted RBP5.22□□□□□ -1.57
MCF2-203ENST00000370576 GYS2P54840 703 aa5.22□□□□□ -1.57
MCF2-203ENST00000370576 SH3D19Q5HYK7 790 aa5.22□□□□□ -1.57
MCF2-203ENST00000370576 MKL1Q969V6 931 aa5.22□□□□□ -1.57
MCF2-203ENST00000370576 NAP1L2Q9ULW6 460 aaPredicted RBP5.22□□□□□ -1.57
MCF2-203ENST00000370576 U3KPZ7 1027 aaPredicted RBP5.22□□□□□ -1.57
MCF2-203ENST00000370576 LONRF3Q496Y0 759 aa5.21□□□□□ -1.57
MCF2-203ENST00000370576 SENP7Q9BQF6 1050 aa5.21□□□□□ -1.57
MCF2-203ENST00000370576 SCN11AQ9UI33 1791 aa5.21□□□□□ -1.57
MCF2-203ENST00000370576 NWD2Q9ULI1 1742 aa5.21□□□□□ -1.57
MCF2-203ENST00000370576 FOXD4Q12950 439 aaPredicted RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms