RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 STK32BQ9NY57 414 aa20.6■□□□□ 0.89
LMO4-201ENST00000370542 NHSQ6T4R5 1651 aa20.6■□□□□ 0.89
LMO4-201ENST00000370542 HOXC9P31274 260 aa20.59■□□□□ 0.89
LMO4-201ENST00000370542 CDCA8Q53HL2 280 aa20.58■□□□□ 0.89
LMO4-201ENST00000370542 TXNRD1Q16881 649 aa20.57■□□□□ 0.88
LMO4-201ENST00000370542 MIER1Q8N108 512 aa20.57■□□□□ 0.88
LMO4-201ENST00000370542 RTL1A6NKG5 1358 aa20.57■□□□□ 0.88
LMO4-201ENST00000370542 HSPA6P17066 643 aa20.56■□□□□ 0.88
LMO4-201ENST00000370542 FBLN1P23142 703 aa20.56■□□□□ 0.88
LMO4-201ENST00000370542 AMPHP49418 695 aa20.52■□□□□ 0.88
LMO4-201ENST00000370542 CARD14Q9BXL6 1004 aa20.52■□□□□ 0.88
LMO4-201ENST00000370542 GGNBP2Q9H3C7 697 aa20.52■□□□□ 0.88
LMO4-201ENST00000370542 KIF24Q5T7B8 1368 aa20.51■□□□□ 0.87
LMO4-201ENST00000370542 ACSBG1Q96GR2 724 aa20.51■□□□□ 0.87
LMO4-201ENST00000370542 PAPPAQ13219 1627 aa20.5■□□□□ 0.87
LMO4-201ENST00000370542 LTV1Q96GA3 475 aaPredicted RBP20.5■□□□□ 0.87
LMO4-201ENST00000370542 BTAF1O14981 1849 aa20.5■□□□□ 0.87
LMO4-201ENST00000370542 RRS1Q15050 365 aaKnown RBP20.49■□□□□ 0.87
LMO4-201ENST00000370542 RGPD2P0DJD1 1756 aa20.49■□□□□ 0.87
LMO4-201ENST00000370542 NBPF6Q5VWK0 638 aa20.48■□□□□ 0.87
LMO4-201ENST00000370542 NBPF4Q96M43 638 aa20.48■□□□□ 0.87
LMO4-201ENST00000370542 YTHDC1Q96MU7 727 aaKnown RBP20.48■□□□□ 0.87
LMO4-201ENST00000370542 KIF20BQ96Q89 1820 aa20.48■□□□□ 0.87
LMO4-201ENST00000370542 INSRP06213 1382 aa20.47■□□□□ 0.87
LMO4-201ENST00000370542 CGNL1Q0VF96 1302 aa20.47■□□□□ 0.87
LMO4-201ENST00000370542 MEGF6O75095 1541 aa20.47■□□□□ 0.87
LMO4-201ENST00000370542 KAT6BQ8WYB5 2073 aa20.46■□□□□ 0.87
LMO4-201ENST00000370542 ZCRB1Q8TBF4 217 aaKnown RBP20.45■□□□□ 0.86
LMO4-201ENST00000370542 DDX54Q8TDD1 881 aaKnown RBP20.45■□□□□ 0.86
LMO4-201ENST00000370542 LRRC4BQ9NT99 713 aa20.45■□□□□ 0.86
LMO4-201ENST00000370542 FLT4P35916 1363 aa20.45■□□□□ 0.86
LMO4-201ENST00000370542 HSP90AB2PQ58FF8 381 aa20.44■□□□□ 0.86
LMO4-201ENST00000370542 NSD3Q9BZ95 1437 aa20.44■□□□□ 0.86
LMO4-201ENST00000370542 ATP10DQ9P241 1426 aa20.44■□□□□ 0.86
LMO4-201ENST00000370542 NSD2O96028 1365 aa20.43■□□□□ 0.86
LMO4-201ENST00000370542 NCAPD2Q15021 1401 aa20.43■□□□□ 0.86
LMO4-201ENST00000370542 GRIN3BO60391 1043 aa20.42■□□□□ 0.86
LMO4-201ENST00000370542 SLC27A3Q5K4L6 730 aa20.42■□□□□ 0.86
LMO4-201ENST00000370542 SMG6Q86US8 1419 aaKnown RBP20.42■□□□□ 0.86
LMO4-201ENST00000370542 YBX3P16989 372 aaKnown RBP eCLIP20.41■□□□□ 0.865e-9■■■□□ 15.4
LMO4-201ENST00000370542 PRIM1P49642 420 aaKnown RBP20.4■□□□□ 0.86
LMO4-201ENST00000370542 NLGN2Q8NFZ4 835 aa20.4■□□□□ 0.86
LMO4-201ENST00000370542 AKT1S1Q96B36 256 aa20.4■□□□□ 0.86
LMO4-201ENST00000370542 GPBP1L1Q9HC44 474 aaPredicted RBP20.4■□□□□ 0.86
LMO4-201ENST00000370542 ANKRD26Q9UPS8 1709 aa20.4■□□□□ 0.86
LMO4-201ENST00000370542 ZNF827Q17R98 1081 aa20.39■□□□□ 0.85
LMO4-201ENST00000370542 LY75O60449 1722 aa20.39■□□□□ 0.85
LMO4-201ENST00000370542 USHBP1Q8N6Y0 703 aa20.38■□□□□ 0.85
LMO4-201ENST00000370542 SLC16A10Q8TF71 515 aa20.38■□□□□ 0.85
LMO4-201ENST00000370542 RAPGEF4Q8WZA2 1011 aa20.38■□□□□ 0.85
LMO4-201ENST00000370542 EMILIN1Q9Y6C2 1016 aa20.38■□□□□ 0.85
LMO4-201ENST00000370542 QSER1Q2KHR3 1735 aa20.38■□□□□ 0.85
LMO4-201ENST00000370542 DOT1LQ8TEK3 1739 aa20.38■□□□□ 0.85
LMO4-201ENST00000370542 WASHC2AQ641Q2 1341 aa20.37■□□□□ 0.85
LMO4-201ENST00000370542 DNAJC5GQ8N7S2 189 aa20.37■□□□□ 0.85
LMO4-201ENST00000370542 TATP17735 454 aaPredicted RBP20.36■□□□□ 0.85
LMO4-201ENST00000370542 KLHL34Q8N239 644 aa20.36■□□□□ 0.85
LMO4-201ENST00000370542 POLD1P28340 1107 aa20.35■□□□□ 0.85
LMO4-201ENST00000370542 EIF4G2P78344 907 aaKnown RBP eCLIP20.35■□□□□ 0.85
LMO4-201ENST00000370542 ADCY9O60503 1353 aa20.34■□□□□ 0.85
LMO4-201ENST00000370542 COL24A1Q17RW2 1714 aa20.34■□□□□ 0.85
LMO4-201ENST00000370542 PCDH11XQ9BZA7 1347 aa20.33■□□□□ 0.85
LMO4-201ENST00000370542 PCDH11YQ9BZA8 1340 aa20.33■□□□□ 0.85
LMO4-201ENST00000370542 MAP2P11137 1827 aaKnown RBP20.33■□□□□ 0.85
LMO4-201ENST00000370542 POLKQ9UBT6 870 aa20.33■□□□□ 0.85
LMO4-201ENST00000370542 CYP27B1O15528 508 aa20.32■□□□□ 0.84
LMO4-201ENST00000370542 HSPA5P11021 654 aaKnown RBP20.32■□□□□ 0.84
LMO4-201ENST00000370542 SYTL4Q96C24 671 aaPredicted RBP20.32■□□□□ 0.84
LMO4-201ENST00000370542 PKD1L3Q7Z443 1732 aa20.32■□□□□ 0.84
LMO4-201ENST00000370542 NKX1-1Q15270 411 aaPredicted RBP20.31■□□□□ 0.84
LMO4-201ENST00000370542 COL13A1Q5TAT6 717 aaPredicted RBP20.31■□□□□ 0.84
LMO4-201ENST00000370542 PNPLA7Q6ZV29 1317 aa20.3■□□□□ 0.84
LMO4-201ENST00000370542 APLP1P51693 650 aa20.3■□□□□ 0.84
LMO4-201ENST00000370542 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.3■□□□□ 0.84
LMO4-201ENST00000370542 SUPT16HQ9Y5B9 1047 aaKnown RBP20.3■□□□□ 0.84
LMO4-201ENST00000370542 PLEKHG2Q9H7P9 1386 aa20.3■□□□□ 0.84
LMO4-201ENST00000370542 EYA1Q99502 592 aa20.29■□□□□ 0.84
LMO4-201ENST00000370542 TUBGCP6Q96RT7 1819 aa20.28■□□□□ 0.84
LMO4-201ENST00000370542 PRELPP51888 382 aa20.28■□□□□ 0.84
LMO4-201ENST00000370542 KCNQ4P56696 695 aa20.28■□□□□ 0.84
LMO4-201ENST00000370542 KIF3CO14782 793 aa20.27■□□□□ 0.84
LMO4-201ENST00000370542 ZNF526Q8TF50 670 aaPredicted RBP20.27■□□□□ 0.84
LMO4-201ENST00000370542 CCNL1Q9UK58 526 aaPredicted RBP20.27■□□□□ 0.84
LMO4-201ENST00000370542 CAPN15O75808 1086 aa20.26■□□□□ 0.83
LMO4-201ENST00000370542 PANK3Q9H999 370 aa20.26■□□□□ 0.83
LMO4-201ENST00000370542 TOGARAM1Q9Y4F4 1720 aa20.26■□□□□ 0.83
LMO4-201ENST00000370542 PPM1GO15355 546 aaPredicted RBP20.25■□□□□ 0.83
LMO4-201ENST00000370542 HMGB2P26583 209 aaKnown RBP20.25■□□□□ 0.83
LMO4-201ENST00000370542 ANP32EQ9BTT0 268 aa20.25■□□□□ 0.83
LMO4-201ENST00000370542 TFCP2L1Q9NZI6 479 aa20.25■□□□□ 0.83
LMO4-201ENST00000370542 EIF4A2Q14240 407 aaKnown RBP20.24■□□□□ 0.83
LMO4-201ENST00000370542 ITGB4P16144 1822 aa20.24■□□□□ 0.83
LMO4-201ENST00000370542 SPG7Q9UQ90 795 aa20.23■□□□□ 0.83
LMO4-201ENST00000370542 PALLDQ8WX93 1383 aa20.21■□□□□ 0.83
LMO4-201ENST00000370542 TAF1LQ8IZX4 1826 aa20.21■□□□□ 0.83
LMO4-201ENST00000370542 MPRIPQ6WCQ1 1025 aa20.21■□□□□ 0.83
LMO4-201ENST00000370542 PIGBQ92521 554 aa20.21■□□□□ 0.83
LMO4-201ENST00000370542 SMARCC1Q92922 1105 aaPredicted RBP20.21■□□□□ 0.83
LMO4-201ENST00000370542 POLR3GLQ9BT43 218 aa20.21■□□□□ 0.83
LMO4-201ENST00000370542 IGSF1Q8N6C5 1336 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms