RNA–Protein interactions for RNA: ENST00000369208.7

SIM1-202, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 8,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-202ENST00000369208 SYCP1Q15431 976 aa11.82□□□□□ -0.52
SIM1-202ENST00000369208 KIF3CO14782 793 aa11.82□□□□□ -0.52
SIM1-202ENST00000369208 GTF2F1P35269 517 aaKnown RBP eCLIP11.82□□□□□ -0.52
SIM1-202ENST00000369208 MAP2K2P36507 400 aa11.82□□□□□ -0.52
SIM1-202ENST00000369208 OLFM4Q6UX06 510 aa11.82□□□□□ -0.52
SIM1-202ENST00000369208 ZNF652Q9Y2D9 606 aa11.82□□□□□ -0.52
SIM1-202ENST00000369208 IFT140Q96RY7 1462 aa11.82□□□□□ -0.52
SIM1-202ENST00000369208 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.82□□□□□ -0.52
SIM1-202ENST00000369208 CLASRPQ8N2M8 674 aaKnown RBP11.82□□□□□ -0.52
SIM1-202ENST00000369208 BICD2Q8TD16 824 aa11.81□□□□□ -0.52
SIM1-202ENST00000369208 NAP1L1P55209 391 aaKnown RBP11.81□□□□□ -0.52
SIM1-202ENST00000369208 NECTIN2Q92692 538 aa11.81□□□□□ -0.52
SIM1-202ENST00000369208 SMARCE1Q969G3 411 aa11.81□□□□□ -0.52
SIM1-202ENST00000369208 ZFYVE27Q5T4F4 411 aa11.81□□□□□ -0.52
SIM1-202ENST00000369208 PRDM11Q9NQV5 511 aa11.81□□□□□ -0.52
SIM1-202ENST00000369208 SMC3Q9UQE7 1217 aa11.81□□□□□ -0.52
SIM1-202ENST00000369208 ANKRD18AQ8IVF6 992 aa11.81□□□□□ -0.52
SIM1-202ENST00000369208 PLIN1O60240 522 aa11.8□□□□□ -0.52
SIM1-202ENST00000369208 DNAJC21Q5F1R6 531 aaKnown RBP11.8□□□□□ -0.52
SIM1-202ENST00000369208 CCDC38Q502W7 563 aa11.8□□□□□ -0.52
SIM1-202ENST00000369208 ZNHIT6Q9NWK9 470 aaKnown RBP11.8□□□□□ -0.52
SIM1-202ENST00000369208 HSP90AB2PQ58FF8 381 aa11.8□□□□□ -0.52
SIM1-202ENST00000369208 PIP4K2BP78356 416 aa11.8□□□□□ -0.52
SIM1-202ENST00000369208 CRACR2AQ9BSW2 395 aa11.8□□□□□ -0.52
SIM1-202ENST00000369208 MPHOSPH8Q99549 860 aa11.8□□□□□ -0.52
SIM1-202ENST00000369208 ZNF287Q9HBT7 754 aa11.8□□□□□ -0.52
SIM1-202ENST00000369208 RBM5P52756 815 aaKnown RBP eCLIP11.79□□□□□ -0.52
SIM1-202ENST00000369208 KIF21BO75037 1637 aa11.79□□□□□ -0.52
SIM1-202ENST00000369208 PTPN14Q15678 1187 aa11.79□□□□□ -0.52
SIM1-202ENST00000369208 TACO1Q9BSH4 297 aaKnown RBP11.79□□□□□ -0.52
SIM1-202ENST00000369208 CCDC7Q96M83 1385 aa11.79□□□□□ -0.52
SIM1-202ENST00000369208 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.79□□□□□ -0.52
SIM1-202ENST00000369208 SMC2O95347 1197 aa11.79□□□□□ -0.52
SIM1-202ENST00000369208 TTC39AQ5SRH9 613 aa11.79□□□□□ -0.52
SIM1-202ENST00000369208 TICAM2Q86XR7 235 aa11.79□□□□□ -0.52
SIM1-202ENST00000369208 POTEDQ86YR6 584 aa11.79□□□□□ -0.52
SIM1-202ENST00000369208 ANKRD50Q9ULJ7 1429 aa11.79□□□□□ -0.52
SIM1-202ENST00000369208 UVSSAQ2YD98 709 aa11.78□□□□□ -0.52
SIM1-202ENST00000369208 KRT18P05783 430 aaKnown RBP11.78□□□□□ -0.52
SIM1-202ENST00000369208 PRG4Q92954 1404 aaPredicted RBP11.78□□□□□ -0.52
SIM1-202ENST00000369208 CNPY4Q8N129 248 aa11.78□□□□□ -0.52
SIM1-202ENST00000369208 TUBBP07437 444 aa11.78□□□□□ -0.52
SIM1-202ENST00000369208 ZNF853P0CG23 659 aa11.78□□□□□ -0.52
SIM1-202ENST00000369208 RNF214Q8ND24 703 aa11.78□□□□□ -0.52
SIM1-202ENST00000369208 CCDC102AQ96A19 550 aa11.78□□□□□ -0.52
SIM1-202ENST00000369208 ZBTB17Q13105 803 aa11.77□□□□□ -0.52
SIM1-202ENST00000369208 DZIP1Q86YF9 867 aaKnown RBP11.77□□□□□ -0.53
SIM1-202ENST00000369208 FSD1Q9BTV5 496 aa11.77□□□□□ -0.53
SIM1-202ENST00000369208 CCDC171Q6TFL3 1326 aa11.77□□□□□ -0.53
SIM1-202ENST00000369208 LUC7LQ9NQ29 371 aaKnown RBP11.77□□□□□ -0.53
SIM1-202ENST00000369208 CAVIN2O95810 425 aa11.77□□□□□ -0.53
SIM1-202ENST00000369208 PDCP20941 246 aa11.77□□□□□ -0.53
SIM1-202ENST00000369208 LRPPRCP42704 1394 aaKnown RBP11.77□□□□□ -0.53
SIM1-202ENST00000369208 CBFA2T2O43439 604 aa11.77□□□□□ -0.53
SIM1-202ENST00000369208 HSPA4P34932 840 aa11.77□□□□□ -0.53
SIM1-202ENST00000369208 HFM1A2PYH4 1435 aa11.77□□□□□ -0.53
SIM1-202ENST00000369208 STARD3NLO95772 234 aa11.76□□□□□ -0.53
SIM1-202ENST00000369208 NUTM2GQ5VZR2 741 aa11.76□□□□□ -0.53
SIM1-202ENST00000369208 RPAINQ86UA6 219 aa11.76□□□□□ -0.53
SIM1-202ENST00000369208 SRRTQ9BXP5 876 aaKnown RBP11.76□□□□□ -0.53
SIM1-202ENST00000369208 KCNH5Q8NCM2 988 aa11.76□□□□□ -0.53
SIM1-202ENST00000369208 MAGEC2Q9UBF1 373 aaPredicted RBP11.76□□□□□ -0.53
SIM1-202ENST00000369208 RPGRIP1LQ68CZ1 1315 aa11.76□□□□□ -0.53
SIM1-202ENST00000369208 EXOC6Q8TAG9 804 aa11.76□□□□□ -0.53
SIM1-202ENST00000369208 GIGYF2Q6Y7W6 1299 aaKnown RBP11.76□□□□□ -0.53
SIM1-202ENST00000369208 ZNF397Q8NF99 534 aaPredicted RBP11.76□□□□□ -0.53
SIM1-202ENST00000369208 FOXD4L1Q9NU39 408 aa11.76□□□□□ -0.53
SIM1-202ENST00000369208 FMNL2Q96PY5 1086 aa11.76□□□□□ -0.53
SIM1-202ENST00000369208 SOGA3Q5TF21 947 aa11.76□□□□□ -0.53
SIM1-202ENST00000369208 JMYQ8N9B5 988 aa11.76□□□□□ -0.53
SIM1-202ENST00000369208 SPATS2LQ9NUQ6 558 aaKnown RBP11.76□□□□□ -0.53
SIM1-202ENST00000369208 MKRN1Q9UHC7 482 aaKnown RBP11.76□□□□□ -0.53
SIM1-202ENST00000369208 ZSCAN12O43309 604 aa11.75□□□□□ -0.53
SIM1-202ENST00000369208 TRIM22Q8IYM9 498 aa11.75□□□□□ -0.53
SIM1-202ENST00000369208 BCL2L13Q9BXK5 485 aa11.75□□□□□ -0.53
SIM1-202ENST00000369208 CEP112Q8N8E3 955 aa11.75□□□□□ -0.53
SIM1-202ENST00000369208 CCDC196A0A1B0GTZ2 297 aa11.75□□□□□ -0.53
SIM1-202ENST00000369208 CCDC57Q2TAC2 916 aa11.75□□□□□ -0.53
SIM1-202ENST00000369208 CRBNQ96SW2 442 aa11.75□□□□□ -0.53
SIM1-202ENST00000369208 FOXD4L5Q5VV16 416 aaPredicted RBP11.75□□□□□ -0.53
SIM1-202ENST00000369208 FOXD4L4Q8WXT5 416 aaPredicted RBP11.75□□□□□ -0.53
SIM1-202ENST00000369208 ZPR1O75312 459 aa11.75□□□□□ -0.53
SIM1-202ENST00000369208 ATP2B2Q01814 1243 aa11.75□□□□□ -0.53
SIM1-202ENST00000369208 APAF1O14727 1248 aa11.74□□□□□ -0.53
SIM1-202ENST00000369208 HMOX1P09601 288 aa11.74□□□□□ -0.53
SIM1-202ENST00000369208 TNIP1Q15025 636 aa11.74□□□□□ -0.53
SIM1-202ENST00000369208 ZMAT2Q96NC0 199 aaKnown RBP11.74□□□□□ -0.53
SIM1-202ENST00000369208 IGHMBP2P38935 993 aaKnown RBP11.74□□□□□ -0.53
SIM1-202ENST00000369208 STIM1Q13586 685 aa11.74□□□□□ -0.53
SIM1-202ENST00000369208 LMAN1P49257 510 aa11.74□□□□□ -0.53
SIM1-202ENST00000369208 DAPK1P53355 1430 aa11.74□□□□□ -0.53
SIM1-202ENST00000369208 VPS37CA5D8V6 355 aaPredicted RBP11.74□□□□□ -0.53
SIM1-202ENST00000369208 VGLL3A8MV65 326 aa11.74□□□□□ -0.53
SIM1-202ENST00000369208 MTHFSP49914 203 aa11.73□□□□□ -0.53
SIM1-202ENST00000369208 ZKSCAN5Q9Y2L8 839 aa11.73□□□□□ -0.53
SIM1-202ENST00000369208 FAM177BA6PVY3 158 aa11.73□□□□□ -0.53
SIM1-202ENST00000369208 FILIP1LQ4L180 1135 aa11.73□□□□□ -0.53
SIM1-202ENST00000369208 DDX54Q8TDD1 881 aaKnown RBP11.73□□□□□ -0.53
SIM1-202ENST00000369208 ANKRD18BA2A2Z9 1011 aa11.73□□□□□ -0.53
SIM1-202ENST00000369208 ZSCAN29Q8IWY8 852 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms