RNA–Protein interactions for RNA: ENST00000369522.7

SYCP1-202, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-202ENST00000369522 MBIPQ9NS73 344 aa9.53□□□□□ -0.88
SYCP1-202ENST00000369522 RGS12O14924 1447 aa9.52□□□□□ -0.88
SYCP1-202ENST00000369522 TSC1Q92574 1164 aa9.52□□□□□ -0.88
SYCP1-202ENST00000369522 KIF24Q5T7B8 1368 aa9.52□□□□□ -0.89
SYCP1-202ENST00000369522 FAM177BA6PVY3 158 aa9.52□□□□□ -0.89
SYCP1-202ENST00000369522 SDSP20132 328 aa9.52□□□□□ -0.89
SYCP1-202ENST00000369522 NFE2L2Q16236 605 aa9.52□□□□□ -0.89
SYCP1-202ENST00000369522 SRPK2P78362 688 aaKnown RBP9.52□□□□□ -0.89
SYCP1-202ENST00000369522 INTS3Q68E01 1043 aaKnown RBP9.52□□□□□ -0.89
SYCP1-202ENST00000369522 IFT57Q9NWB7 429 aa9.52□□□□□ -0.89
SYCP1-202ENST00000369522 FBLN1P23142 703 aa9.51□□□□□ -0.89
SYCP1-202ENST00000369522 CSPP1Q1MSJ5 1256 aa9.51□□□□□ -0.89
SYCP1-202ENST00000369522 SASS6Q6UVJ0 657 aa9.51□□□□□ -0.89
SYCP1-202ENST00000369522 C8orf58Q8NAV2 365 aa9.51□□□□□ -0.89
SYCP1-202ENST00000369522 CCDC39Q9UFE4 941 aa9.51□□□□□ -0.89
SYCP1-202ENST00000369522 JARID2Q92833 1246 aaPredicted RBP9.51□□□□□ -0.89
SYCP1-202ENST00000369522 TWISTNBQ3B726 338 aaPredicted RBP9.5□□□□□ -0.89
SYCP1-202ENST00000369522 POLKQ9UBT6 870 aa9.5□□□□□ -0.89
SYCP1-202ENST00000369522 YTHDC2Q9H6S0 1430 aaKnown RBP9.5□□□□□ -0.89
SYCP1-202ENST00000369522 ST18O60284 1047 aa9.5□□□□□ -0.89
SYCP1-202ENST00000369522 HMOX1P09601 288 aa9.5□□□□□ -0.89
SYCP1-202ENST00000369522 CBX1P83916 185 aa9.5□□□□□ -0.89
SYCP1-202ENST00000369522 SMAP1Q8IYB5 467 aaPredicted RBP9.5□□□□□ -0.89
SYCP1-202ENST00000369522 CFAP44Q96MT7 982 aa9.5□□□□□ -0.89
SYCP1-202ENST00000369522 ASXL2Q76L83 1435 aa9.5□□□□□ -0.89
SYCP1-202ENST00000369522 GNAI1P63096 354 aa9.49□□□□□ -0.89
SYCP1-202ENST00000369522 ANKRD44Q8N8A2 993 aa9.49□□□□□ -0.89
SYCP1-202ENST00000369522 TERF2IPQ9NYB0 399 aa9.49□□□□□ -0.89
SYCP1-202ENST00000369522 VGFO15240 615 aaPredicted RBP9.49□□□□□ -0.89
SYCP1-202ENST00000369522 TCHHQ07283 1943 aa9.49□□□□□ -0.89
SYCP1-202ENST00000369522 SMARCA5O60264 1052 aaPredicted RBP9.49□□□□□ -0.89
SYCP1-202ENST00000369522 API5Q9BZZ5 524 aaKnown RBP9.49□□□□□ -0.89
SYCP1-202ENST00000369522 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.49□□□□□ -0.89
SYCP1-202ENST00000369522 RIMS2Q9UQ26 1411 aa9.49□□□□□ -0.89
SYCP1-202ENST00000369522 MINK1Q8N4C8 1332 aaPredicted RBP9.48□□□□□ -0.89
SYCP1-202ENST00000369522 CEP85Q6P2H3 762 aa9.48□□□□□ -0.89
SYCP1-202ENST00000369522 MTERF4Q7Z6M4 381 aaKnown RBP9.48□□□□□ -0.89
SYCP1-202ENST00000369522 ZNF830Q96NB3 372 aaPredicted RBP9.48□□□□□ -0.89
SYCP1-202ENST00000369522 STK26Q9P289 416 aa9.48□□□□□ -0.89
SYCP1-202ENST00000369522 TMEM131LA2VDJ0 1609 aa9.48□□□□□ -0.89
SYCP1-202ENST00000369522 BRD1O95696 1058 aa9.48□□□□□ -0.89
SYCP1-202ENST00000369522 BCL11BQ9C0K0 894 aaPredicted RBP9.48□□□□□ -0.89
SYCP1-202ENST00000369522 MSH6P52701 1360 aa9.47□□□□□ -0.89
SYCP1-202ENST00000369522 GGT6Q6P531 493 aa9.47□□□□□ -0.89
SYCP1-202ENST00000369522 RTL1A6NKG5 1358 aa9.47□□□□□ -0.89
SYCP1-202ENST00000369522 MLH3Q9UHC1 1453 aa9.47□□□□□ -0.89
SYCP1-202ENST00000369522 IGSF3O75054 1194 aa9.47□□□□□ -0.89
SYCP1-202ENST00000369522 MBD3O95983 291 aa9.47□□□□□ -0.89
SYCP1-202ENST00000369522 POGZQ7Z3K3 1410 aa9.47□□□□□ -0.89
SYCP1-202ENST00000369522 TMX3Q96JJ7 454 aa9.47□□□□□ -0.89
SYCP1-202ENST00000369522 PRAM1Q96QH2 718 aa9.47□□□□□ -0.89
SYCP1-202ENST00000369522 CPSF1Q10570 1443 aaKnown RBP9.47□□□□□ -0.89
SYCP1-202ENST00000369522 FAM83GA6ND36 823 aa9.47□□□□□ -0.89
SYCP1-202ENST00000369522 IL13P35225 146 aa9.47□□□□□ -0.89
SYCP1-202ENST00000369522 ZNF710Q8N1W2 664 aa9.47□□□□□ -0.89
SYCP1-202ENST00000369522 MYRIPQ8NFW9 859 aa9.47□□□□□ -0.89
SYCP1-202ENST00000369522 CDK12Q9NYV4 1490 aaPredicted RBP9.46□□□□□ -0.89
SYCP1-202ENST00000369522 CUL4AQ13619 759 aa9.46□□□□□ -0.89
SYCP1-202ENST00000369522 TSPY26PQ9H489 355 aa9.46□□□□□ -0.89
SYCP1-202ENST00000369522 PREX1Q8TCU6 1659 aa9.46□□□□□ -0.9
SYCP1-202ENST00000369522 ERC2O15083 957 aa9.46□□□□□ -0.9
SYCP1-202ENST00000369522 REC8O95072 547 aa9.46□□□□□ -0.9
SYCP1-202ENST00000369522 KIAA2012Q0VF49 1180 aa9.46□□□□□ -0.9
SYCP1-202ENST00000369522 C17orf53Q8N3J3 647 aaPredicted RBP9.46□□□□□ -0.9
SYCP1-202ENST00000369522 CCDC94Q9BW85 323 aaPredicted RBP9.46□□□□□ -0.9
SYCP1-202ENST00000369522 CABP1Q9NZU7 370 aa9.46□□□□□ -0.9
SYCP1-202ENST00000369522 KRT24Q2M2I5 525 aa9.45□□□□□ -0.9
SYCP1-202ENST00000369522 HDGFL2Q7Z4V5 671 aaPredicted RBP9.45□□□□□ -0.9
SYCP1-202ENST00000369522 SPDYE4A6NLX3 237 aa9.45□□□□□ -0.9
SYCP1-202ENST00000369522 CASC1Q6TDU7 716 aa9.45□□□□□ -0.9
SYCP1-202ENST00000369522 RPAP2Q8IXW5 612 aaPredicted RBP9.45□□□□□ -0.9
SYCP1-202ENST00000369522 EMILIN1Q9Y6C2 1016 aa9.45□□□□□ -0.9
SYCP1-202ENST00000369522 ATP7BP35670 1465 aa9.45□□□□□ -0.9
SYCP1-202ENST00000369522 GADD45BO75293 160 aaPredicted RBP9.45□□□□□ -0.9
SYCP1-202ENST00000369522 CDK19Q9BWU1 502 aa9.45□□□□□ -0.9
SYCP1-202ENST00000369522 GDPD2Q9HCC8 539 aa9.45□□□□□ -0.9
SYCP1-202ENST00000369522 ALKQ9UM73 1620 aa9.45□□□□□ -0.9
SYCP1-202ENST00000369522 GTF2F1P35269 517 aaKnown RBP eCLIP9.44□□□□□ -0.9
SYCP1-202ENST00000369522 NEK4P51957 841 aa9.44□□□□□ -0.9
SYCP1-202ENST00000369522 DCTN1Q14203 1278 aa9.44□□□□□ -0.9
SYCP1-202ENST00000369522 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.44□□□□□ -0.9
SYCP1-202ENST00000369522 OSBPL3Q9H4L5 887 aa9.44□□□□□ -0.9
SYCP1-202ENST00000369522 PALD1Q9ULE6 856 aa9.44□□□□□ -0.9
SYCP1-202ENST00000369522 NRKQ7Z2Y5 1582 aa9.44□□□□□ -0.9
SYCP1-202ENST00000369522 PIBF1Q8WXW3 757 aa9.44□□□□□ -0.9
SYCP1-202ENST00000369522 MEIS3Q99687 375 aa9.44□□□□□ -0.9
SYCP1-202ENST00000369522 RIMBP3CA6NJZ7 1639 aa9.44□□□□□ -0.9
SYCP1-202ENST00000369522 RIMBP3BA6NNM3 1639 aa9.44□□□□□ -0.9
SYCP1-202ENST00000369522 RIMBP3Q9UFD9 1639 aa9.44□□□□□ -0.9
SYCP1-202ENST00000369522 SETD1AO15047 1707 aaKnown RBP9.43□□□□□ -0.9
SYCP1-202ENST00000369522 ZSCAN20P17040 1043 aaPredicted RBP9.43□□□□□ -0.9
SYCP1-202ENST00000369522 DMTNQ08495 405 aa9.43□□□□□ -0.9
SYCP1-202ENST00000369522 IDI1Q13907 227 aa9.43□□□□□ -0.9
SYCP1-202ENST00000369522 SALL3Q9BXA9 1300 aa9.43□□□□□ -0.9
SYCP1-202ENST00000369522 MON2Q7Z3U7 1717 aa9.43□□□□□ -0.9
SYCP1-202ENST00000369522 PDE1AP54750 535 aa9.43□□□□□ -0.9
SYCP1-202ENST00000369522 KIAA0232Q92628 1395 aa9.42□□□□□ -0.9
SYCP1-202ENST00000369522 PPP4R3BQ5MIZ7 849 aa9.42□□□□□ -0.9
SYCP1-202ENST00000369522 UTP14CQ5TAP6 766 aaKnown RBP9.42□□□□□ -0.9
SYCP1-202ENST00000369522 INTS4Q96HW7 963 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms