RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 CAVIN4Q5BKX8 364 aa10.1□□□□□ -0.79
ABCA4-201ENST00000370225 PDCP20941 246 aa10.1□□□□□ -0.79
ABCA4-201ENST00000370225 ARGLU1Q9NWB6 273 aaPredicted RBP10.1□□□□□ -0.79
ABCA4-201ENST00000370225 EXOC6BQ9Y2D4 811 aa10.1□□□□□ -0.79
ABCA4-201ENST00000370225 HECW1Q76N89 1606 aa10.1□□□□□ -0.79
ABCA4-201ENST00000370225 DHX8Q14562 1220 aaKnown RBP10.1□□□□□ -0.79
ABCA4-201ENST00000370225 HSP90B2PQ58FF3 399 aa10.1□□□□□ -0.79
ABCA4-201ENST00000370225 LARP1BQ659C4 914 aaKnown RBP10.1□□□□□ -0.79
ABCA4-201ENST00000370225 ERICH3Q5RHP9 1530 aa10.1□□□□□ -0.79
ABCA4-201ENST00000370225 AKNAQ7Z591 1439 aa10.1□□□□□ -0.79
ABCA4-201ENST00000370225 PPM1FP49593 454 aaPredicted RBP10.1□□□□□ -0.79
ABCA4-201ENST00000370225 DZIP1Q86YF9 867 aaKnown RBP10.1□□□□□ -0.79
ABCA4-201ENST00000370225 MKNK2Q9HBH9 465 aa10.1□□□□□ -0.79
ABCA4-201ENST00000370225 NOL7Q9UMY1 257 aaKnown RBP10.1□□□□□ -0.79
ABCA4-201ENST00000370225 SSR1P43307 286 aaKnown RBP10.09□□□□□ -0.79
ABCA4-201ENST00000370225 NFKBIBQ15653 356 aa10.09□□□□□ -0.79
ABCA4-201ENST00000370225 STIM1Q13586 685 aa10.09□□□□□ -0.79
ABCA4-201ENST00000370225 IFT140Q96RY7 1462 aa10.09□□□□□ -0.79
ABCA4-201ENST00000370225 NOM1Q5C9Z4 860 aaKnown RBP10.09□□□□□ -0.79
ABCA4-201ENST00000370225 ATF7IPQ6VMQ6 1270 aa10.09□□□□□ -0.79
ABCA4-201ENST00000370225 DHX37Q8IY37 1157 aaKnown RBP10.09□□□□□ -0.79
ABCA4-201ENST00000370225 ZNHIT6Q9NWK9 470 aaKnown RBP10.09□□□□□ -0.79
ABCA4-201ENST00000370225 KIAA1107Q9UPP5 1409 aa10.09□□□□□ -0.79
ABCA4-201ENST00000370225 CDK13Q14004 1512 aaKnown RBP10.09□□□□□ -0.79
ABCA4-201ENST00000370225 CCDC82Q8N4S0 544 aa10.09□□□□□ -0.79
ABCA4-201ENST00000370225 TNMDQ9H2S6 317 aa10.09□□□□□ -0.79
ABCA4-201ENST00000370225 NEBLO76041 1014 aa10.09□□□□□ -0.79
ABCA4-201ENST00000370225 DUSP27Q5VZP5 1158 aa10.09□□□□□ -0.79
ABCA4-201ENST00000370225 NME9Q86XW9 330 aa10.09□□□□□ -0.79
ABCA4-201ENST00000370225 SPDYE4A6NLX3 237 aa10.09□□□□□ -0.79
ABCA4-201ENST00000370225 TRAK2O60296 914 aa10.09□□□□□ -0.79
ABCA4-201ENST00000370225 RABEP1Q15276 862 aa10.09□□□□□ -0.79
ABCA4-201ENST00000370225 FBXO31Q5XUX0 539 aaPredicted RBP10.09□□□□□ -0.79
ABCA4-201ENST00000370225 BLOC1S2Q6QNY1 142 aa10.09□□□□□ -0.79
ABCA4-201ENST00000370225 CHD1LQ86WJ1 897 aa10.09□□□□□ -0.79
ABCA4-201ENST00000370225 KCNH5Q8NCM2 988 aa10.09□□□□□ -0.79
ABCA4-201ENST00000370225 TRMT112Q9UI30 125 aaKnown RBP10.09□□□□□ -0.79
ABCA4-201ENST00000370225 MYO6Q9UM54 1294 aa10.09□□□□□ -0.79
ABCA4-201ENST00000370225 EHBP1L1Q8N3D4 1523 aa10.08□□□□□ -0.8
ABCA4-201ENST00000370225 LIG1P18858 919 aa10.08□□□□□ -0.8
ABCA4-201ENST00000370225 ANKRD1Q15327 319 aa10.08□□□□□ -0.8
ABCA4-201ENST00000370225 CCDC39Q9UFE4 941 aa10.08□□□□□ -0.8
ABCA4-201ENST00000370225 ECM2O94769 699 aaPredicted RBP10.08□□□□□ -0.8
ABCA4-201ENST00000370225 JMYQ8N9B5 988 aa10.08□□□□□ -0.8
ABCA4-201ENST00000370225 ACBD3Q9H3P7 528 aa10.08□□□□□ -0.8
ABCA4-201ENST00000370225 CASTP20810 708 aaKnown RBP10.08□□□□□ -0.8
ABCA4-201ENST00000370225 CCDC96Q2M329 555 aa10.08□□□□□ -0.8
ABCA4-201ENST00000370225 BOLA2Q9H3K6 86 aa10.08□□□□□ -0.8
ABCA4-201ENST00000370225 FAM43AQ8N2R8 423 aa10.08□□□□□ -0.8
ABCA4-201ENST00000370225 ZNF622Q969S3 477 aaKnown RBP eCLIP10.08□□□□□ -0.8
ABCA4-201ENST00000370225 SEC63Q9UGP8 760 aaKnown RBP10.08□□□□□ -0.8
ABCA4-201ENST00000370225 PPFIBP1Q86W92 1011 aa10.08□□□□□ -0.8
ABCA4-201ENST00000370225 PLEKHH2Q8IVE3 1493 aa10.08□□□□□ -0.8
ABCA4-201ENST00000370225 LETM1O95202 739 aaPredicted RBP10.07□□□□□ -0.8
ABCA4-201ENST00000370225 PRKCSHP14314 528 aaPredicted RBP10.07□□□□□ -0.8
ABCA4-201ENST00000370225 IMMTQ16891 758 aaKnown RBP10.07□□□□□ -0.8
ABCA4-201ENST00000370225 MVPQ14764 893 aaKnown RBP10.07□□□□□ -0.8
ABCA4-201ENST00000370225 SUPT6HQ7KZ85 1726 aaKnown RBP10.07□□□□□ -0.8
ABCA4-201ENST00000370225 C6orf229H3BNL8 230 aa10.07□□□□□ -0.8
ABCA4-201ENST00000370225 SYNJ1O43426 1573 aa10.07□□□□□ -0.8
ABCA4-201ENST00000370225 ARHGEF11O15085 1522 aa10.07□□□□□ -0.8
ABCA4-201ENST00000370225 ARAP1Q96P48 1450 aa10.07□□□□□ -0.8
ABCA4-201ENST00000370225 AAMPQ13685 434 aa10.07□□□□□ -0.8
ABCA4-201ENST00000370225 AMOTL2Q9Y2J4 779 aa10.07□□□□□ -0.8
ABCA4-201ENST00000370225 ZBTB3Q9H5J0 574 aa10.07□□□□□ -0.8
ABCA4-201ENST00000370225 HFM1A2PYH4 1435 aa10.07□□□□□ -0.8
ABCA4-201ENST00000370225 RANBP6O60518 1105 aaKnown RBP10.06□□□□□ -0.8
ABCA4-201ENST00000370225 NFE2L2Q16236 605 aa10.06□□□□□ -0.8
ABCA4-201ENST00000370225 JARID2Q92833 1246 aaPredicted RBP10.06□□□□□ -0.8
ABCA4-201ENST00000370225 CCDC97Q96F63 343 aaPredicted RBP10.06□□□□□ -0.8
ABCA4-201ENST00000370225 EPRSP07814 1512 aaKnown RBP10.06□□□□□ -0.8
ABCA4-201ENST00000370225 F6X3S4 739 aa10.06□□□□□ -0.8
ABCA4-201ENST00000370225 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.06□□□□□ -0.8
ABCA4-201ENST00000370225 TMEM57Q8N5G2 664 aa10.06□□□□□ -0.8
ABCA4-201ENST00000370225 UBA5Q9GZZ9 404 aa10.06□□□□□ -0.8
ABCA4-201ENST00000370225 BMP2KQ9NSY1 1161 aaPredicted RBP10.06□□□□□ -0.8
ABCA4-201ENST00000370225 RSPH6AQ9H0K4 717 aa10.06□□□□□ -0.8
ABCA4-201ENST00000370225 CCDC61Q9Y6R9 512 aa10.06□□□□□ -0.8
ABCA4-201ENST00000370225 CDKL5O76039 1030 aa10.06□□□□□ -0.8
ABCA4-201ENST00000370225 MCM2P49736 904 aa10.06□□□□□ -0.8
ABCA4-201ENST00000370225 CCDC181Q5TID7 509 aa10.06□□□□□ -0.8
ABCA4-201ENST00000370225 CEP57L1Q8IYX8 460 aa10.06□□□□□ -0.8
ABCA4-201ENST00000370225 SPATA32Q96LK8 384 aa10.06□□□□□ -0.8
ABCA4-201ENST00000370225 CENPHQ9H3R5 247 aa10.06□□□□□ -0.8
ABCA4-201ENST00000370225 CHRNA2Q15822 529 aa10.06□□□□□ -0.8
ABCA4-201ENST00000370225 ACSBG1Q96GR2 724 aa10.06□□□□□ -0.8
ABCA4-201ENST00000370225 CTNNA3Q9UI47 895 aa10.06□□□□□ -0.8
ABCA4-201ENST00000370225 EXOC5O00471 708 aa10.06□□□□□ -0.8
ABCA4-201ENST00000370225 MAP7D2Q96T17 732 aa10.06□□□□□ -0.8
ABCA4-201ENST00000370225 CCDC8Q9H0W5 538 aaPredicted RBP10.06□□□□□ -0.8
ABCA4-201ENST00000370225 TMPOP42166 694 aaKnown RBP10.05□□□□□ -0.8
ABCA4-201ENST00000370225 SEPT7Q16181 437 aaKnown RBP10.05□□□□□ -0.8
ABCA4-201ENST00000370225 ATAD2Q6PL18 1390 aa10.05□□□□□ -0.8
ABCA4-201ENST00000370225 IFIT1P09914 478 aaKnown RBP10.05□□□□□ -0.8
ABCA4-201ENST00000370225 AEBP1Q8IUX7 1158 aa10.05□□□□□ -0.8
ABCA4-201ENST00000370225 WDR63Q8IWG1 891 aa10.05□□□□□ -0.8
ABCA4-201ENST00000370225 PIP4K2AP48426 406 aaPredicted RBP10.05□□□□□ -0.8
ABCA4-201ENST00000370225 IFIT5Q13325 482 aaKnown RBP10.05□□□□□ -0.8
ABCA4-201ENST00000370225 AXDND1Q5T1B0 1012 aaPredicted RBP10.05□□□□□ -0.8
ABCA4-201ENST00000370225 DAPK1P53355 1430 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms