RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 ABCC6O95255 1503 aa18.3■□□□□ 0.52
HMGCS2-201ENST00000369406 LMOD3Q0VAK6 560 aa18.29■□□□□ 0.52
HMGCS2-201ENST00000369406 CFAP44Q96MT7 982 aa18.28■□□□□ 0.52
HMGCS2-201ENST00000369406 PHLPP1O60346 1717 aa18.27■□□□□ 0.52
HMGCS2-201ENST00000369406 KRT24Q2M2I5 525 aa18.27■□□□□ 0.52
HMGCS2-201ENST00000369406 MIS18AQ9NYP9 233 aa18.27■□□□□ 0.52
HMGCS2-201ENST00000369406 COL16A1Q07092 1604 aaPredicted RBP18.27■□□□□ 0.51
HMGCS2-201ENST00000369406 GNAI1P63096 354 aa18.27■□□□□ 0.51
HMGCS2-201ENST00000369406 GAS2L2Q8NHY3 880 aa18.27■□□□□ 0.51
HMGCS2-201ENST00000369406 C8orf58Q8NAV2 365 aa18.26■□□□□ 0.51
HMGCS2-201ENST00000369406 SSH1Q8WYL5 1049 aa18.26■□□□□ 0.51
HMGCS2-201ENST00000369406 MAP3K5Q99683 1374 aa18.26■□□□□ 0.51
HMGCS2-201ENST00000369406 MEGF6O75095 1541 aa18.26■□□□□ 0.51
HMGCS2-201ENST00000369406 IL17REQ8NFR9 667 aa18.25■□□□□ 0.51
HMGCS2-201ENST00000369406 COL22A1Q8NFW1 1626 aaPredicted RBP18.25■□□□□ 0.51
HMGCS2-201ENST00000369406 ELL2O00472 640 aaPredicted RBP18.24■□□□□ 0.51
HMGCS2-201ENST00000369406 CHL1O00533 1208 aa18.24■□□□□ 0.51
HMGCS2-201ENST00000369406 CALD1Q05682 793 aaKnown RBP18.24■□□□□ 0.51
HMGCS2-201ENST00000369406 GNAT3A8MTJ3 354 aa18.23■□□□□ 0.51
HMGCS2-201ENST00000369406 PANK1Q8TE04 598 aa18.23■□□□□ 0.51
HMGCS2-201ENST00000369406 FRAT1Q92837 279 aaPredicted RBP18.23■□□□□ 0.51
HMGCS2-201ENST00000369406 NLRP2Q9NX02 1062 aa18.23■□□□□ 0.51
HMGCS2-201ENST00000369406 COL5A2P05997 1499 aaPredicted RBP18.23■□□□□ 0.51
HMGCS2-201ENST00000369406 RLBP1P12271 317 aa18.23■□□□□ 0.51
HMGCS2-201ENST00000369406 PRDM11Q9NQV5 511 aa18.23■□□□□ 0.51
HMGCS2-201ENST00000369406 VAMP4O75379 141 aa18.22■□□□□ 0.51
HMGCS2-201ENST00000369406 SIPA1L3O60292 1781 aaPredicted RBP18.22■□□□□ 0.51
HMGCS2-201ENST00000369406 PKD1L3Q7Z443 1732 aa18.22■□□□□ 0.51
HMGCS2-201ENST00000369406 LGR6Q9HBX8 967 aa18.22■□□□□ 0.51
HMGCS2-201ENST00000369406 ADAMTS7Q9UKP4 1686 aa18.21■□□□□ 0.51
HMGCS2-201ENST00000369406 TCERG1O14776 1098 aaKnown RBP18.21■□□□□ 0.51
HMGCS2-201ENST00000369406 CT47B1P0C2W7 299 aaPredicted RBP18.21■□□□□ 0.51
HMGCS2-201ENST00000369406 RTF1Q92541 710 aaKnown RBP18.21■□□□□ 0.51
HMGCS2-201ENST00000369406 KDM3BQ7LBC6 1761 aa18.21■□□□□ 0.51
HMGCS2-201ENST00000369406 SMC4Q9NTJ3 1288 aa18.2■□□□□ 0.5
HMGCS2-201ENST00000369406 ZNF530Q6P9A1 599 aaPredicted RBP18.2■□□□□ 0.5
HMGCS2-201ENST00000369406 CEMIPQ8WUJ3 1361 aa18.19■□□□□ 0.5
HMGCS2-201ENST00000369406 SCN11AQ9UI33 1791 aa18.19■□□□□ 0.5
HMGCS2-201ENST00000369406 CSB-PGBD3P0DP91 1061 aa18.19■□□□□ 0.5
HMGCS2-201ENST00000369406 PIP4K2BP78356 416 aa18.19■□□□□ 0.5
HMGCS2-201ENST00000369406 SHANK3Q9BYB0 1731 aa18.19■□□□□ 0.5
HMGCS2-201ENST00000369406 HAP1P54257 671 aaPredicted RBP18.19■□□□□ 0.5
HMGCS2-201ENST00000369406 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.19■□□□□ 0.5
HMGCS2-201ENST00000369406 HTATSF1O43719 755 aaKnown RBP18.18■□□□□ 0.5
HMGCS2-201ENST00000369406 TWISTNBQ3B726 338 aaPredicted RBP18.18■□□□□ 0.5
HMGCS2-201ENST00000369406 CLUAP1Q96AJ1 413 aa18.18■□□□□ 0.5
HMGCS2-201ENST00000369406 MPRIPQ6WCQ1 1025 aa18.17■□□□□ 0.5
HMGCS2-201ENST00000369406 CANXP27824 592 aaKnown RBP18.17■□□□□ 0.5
HMGCS2-201ENST00000369406 PLEKHO1Q53GL0 409 aaPredicted RBP18.17■□□□□ 0.5
HMGCS2-201ENST00000369406 CCDC136Q96JN2 1154 aa18.17■□□□□ 0.5
HMGCS2-201ENST00000369406 COG6Q9Y2V7 657 aa18.17■□□□□ 0.5
HMGCS2-201ENST00000369406 PARP4Q9UKK3 1724 aaKnown RBP18.16■□□□□ 0.5
HMGCS2-201ENST00000369406 WDR17Q8IZU2 1322 aa18.16■□□□□ 0.5
HMGCS2-201ENST00000369406 NOB1Q9ULX3 412 aaKnown RBP18.16■□□□□ 0.5
HMGCS2-201ENST00000369406 COL14A1Q05707 1796 aaKnown RBP18.16■□□□□ 0.5
HMGCS2-201ENST00000369406 TSPYL4Q9UJ04 414 aa18.15■□□□□ 0.5
HMGCS2-201ENST00000369406 PLCH1Q4KWH8 1693 aa18.15■□□□□ 0.5
HMGCS2-201ENST00000369406 TRIM27P14373 513 aa18.15■□□□□ 0.5
HMGCS2-201ENST00000369406 PDE3AQ14432 1141 aa18.15■□□□□ 0.5
HMGCS2-201ENST00000369406 AKAP4Q5JQC9 854 aa18.15■□□□□ 0.5
HMGCS2-201ENST00000369406 MRPL50Q8N5N7 158 aaKnown RBP18.15■□□□□ 0.5
HMGCS2-201ENST00000369406 LARP1Q6PKG0 1096 aaKnown RBP18.14■□□□□ 0.5
HMGCS2-201ENST00000369406 KDM6AO15550 1401 aaPredicted RBP18.14■□□□□ 0.49
HMGCS2-201ENST00000369406 ALDH1L2Q3SY69 923 aa18.14■□□□□ 0.49
HMGCS2-201ENST00000369406 AMOTQ4VCS5 1084 aa18.13■□□□□ 0.49
HMGCS2-201ENST00000369406 STRN4Q9NRL3 753 aa18.13■□□□□ 0.49
HMGCS2-201ENST00000369406 KCNQ3O43525 872 aa18.12■□□□□ 0.49
HMGCS2-201ENST00000369406 ZKSCAN2Q63HK3 967 aa18.12■□□□□ 0.49
HMGCS2-201ENST00000369406 RAPGEF4Q8WZA2 1011 aa18.12■□□□□ 0.49
HMGCS2-201ENST00000369406 RNMTO43148 476 aaKnown RBP18.12■□□□□ 0.49
HMGCS2-201ENST00000369406 OVOS2A0A0G2JMS6 1433 aa18.12■□□□□ 0.49
HMGCS2-201ENST00000369406 UBAP1LF5GYI3 381 aa18.11■□□□□ 0.49
HMGCS2-201ENST00000369406 TAF7Q15545 349 aaPredicted RBP18.11■□□□□ 0.49
HMGCS2-201ENST00000369406 TOM1L2Q6ZVM7 507 aa18.11■□□□□ 0.49
HMGCS2-201ENST00000369406 NRAPQ86VF7 1730 aa18.11■□□□□ 0.49
HMGCS2-201ENST00000369406 CYP27B1O15528 508 aa18.11■□□□□ 0.49
HMGCS2-201ENST00000369406 TATP17735 454 aaPredicted RBP18.11■□□□□ 0.49
HMGCS2-201ENST00000369406 TOM1O60784 492 aa18.1■□□□□ 0.49
HMGCS2-201ENST00000369406 BTG4Q9NY30 223 aa18.1■□□□□ 0.49
HMGCS2-201ENST00000369406 BRPF1P55201 1214 aaPredicted RBP18.1■□□□□ 0.49
HMGCS2-201ENST00000369406 ATF7IPQ6VMQ6 1270 aa18.1■□□□□ 0.49
HMGCS2-201ENST00000369406 AEBP2Q6ZN18 517 aaPredicted RBP18.1■□□□□ 0.49
HMGCS2-201ENST00000369406 WNK3Q9BYP7 1800 aa18.09■□□□□ 0.49
HMGCS2-201ENST00000369406 PHKG2P15735 406 aa18.09■□□□□ 0.49
HMGCS2-201ENST00000369406 C1orf141Q5JVX7 400 aa18.09■□□□□ 0.49
HMGCS2-201ENST00000369406 ZNF428Q96B54 188 aa18.09■□□□□ 0.49
HMGCS2-201ENST00000369406 SKAP1Q86WV1 359 aa18.08■□□□□ 0.49
HMGCS2-201ENST00000369406 DZIP1LQ8IYY4 767 aaKnown RBP18.08■□□□□ 0.49
HMGCS2-201ENST00000369406 RGS12O14924 1447 aa18.08■□□□□ 0.48
HMGCS2-201ENST00000369406 KIF16BQ96L93 1317 aa18.07■□□□□ 0.48
HMGCS2-201ENST00000369406 TMEM57Q8N5G2 664 aa18.07■□□□□ 0.48
HMGCS2-201ENST00000369406 CARD10Q9BWT7 1032 aa18.07■□□□□ 0.48
HMGCS2-201ENST00000369406 TOGARAM1Q9Y4F4 1720 aa18.07■□□□□ 0.48
HMGCS2-201ENST00000369406 C5P01031 1676 aa18.07■□□□□ 0.48
HMGCS2-201ENST00000369406 CACNA1FO60840 1977 aa18.06■□□□□ 0.48
HMGCS2-201ENST00000369406 ADAMTS2O95450 1211 aa18.06■□□□□ 0.48
HMGCS2-201ENST00000369406 MVPQ14764 893 aaKnown RBP18.06■□□□□ 0.48
HMGCS2-201ENST00000369406 USP35Q9P2H5 1018 aa18.06■□□□□ 0.48
HMGCS2-201ENST00000369406 KDM2BQ8NHM5 1336 aa18.06■□□□□ 0.48
HMGCS2-201ENST00000369406 EVA1CP58658 441 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms