RNA–Protein interactions for RNA: ENST00000369957.5

MECP2-202, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-202ENST00000369957 RGPD2P0DJD1 1756 aa12.97□□□□□ -0.33
MECP2-202ENST00000369957 DOT1LQ8TEK3 1739 aa12.97□□□□□ -0.33
MECP2-202ENST00000369957 SLC27A3Q5K4L6 730 aa12.97□□□□□ -0.33
MECP2-202ENST00000369957 HDGFL2Q7Z4V5 671 aaPredicted RBP12.97□□□□□ -0.33
MECP2-202ENST00000369957 SLC16A10Q8TF71 515 aa12.97□□□□□ -0.33
MECP2-202ENST00000369957 LY75O60449 1722 aa12.96□□□□□ -0.33
MECP2-202ENST00000369957 MAP3K19Q56UN5 1328 aa12.96□□□□□ -0.33
MECP2-202ENST00000369957 SYTL4Q96C24 671 aaPredicted RBP12.96□□□□□ -0.33
MECP2-202ENST00000369957 TFCP2L1Q9NZI6 479 aa12.96□□□□□ -0.33
MECP2-202ENST00000369957 ANKRD36BQ8N2N9 1353 aa12.95□□□□□ -0.34
MECP2-202ENST00000369957 MEGF6O75095 1541 aa12.95□□□□□ -0.34
MECP2-202ENST00000369957 YBX3P16989 372 aaKnown RBP eCLIP12.95□□□□□ -0.34
MECP2-202ENST00000369957 HOXC9P31274 260 aa12.95□□□□□ -0.34
MECP2-202ENST00000369957 PELP1Q8IZL8 1130 aaKnown RBP12.95□□□□□ -0.34
MECP2-202ENST00000369957 POLD1P28340 1107 aa12.94□□□□□ -0.34
MECP2-202ENST00000369957 TERF2IPQ9NYB0 399 aa12.94□□□□□ -0.34
MECP2-202ENST00000369957 COL23A1Q86Y22 540 aaPredicted RBP12.93□□□□□ -0.34
MECP2-202ENST00000369957 GOLGB1Q14789 3259 aaKnown RBP12.93□□□□□ -0.34
MECP2-202ENST00000369957 ZCRB1Q8TBF4 217 aaKnown RBP12.92□□□□□ -0.34
MECP2-202ENST00000369957 TESK2Q96S53 571 aa12.92□□□□□ -0.34
MECP2-202ENST00000369957 CCNL1Q9UK58 526 aaPredicted RBP12.92□□□□□ -0.34
MECP2-202ENST00000369957 SLC24A1O60721 1099 aa12.91□□□□□ -0.34
MECP2-202ENST00000369957 GIGYF1O75420 1035 aaPredicted RBP12.91□□□□□ -0.34
MECP2-202ENST00000369957 NBPF6Q5VWK0 638 aa12.91□□□□□ -0.34
MECP2-202ENST00000369957 MSL1Q68DK7 614 aa12.91□□□□□ -0.34
MECP2-202ENST00000369957 USHBP1Q8N6Y0 703 aa12.91□□□□□ -0.34
MECP2-202ENST00000369957 NBPF4Q96M43 638 aa12.91□□□□□ -0.34
MECP2-202ENST00000369957 PUS7Q96PZ0 661 aaKnown RBP12.91□□□□□ -0.34
MECP2-202ENST00000369957 AMPHP49418 695 aa12.9□□□□□ -0.34
MECP2-202ENST00000369957 COG3Q96JB2 828 aa12.9□□□□□ -0.34
MECP2-202ENST00000369957 MSH5O43196 834 aa12.89□□□□□ -0.35
MECP2-202ENST00000369957 ZEB1P37275 1124 aaPredicted RBP12.89□□□□□ -0.35
MECP2-202ENST00000369957 RRS1Q15050 365 aaKnown RBP12.89□□□□□ -0.35
MECP2-202ENST00000369957 AMIGO3Q86WK7 504 aa12.89□□□□□ -0.35
MECP2-202ENST00000369957 ST20-MTHFSA0A0A6YYL1 179 aa12.88□□□□□ -0.35
MECP2-202ENST00000369957 SMIM5Q71RC9 77 aa12.88□□□□□ -0.35
MECP2-202ENST00000369957 USP47Q96K76 1375 aa12.88□□□□□ -0.35
MECP2-202ENST00000369957 FYB1O15117 783 aa12.87□□□□□ -0.35
MECP2-202ENST00000369957 EIF4G2P78344 907 aaKnown RBP eCLIP12.87□□□□□ -0.35
MECP2-202ENST00000369957 GGNBP2Q9H3C7 697 aa12.87□□□□□ -0.35
MECP2-202ENST00000369957 C5P01031 1676 aa12.86□□□□□ -0.35
MECP2-202ENST00000369957 TAF1LQ8IZX4 1826 aa12.86□□□□□ -0.35
MECP2-202ENST00000369957 RTL1A6NKG5 1358 aa12.85□□□□□ -0.35
MECP2-202ENST00000369957 GRIN3BO60391 1043 aa12.85□□□□□ -0.35
MECP2-202ENST00000369957 HSP90AB2PQ58FF8 381 aa12.85□□□□□ -0.35
MECP2-202ENST00000369957 ATP10DQ9P241 1426 aa12.85□□□□□ -0.35
MECP2-202ENST00000369957 TOGARAM1Q9Y4F4 1720 aa12.85□□□□□ -0.35
MECP2-202ENST00000369957 CYP27B1O15528 508 aa12.84□□□□□ -0.35
MECP2-202ENST00000369957 CEP350Q5VT06 3117 aa12.84□□□□□ -0.35
MECP2-202ENST00000369957 PALLDQ8WX93 1383 aa12.83□□□□□ -0.36
MECP2-202ENST00000369957 TMF1P82094 1093 aa12.83□□□□□ -0.36
MECP2-202ENST00000369957 IFFO2Q5TF58 517 aa12.83□□□□□ -0.36
MECP2-202ENST00000369957 MPRIPQ6WCQ1 1025 aa12.83□□□□□ -0.36
MECP2-202ENST00000369957 RAPGEF4Q8WZA2 1011 aa12.83□□□□□ -0.36
MECP2-202ENST00000369957 CD2APQ9Y5K6 639 aa12.83□□□□□ -0.36
MECP2-202ENST00000369957 CGNL1Q0VF96 1302 aa12.83□□□□□ -0.36
MECP2-202ENST00000369957 ADCY9O60503 1353 aa12.82□□□□□ -0.36
MECP2-202ENST00000369957 TATP17735 454 aaPredicted RBP12.82□□□□□ -0.36
MECP2-202ENST00000369957 CDCA8Q53HL2 280 aa12.82□□□□□ -0.36
MECP2-202ENST00000369957 WWC3Q9ULE0 1092 aa12.82□□□□□ -0.36
MECP2-202ENST00000369957 ITGB4P16144 1822 aa12.82□□□□□ -0.36
MECP2-202ENST00000369957 C4BP0C0L5 1744 aa12.82□□□□□ -0.36
MECP2-202ENST00000369957 INSRP06213 1382 aa12.81□□□□□ -0.36
MECP2-202ENST00000369957 HSPA5P11021 654 aaKnown RBP12.81□□□□□ -0.36
MECP2-202ENST00000369957 PCDH11XQ9BZA7 1347 aa12.81□□□□□ -0.36
MECP2-202ENST00000369957 PCDH11YQ9BZA8 1340 aa12.81□□□□□ -0.36
MECP2-202ENST00000369957 UBR3Q6ZT12 1888 aa12.8□□□□□ -0.36
MECP2-202ENST00000369957 ZNF526Q8TF50 670 aaPredicted RBP12.8□□□□□ -0.36
MECP2-202ENST00000369957 PIGBQ92521 554 aa12.8□□□□□ -0.36
MECP2-202ENST00000369957 MAP2P11137 1827 aaKnown RBP12.79□□□□□ -0.36
MECP2-202ENST00000369957 PHF14O94880 888 aa12.79□□□□□ -0.36
MECP2-202ENST00000369957 CARD14Q9BXL6 1004 aa12.79□□□□□ -0.36
MECP2-202ENST00000369957 PKD1L3Q7Z443 1732 aa12.79□□□□□ -0.36
MECP2-202ENST00000369957 SMG6Q86US8 1419 aaKnown RBP12.79□□□□□ -0.36
MECP2-202ENST00000369957 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.78□□□□□ -0.36
MECP2-202ENST00000369957 LINC00116Q8NCU8 138 aa12.78□□□□□ -0.36
MECP2-202ENST00000369957 FLAD1Q8NFF5 587 aa12.78□□□□□ -0.36
MECP2-202ENST00000369957 GPBP1L1Q9HC44 474 aaPredicted RBP12.78□□□□□ -0.36
MECP2-202ENST00000369957 EMILIN1Q9Y6C2 1016 aa12.78□□□□□ -0.36
MECP2-202ENST00000369957 IGSF1Q8N6C5 1336 aa12.78□□□□□ -0.36
MECP2-202ENST00000369957 KIF20BQ96Q89 1820 aa12.78□□□□□ -0.36
MECP2-202ENST00000369957 FLT4P35916 1363 aa12.78□□□□□ -0.36
MECP2-202ENST00000369957 NKX1-1Q15270 411 aaPredicted RBP12.77□□□□□ -0.37
MECP2-202ENST00000369957 AK7Q96M32 723 aa12.77□□□□□ -0.37
MECP2-202ENST00000369957 NCAPD2Q15021 1401 aa12.77□□□□□ -0.37
MECP2-202ENST00000369957 HSPA6P17066 643 aa12.76□□□□□ -0.37
MECP2-202ENST00000369957 ITPK1Q13572 414 aa12.76□□□□□ -0.37
MECP2-202ENST00000369957 SMARCC1Q92922 1105 aaPredicted RBP12.76□□□□□ -0.37
MECP2-202ENST00000369957 ASAP1Q9ULH1 1129 aa12.76□□□□□ -0.37
MECP2-202ENST00000369957 LOC102724428A0A0B4J2F2 783 aa12.75□□□□□ -0.37
MECP2-202ENST00000369957 KIF3CO14782 793 aa12.75□□□□□ -0.37
MECP2-202ENST00000369957 SIK1P57059 783 aa12.75□□□□□ -0.37
MECP2-202ENST00000369957 POLR3GLQ9BT43 218 aa12.75□□□□□ -0.37
MECP2-202ENST00000369957 KIF24Q5T7B8 1368 aa12.74□□□□□ -0.37
MECP2-202ENST00000369957 KIAA1551Q9HCM1 1747 aa12.74□□□□□ -0.37
MECP2-202ENST00000369957 SSFA2P28290 1259 aa12.73□□□□□ -0.37
MECP2-202ENST00000369957 EYA1Q99502 592 aa12.73□□□□□ -0.37
MECP2-202ENST00000369957 NSD3Q9BZ95 1437 aa12.72□□□□□ -0.37
MECP2-202ENST00000369957 ANKRD26Q9UPS8 1709 aa12.72□□□□□ -0.37
MECP2-202ENST00000369957 GNPATO15228 680 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms