RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 PLEKHH2Q8IVE3 1493 aa5.26□□□□□ -1.57
MCF2-202ENST00000370573 SETD5Q9C0A6 1442 aa5.26□□□□□ -1.57
MCF2-202ENST00000370573 SKOR1P84550 965 aa5.26□□□□□ -1.57
MCF2-202ENST00000370573 CCDC82Q8N4S0 544 aa5.26□□□□□ -1.57
MCF2-202ENST00000370573 AFAP1Q8N556 730 aa5.26□□□□□ -1.57
MCF2-202ENST00000370573 KIF13AQ9H1H9 1805 aa5.26□□□□□ -1.57
MCF2-202ENST00000370573 ABCC1P33527 1531 aa5.26□□□□□ -1.57
MCF2-202ENST00000370573 SCAPERQ9BY12 1400 aa5.25□□□□□ -1.57
MCF2-202ENST00000370573 LILRB3O75022 631 aa5.25□□□□□ -1.57
MCF2-202ENST00000370573 PDIA4P13667 645 aaKnown RBP5.25□□□□□ -1.57
MCF2-202ENST00000370573 PTPRNQ16849 979 aa5.25□□□□□ -1.57
MCF2-202ENST00000370573 LINC01559Q495D7 138 aa5.25□□□□□ -1.57
MCF2-202ENST00000370573 PKDCCQ504Y2 493 aa5.25□□□□□ -1.57
MCF2-202ENST00000370573 DDRGK1Q96HY6 314 aa5.25□□□□□ -1.57
MCF2-202ENST00000370573 NAIPQ13075 1403 aa5.25□□□□□ -1.57
MCF2-202ENST00000370573 TSPY4P0CV99 314 aa5.25□□□□□ -1.57
MCF2-202ENST00000370573 TSPY10P0CW01 314 aa5.25□□□□□ -1.57
MCF2-202ENST00000370573 PRR20EP86478 221 aa5.25□□□□□ -1.57
MCF2-202ENST00000370573 PRR20CP86479 221 aa5.25□□□□□ -1.57
MCF2-202ENST00000370573 PRR20DP86480 221 aa5.25□□□□□ -1.57
MCF2-202ENST00000370573 PRR20BP86481 221 aa5.25□□□□□ -1.57
MCF2-202ENST00000370573 PRR20AP86496 221 aa5.25□□□□□ -1.57
MCF2-202ENST00000370573 PRPF38BQ5VTL8 546 aaKnown RBP5.25□□□□□ -1.57
MCF2-202ENST00000370573 MRGPRX2Q96LB1 330 aa5.25□□□□□ -1.57
MCF2-202ENST00000370573 UNC93B1Q9H1C4 597 aa5.25□□□□□ -1.57
MCF2-202ENST00000370573 EVA1BQ9NVM1 165 aa5.25□□□□□ -1.57
MCF2-202ENST00000370573 MAP10Q9P2G4 905 aa5.25□□□□□ -1.57
MCF2-202ENST00000370573 ROCK1Q13464 1354 aa5.25□□□□□ -1.57
MCF2-202ENST00000370573 RAB3GAP2Q9H2M9 1393 aa5.25□□□□□ -1.57
MCF2-202ENST00000370573 ADGRL1O94910 1474 aa5.25□□□□□ -1.57
MCF2-202ENST00000370573 CCDC141Q6ZP82 1450 aa5.25□□□□□ -1.57
MCF2-202ENST00000370573 PPRC1Q5VV67 1664 aaKnown RBP5.25□□□□□ -1.57
MCF2-202ENST00000370573 HFM1A2PYH4 1435 aa5.25□□□□□ -1.57
MCF2-202ENST00000370573 NCOA1Q15788 1441 aa5.25□□□□□ -1.57
MCF2-202ENST00000370573 C9orf84Q5VXU9 1444 aa5.25□□□□□ -1.57
MCF2-202ENST00000370573 CYP4X1Q8N118 509 aa5.24□□□□□ -1.57
MCF2-202ENST00000370573 CROCC2H7BZ55 1655 aa5.24□□□□□ -1.57
MCF2-202ENST00000370573 TSPOAP1O95153 1857 aa5.24□□□□□ -1.57
MCF2-202ENST00000370573 ADGRL2O95490 1459 aa5.24□□□□□ -1.57
MCF2-202ENST00000370573 NEO1Q92859 1461 aa5.24□□□□□ -1.57
MCF2-202ENST00000370573 SHANK2Q9UPX8 1470 aa5.24□□□□□ -1.57
MCF2-202ENST00000370573 TTC24A2A3L6 582 aaPredicted RBP5.24□□□□□ -1.57
MCF2-202ENST00000370573 RC3H1Q5TC82 1133 aaKnown RBP5.24□□□□□ -1.57
MCF2-202ENST00000370573 LYPD8Q6UX82 237 aa5.24□□□□□ -1.57
MCF2-202ENST00000370573 BAP1Q92560 729 aa5.24□□□□□ -1.57
MCF2-202ENST00000370573 KDM6BO15054 1643 aa5.24□□□□□ -1.57
MCF2-202ENST00000370573 KCNH2Q12809 1159 aa5.23□□□□□ -1.57
MCF2-202ENST00000370573 SKIV2LQ15477 1246 aaKnown RBP5.23□□□□□ -1.57
MCF2-202ENST00000370573 DESI1Q6ICB0 168 aa5.23□□□□□ -1.57
MCF2-202ENST00000370573 ANKRD30AQ9BXX3 1397 aa5.23□□□□□ -1.57
MCF2-202ENST00000370573 RAPGEF3O95398 923 aa5.23□□□□□ -1.57
MCF2-202ENST00000370573 CTDSPL2Q05D32 466 aa5.23□□□□□ -1.57
MCF2-202ENST00000370573 MAST1Q9Y2H9 1570 aa5.23□□□□□ -1.57
MCF2-202ENST00000370573 SPAG9O60271 1321 aaKnown RBP5.23□□□□□ -1.57
MCF2-202ENST00000370573 WNT7AO00755 349 aa5.22□□□□□ -1.57
MCF2-202ENST00000370573 SH3BP2P78314 561 aa5.22□□□□□ -1.57
MCF2-202ENST00000370573 SH3D19Q5HYK7 790 aa5.22□□□□□ -1.57
MCF2-202ENST00000370573 TOR4AQ9NXH8 423 aa5.22□□□□□ -1.57
MCF2-202ENST00000370573 ADGBQ8N7X0 1667 aa5.22□□□□□ -1.57
MCF2-202ENST00000370573 ZBTB7CA1YPR0 619 aa5.22□□□□□ -1.57
MCF2-202ENST00000370573 J3QL48 77 aa5.22□□□□□ -1.57
MCF2-202ENST00000370573 TRAK2O60296 914 aa5.22□□□□□ -1.57
MCF2-202ENST00000370573 CFAP74Q9C0B2 1584 aa5.22□□□□□ -1.57
MCF2-202ENST00000370573 CCDC9Q9Y3X0 531 aaKnown RBP5.22□□□□□ -1.57
MCF2-202ENST00000370573 GCC2Q8IWJ2 1684 aa5.22□□□□□ -1.57
MCF2-202ENST00000370573 RTEL1-TNFRSF6BF6WH68 1400 aa5.21□□□□□ -1.57
MCF2-202ENST00000370573 POGZQ7Z3K3 1410 aa5.21□□□□□ -1.57
MCF2-202ENST00000370573 ST8SIA5O15466 376 aa5.21□□□□□ -1.57
MCF2-202ENST00000370573 MYT1Q01538 1121 aa5.21□□□□□ -1.57
MCF2-202ENST00000370573 FLIIQ13045 1269 aa5.21□□□□□ -1.57
MCF2-202ENST00000370573 EHBP1Q8NDI1 1231 aa5.21□□□□□ -1.57
MCF2-202ENST00000370573 DENND4BO75064 1496 aaPredicted RBP5.21□□□□□ -1.57
MCF2-202ENST00000370573 COL17A1Q9UMD9 1497 aaPredicted RBP5.21□□□□□ -1.57
MCF2-202ENST00000370573 DHX57Q6P158 1386 aaKnown RBP5.21□□□□□ -1.58
MCF2-202ENST00000370573 KIF15Q9NS87 1388 aa5.21□□□□□ -1.58
MCF2-202ENST00000370573 TUSC1Q2TAM9 212 aa5.21□□□□□ -1.58
MCF2-202ENST00000370573 HELBQ8NG08 1087 aaPredicted RBP5.21□□□□□ -1.58
MCF2-202ENST00000370573 CCER1Q8TC90 406 aaPredicted RBP5.21□□□□□ -1.58
MCF2-202ENST00000370573 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.21□□□□□ -1.58
MCF2-202ENST00000370573 TEX14Q8IWB6 1497 aa5.21□□□□□ -1.58
MCF2-202ENST00000370573 ANKRD50Q9ULJ7 1429 aa5.21□□□□□ -1.58
MCF2-202ENST00000370573 ZNF518AQ6AHZ1 1483 aa5.2□□□□□ -1.58
MCF2-202ENST00000370573 WNT7BP56706 349 aa5.2□□□□□ -1.58
MCF2-202ENST00000370573 LRRN4Q8WUT4 740 aa5.2□□□□□ -1.58
MCF2-202ENST00000370573 ZFYVE16Q7Z3T8 1539 aa5.2□□□□□ -1.58
MCF2-202ENST00000370573 KDM5CP41229 1560 aa5.2□□□□□ -1.58
MCF2-202ENST00000370573 INO80Q9ULG1 1556 aaPredicted RBP5.2□□□□□ -1.58
MCF2-202ENST00000370573 KIDINS220Q9ULH0 1771 aa5.2□□□□□ -1.58
MCF2-202ENST00000370573 AP1G2O75843 785 aa5.2□□□□□ -1.58
MCF2-202ENST00000370573 DGAT1O75907 488 aa5.2□□□□□ -1.58
MCF2-202ENST00000370573 ALDH1A1P00352 501 aa5.2□□□□□ -1.58
MCF2-202ENST00000370573 F12P00748 615 aaPredicted RBP5.2□□□□□ -1.58
MCF2-202ENST00000370573 ZNF511Q8NB15 262 aa5.2□□□□□ -1.58
MCF2-202ENST00000370573 SNIP1Q8TAD8 396 aaKnown RBP5.2□□□□□ -1.58
MCF2-202ENST00000370573 PLXNC1O60486 1568 aa5.2□□□□□ -1.58
MCF2-202ENST00000370573 FRMPD1Q5SYB0 1578 aa5.2□□□□□ -1.58
MCF2-202ENST00000370573 RICTORQ6R327 1708 aa5.2□□□□□ -1.58
MCF2-202ENST00000370573 MLH3Q9UHC1 1453 aa5.2□□□□□ -1.58
MCF2-202ENST00000370573 ATP7AQ04656 1500 aa5.2□□□□□ -1.58
MCF2-202ENST00000370573 A6NJR5 290 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms