RNA–Protein interactions for RNA: ENST00000370086.7

SSR4-203, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR4, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-203ENST00000370086 DDX54Q8TDD1 881 aaKnown RBP19.84■□□□□ 0.77
SSR4-203ENST00000370086 ACSBG1Q96GR2 724 aa19.84■□□□□ 0.77
SSR4-203ENST00000370086 PLSCR1O15162 318 aa19.83■□□□□ 0.77
SSR4-203ENST00000370086 AMER1Q5JTC6 1135 aaPredicted RBP19.83■□□□□ 0.77
SSR4-203ENST00000370086 ZCRB1Q8TBF4 217 aaKnown RBP19.83■□□□□ 0.77
SSR4-203ENST00000370086 DOT1LQ8TEK3 1739 aa19.82■□□□□ 0.76
SSR4-203ENST00000370086 PER1O15534 1290 aaPredicted RBP19.82■□□□□ 0.76
SSR4-203ENST00000370086 MORC1Q86VD1 984 aa19.82■□□□□ 0.76
SSR4-203ENST00000370086 NCAPD2Q15021 1401 aa19.82■□□□□ 0.76
SSR4-203ENST00000370086 RAPGEF4Q8WZA2 1011 aa19.81■□□□□ 0.76
SSR4-203ENST00000370086 PKD1L3Q7Z443 1732 aa19.8■□□□□ 0.76
SSR4-203ENST00000370086 R3HDM1Q15032 1099 aaKnown RBP19.8■□□□□ 0.76
SSR4-203ENST00000370086 EYA1Q99502 592 aa19.8■□□□□ 0.76
SSR4-203ENST00000370086 SRCAPQ6ZRS2 3230 aa19.79■□□□□ 0.76
SSR4-203ENST00000370086 TATP17735 454 aaPredicted RBP19.79■□□□□ 0.76
SSR4-203ENST00000370086 EIF4A2Q14240 407 aaKnown RBP19.79■□□□□ 0.76
SSR4-203ENST00000370086 PROM2Q8N271 834 aa19.79■□□□□ 0.76
SSR4-203ENST00000370086 PRIM1P49642 420 aaKnown RBP19.74■□□□□ 0.75
SSR4-203ENST00000370086 CC2D1BQ5T0F9 858 aaKnown RBP19.74■□□□□ 0.75
SSR4-203ENST00000370086 NBPF14Q5TI25 921 aa19.74■□□□□ 0.75
SSR4-203ENST00000370086 LRP5O75197 1615 aa19.73■□□□□ 0.75
SSR4-203ENST00000370086 TXNRD1Q16881 649 aa19.73■□□□□ 0.75
SSR4-203ENST00000370086 TOGARAM1Q9Y4F4 1720 aa19.73■□□□□ 0.75
SSR4-203ENST00000370086 PCDH11XQ9BZA7 1347 aa19.73■□□□□ 0.75
SSR4-203ENST00000370086 PCDH11YQ9BZA8 1340 aa19.73■□□□□ 0.75
SSR4-203ENST00000370086 ITGB4P16144 1822 aa19.72■□□□□ 0.75
SSR4-203ENST00000370086 CYP27B1O15528 508 aa19.72■□□□□ 0.75
SSR4-203ENST00000370086 IGSF1Q8N6C5 1336 aa19.72■□□□□ 0.75
SSR4-203ENST00000370086 LY75O60449 1722 aa19.71■□□□□ 0.75
SSR4-203ENST00000370086 SYTL4Q96C24 671 aaPredicted RBP19.71■□□□□ 0.75
SSR4-203ENST00000370086 ANO8Q9HCE9 1232 aaPredicted RBP19.71■□□□□ 0.75
SSR4-203ENST00000370086 NPC1L1Q9UHC9 1359 aa19.7■□□□□ 0.74
SSR4-203ENST00000370086 MTHFSP49914 203 aa19.69■□□□□ 0.74
SSR4-203ENST00000370086 CNGB1Q14028 1251 aaPredicted RBP19.69■□□□□ 0.74
SSR4-203ENST00000370086 PAPPAQ13219 1627 aa19.69■□□□□ 0.74
SSR4-203ENST00000370086 SPG7Q9UQ90 795 aa19.68■□□□□ 0.74
SSR4-203ENST00000370086 IL13P35225 146 aa19.67■□□□□ 0.74
SSR4-203ENST00000370086 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.67■□□□□ 0.74
SSR4-203ENST00000370086 CASZ1Q86V15 1759 aa19.67■□□□□ 0.74
SSR4-203ENST00000370086 LRRC4BQ9NT99 713 aa19.66■□□□□ 0.74
SSR4-203ENST00000370086 NKX1-1Q15270 411 aaPredicted RBP19.65■□□□□ 0.74
SSR4-203ENST00000370086 AEBP1Q8IUX7 1158 aa19.65■□□□□ 0.74
SSR4-203ENST00000370086 PLEKHG2Q9H7P9 1386 aa19.63■□□□□ 0.73
SSR4-203ENST00000370086 PHKG2P15735 406 aa19.63■□□□□ 0.73
SSR4-203ENST00000370086 SLC15A2Q16348 729 aa19.62■□□□□ 0.73
SSR4-203ENST00000370086 SULT6B1Q6IMI4 303 aa19.62■□□□□ 0.73
SSR4-203ENST00000370086 IFNL2Q8IZJ0 200 aa19.62■□□□□ 0.73
SSR4-203ENST00000370086 PDGFDQ9GZP0 370 aaPredicted RBP19.62■□□□□ 0.73
SSR4-203ENST00000370086 STK32BQ9NY57 414 aa19.62■□□□□ 0.73
SSR4-203ENST00000370086 KDRP35968 1356 aa19.61■□□□□ 0.73
SSR4-203ENST00000370086 TUBGCP6Q96RT7 1819 aa19.61■□□□□ 0.73
SSR4-203ENST00000370086 KCNQ4P56696 695 aa19.61■□□□□ 0.73
SSR4-203ENST00000370086 SLC27A3Q5K4L6 730 aa19.61■□□□□ 0.73
SSR4-203ENST00000370086 MPRIPQ6WCQ1 1025 aa19.61■□□□□ 0.73
SSR4-203ENST00000370086 COL3A1P02461 1466 aaPredicted RBP19.6■□□□□ 0.73
SSR4-203ENST00000370086 QSER1Q2KHR3 1735 aa19.59■□□□□ 0.73
SSR4-203ENST00000370086 ZNF827Q17R98 1081 aa19.59■□□□□ 0.73
SSR4-203ENST00000370086 PLEKHO1Q53GL0 409 aaPredicted RBP19.59■□□□□ 0.73
SSR4-203ENST00000370086 TAF1LQ8IZX4 1826 aa19.59■□□□□ 0.73
SSR4-203ENST00000370086 DIAPH1O60610 1272 aaKnown RBP19.58■□□□□ 0.72
SSR4-203ENST00000370086 PIGBQ92521 554 aa19.58■□□□□ 0.72
SSR4-203ENST00000370086 C5P01031 1676 aa19.58■□□□□ 0.72
SSR4-203ENST00000370086 VIRMAQ69YN4 1812 aaKnown RBP19.58■□□□□ 0.72
SSR4-203ENST00000370086 AMOTQ4VCS5 1084 aa19.57■□□□□ 0.72
SSR4-203ENST00000370086 AKT1S1Q96B36 256 aa19.57■□□□□ 0.72
SSR4-203ENST00000370086 HMOX1P09601 288 aa19.56■□□□□ 0.72
SSR4-203ENST00000370086 CCNL1Q9UK58 526 aaPredicted RBP19.56■□□□□ 0.72
SSR4-203ENST00000370086 PALLDQ8WX93 1383 aa19.56■□□□□ 0.72
SSR4-203ENST00000370086 ZNF530Q6P9A1 599 aaPredicted RBP19.55■□□□□ 0.72
SSR4-203ENST00000370086 SPON1Q9HCB6 807 aa19.55■□□□□ 0.72
SSR4-203ENST00000370086 SCN11AQ9UI33 1791 aa19.55■□□□□ 0.72
SSR4-203ENST00000370086 KDM6AO15550 1401 aaPredicted RBP19.53■□□□□ 0.72
SSR4-203ENST00000370086 ZBTB7AO95365 584 aa19.53■□□□□ 0.72
SSR4-203ENST00000370086 TMOD3Q9NYL9 352 aa19.53■□□□□ 0.72
SSR4-203ENST00000370086 HSP90AB1P08238 724 aaKnown RBP19.52■□□□□ 0.72
SSR4-203ENST00000370086 PPP2R1AP30153 589 aa19.52■□□□□ 0.72
SSR4-203ENST00000370086 SMARCC1Q92922 1105 aaPredicted RBP19.52■□□□□ 0.72
SSR4-203ENST00000370086 DCAF5Q96JK2 942 aa19.52■□□□□ 0.72
SSR4-203ENST00000370086 ASAP1Q9ULH1 1129 aa19.52■□□□□ 0.72
SSR4-203ENST00000370086 C1orf141Q5JVX7 400 aa19.51■□□□□ 0.71
SSR4-203ENST00000370086 ERVV-2B6SEH9 535 aa19.5■□□□□ 0.71
SSR4-203ENST00000370086 U2SURPO15042 1029 aaKnown RBP19.5■□□□□ 0.71
SSR4-203ENST00000370086 ATF5Q9Y2D1 282 aaPredicted RBP19.5■□□□□ 0.71
SSR4-203ENST00000370086 PNPLA7Q6ZV29 1317 aa19.5■□□□□ 0.71
SSR4-203ENST00000370086 C4BP0C0L5 1744 aa19.49■□□□□ 0.71
SSR4-203ENST00000370086 ATG3Q9NT62 314 aa19.49■□□□□ 0.71
SSR4-203ENST00000370086 PTGER2P43116 358 aa19.48■□□□□ 0.71
SSR4-203ENST00000370086 TFCP2L1Q9NZI6 479 aa19.48■□□□□ 0.71
SSR4-203ENST00000370086 COL24A1Q17RW2 1714 aa19.48■□□□□ 0.71
SSR4-203ENST00000370086 MTHFSDQ2M296 383 aaKnown RBP19.47■□□□□ 0.71
SSR4-203ENST00000370086 AKAP4Q5JQC9 854 aa19.47■□□□□ 0.71
SSR4-203ENST00000370086 CFAP53Q96M91 514 aa19.47■□□□□ 0.71
SSR4-203ENST00000370086 MTFR1LQ9H019 292 aa19.47■□□□□ 0.71
SSR4-203ENST00000370086 ADAMTS7Q9UKP4 1686 aa19.46■□□□□ 0.71
SSR4-203ENST00000370086 UBR3Q6ZT12 1888 aa19.46■□□□□ 0.71
SSR4-203ENST00000370086 LOC102724428A0A0B4J2F2 783 aa19.46■□□□□ 0.71
SSR4-203ENST00000370086 SIK1P57059 783 aa19.46■□□□□ 0.71
SSR4-203ENST00000370086 CABP4P57796 275 aa19.46■□□□□ 0.71
SSR4-203ENST00000370086 ZNF831Q5JPB2 1677 aa19.46■□□□□ 0.71
SSR4-203ENST00000370086 DDX10Q13206 875 aaKnown RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms