RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 A0A0G2JS52 829 aa12.27□□□□□ -0.45
PRDM1-201ENST00000369089 DHX16O60231 1041 aaKnown RBP12.27□□□□□ -0.45
PRDM1-201ENST00000369089 ANAPC15P60006 121 aa12.27□□□□□ -0.45
PRDM1-201ENST00000369089 INTS3Q68E01 1043 aaKnown RBP12.27□□□□□ -0.45
PRDM1-201ENST00000369089 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.27□□□□□ -0.45
PRDM1-201ENST00000369089 SMARCC1Q92922 1105 aaPredicted RBP12.27□□□□□ -0.45
PRDM1-201ENST00000369089 RSRC1Q96IZ7 334 aaKnown RBP12.27□□□□□ -0.45
PRDM1-201ENST00000369089 RRP15Q9Y3B9 282 aaKnown RBP12.27□□□□□ -0.45
PRDM1-201ENST00000369089 TROQ12816 1431 aaPredicted RBP12.27□□□□□ -0.45
PRDM1-201ENST00000369089 EBAG9O00559 213 aa12.26□□□□□ -0.45
PRDM1-201ENST00000369089 CEP57Q86XR8 500 aa12.26□□□□□ -0.45
PRDM1-201ENST00000369089 RPUSD2Q8IZ73 545 aaKnown RBP12.26□□□□□ -0.45
PRDM1-201ENST00000369089 NGEFQ8N5V2 710 aa12.26□□□□□ -0.45
PRDM1-201ENST00000369089 CXorf56Q9H5V9 222 aa12.26□□□□□ -0.45
PRDM1-201ENST00000369089 DDX19BQ9UMR2 479 aa12.26□□□□□ -0.45
PRDM1-201ENST00000369089 RAD51AP2Q09MP3 1159 aa12.26□□□□□ -0.45
PRDM1-201ENST00000369089 GOLGA5Q8TBA6 731 aa12.26□□□□□ -0.45
PRDM1-201ENST00000369089 KIAA0586Q9BVV6 1533 aa12.26□□□□□ -0.45
PRDM1-201ENST00000369089 MYO1CO00159 1063 aa12.26□□□□□ -0.45
PRDM1-201ENST00000369089 JAKMIP3Q5VZ66 844 aa12.26□□□□□ -0.45
PRDM1-201ENST00000369089 NEK11Q8NG66 645 aa12.26□□□□□ -0.45
PRDM1-201ENST00000369089 EHBP1L1Q8N3D4 1523 aa12.26□□□□□ -0.45
PRDM1-201ENST00000369089 MKRN1Q9UHC7 482 aaKnown RBP12.26□□□□□ -0.45
PRDM1-201ENST00000369089 URI1O94763 535 aaPredicted RBP12.25□□□□□ -0.45
PRDM1-201ENST00000369089 TRDNQ13061 729 aa12.25□□□□□ -0.45
PRDM1-201ENST00000369089 GAS2L3Q86XJ1 694 aa12.25□□□□□ -0.45
PRDM1-201ENST00000369089 VEZTQ9HBM0 779 aa12.25□□□□□ -0.45
PRDM1-201ENST00000369089 RNF187Q5TA31 235 aaPredicted RBP12.25□□□□□ -0.45
PRDM1-201ENST00000369089 NUTM1Q86Y26 1132 aa12.25□□□□□ -0.45
PRDM1-201ENST00000369089 CCDC97Q96F63 343 aaPredicted RBP12.25□□□□□ -0.45
PRDM1-201ENST00000369089 WDR33Q9C0J8 1336 aaKnown RBP12.25□□□□□ -0.45
PRDM1-201ENST00000369089 HFM1A2PYH4 1435 aa12.25□□□□□ -0.45
PRDM1-201ENST00000369089 IPO7O95373 1038 aaKnown RBP12.25□□□□□ -0.45
PRDM1-201ENST00000369089 LNPKQ9C0E8 428 aa12.25□□□□□ -0.45
PRDM1-201ENST00000369089 CCDC146Q8IYE0 955 aa12.25□□□□□ -0.45
PRDM1-201ENST00000369089 APBB1O00213 710 aa12.24□□□□□ -0.45
PRDM1-201ENST00000369089 DNAJC21Q5F1R6 531 aaKnown RBP12.24□□□□□ -0.45
PRDM1-201ENST00000369089 POTEDQ86YR6 584 aa12.24□□□□□ -0.45
PRDM1-201ENST00000369089 ERLIN2O94905 339 aa12.24□□□□□ -0.45
PRDM1-201ENST00000369089 NBPF11Q86T75 865 aa12.24□□□□□ -0.45
PRDM1-201ENST00000369089 FEZ2Q9UHY8 353 aaPredicted RBP12.24□□□□□ -0.45
PRDM1-201ENST00000369089 RNF123Q5XPI4 1314 aa12.24□□□□□ -0.45
PRDM1-201ENST00000369089 POTEB2H3BUK9 544 aa12.24□□□□□ -0.45
PRDM1-201ENST00000369089 GUCY2CP25092 1073 aa12.24□□□□□ -0.45
PRDM1-201ENST00000369089 SMC5Q8IY18 1101 aa12.24□□□□□ -0.45
PRDM1-201ENST00000369089 SMC3Q9UQE7 1217 aa12.24□□□□□ -0.45
PRDM1-201ENST00000369089 KIF3CO14782 793 aa12.23□□□□□ -0.45
PRDM1-201ENST00000369089 FIBPO43427 364 aa12.23□□□□□ -0.45
PRDM1-201ENST00000369089 CALR3Q96L12 384 aaKnown RBP12.23□□□□□ -0.45
PRDM1-201ENST00000369089 RNF216Q9NWF9 866 aaPredicted RBP12.23□□□□□ -0.45
PRDM1-201ENST00000369089 TAOK2Q9UL54 1235 aa12.23□□□□□ -0.45
PRDM1-201ENST00000369089 SART3Q15020 963 aaKnown RBP12.23□□□□□ -0.45
PRDM1-201ENST00000369089 CRACR2AQ9BSW2 395 aa12.23□□□□□ -0.45
PRDM1-201ENST00000369089 SYT10Q6XYQ8 523 aa12.23□□□□□ -0.45
PRDM1-201ENST00000369089 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.23□□□□□ -0.45
PRDM1-201ENST00000369089 ERCC3P19447 782 aa12.23□□□□□ -0.45
PRDM1-201ENST00000369089 SNW1Q13573 536 aaKnown RBP12.23□□□□□ -0.45
PRDM1-201ENST00000369089 ARHGAP29Q52LW3 1261 aa12.23□□□□□ -0.45
PRDM1-201ENST00000369089 DZIP1LQ8IYY4 767 aaKnown RBP12.23□□□□□ -0.45
PRDM1-201ENST00000369089 IRAK4Q9NWZ3 460 aa12.23□□□□□ -0.45
PRDM1-201ENST00000369089 TRMT1Q9NXH9 659 aaKnown RBP12.23□□□□□ -0.45
PRDM1-201ENST00000369089 CLIP2Q9UDT6 1046 aa12.23□□□□□ -0.45
PRDM1-201ENST00000369089 SYCP1Q15431 976 aa12.22□□□□□ -0.45
PRDM1-201ENST00000369089 BCL2L13Q9BXK5 485 aa12.22□□□□□ -0.45
PRDM1-201ENST00000369089 EIF5P55010 431 aaKnown RBP12.22□□□□□ -0.45
PRDM1-201ENST00000369089 C20orf194Q5TEA3 1177 aa12.22□□□□□ -0.45
PRDM1-201ENST00000369089 SNX21Q969T3 373 aa12.22□□□□□ -0.45
PRDM1-201ENST00000369089 ZRSR2Q15696 482 aaKnown RBP12.22□□□□□ -0.45
PRDM1-201ENST00000369089 NBPF20Q3BBV1 942 aa12.22□□□□□ -0.45
PRDM1-201ENST00000369089 RAI14Q9P0K7 980 aa12.22□□□□□ -0.45
PRDM1-201ENST00000369089 VPS18Q9P253 973 aa12.22□□□□□ -0.45
PRDM1-201ENST00000369089 ZKSCAN8Q15776 578 aaPredicted RBP12.22□□□□□ -0.45
PRDM1-201ENST00000369089 URB2Q14146 1524 aaKnown RBP12.21□□□□□ -0.45
PRDM1-201ENST00000369089 RLBP1P12271 317 aa12.21□□□□□ -0.45
PRDM1-201ENST00000369089 EPRSP07814 1512 aaKnown RBP12.21□□□□□ -0.45
PRDM1-201ENST00000369089 MMS22LQ6ZRQ5 1243 aa12.21□□□□□ -0.45
PRDM1-201ENST00000369089 OTUD6BQ8N6M0 293 aa12.21□□□□□ -0.45
PRDM1-201ENST00000369089 SRRTQ9BXP5 876 aaKnown RBP12.21□□□□□ -0.45
PRDM1-201ENST00000369089 TNMDQ9H2S6 317 aa12.21□□□□□ -0.45
PRDM1-201ENST00000369089 PLEKHH1Q9ULM0 1364 aa12.21□□□□□ -0.45
PRDM1-201ENST00000369089 VPS37CA5D8V6 355 aaPredicted RBP12.21□□□□□ -0.46
PRDM1-201ENST00000369089 TUBB4AP04350 444 aa12.21□□□□□ -0.46
PRDM1-201ENST00000369089 MIPOL1Q8TD10 442 aa12.21□□□□□ -0.46
PRDM1-201ENST00000369089 ARHGAP5Q13017 1502 aa12.21□□□□□ -0.46
PRDM1-201ENST00000369089 CASTP20810 708 aaKnown RBP12.2□□□□□ -0.46
PRDM1-201ENST00000369089 RNF168Q8IYW5 571 aaPredicted RBP12.2□□□□□ -0.46
PRDM1-201ENST00000369089 SWAP70Q9UH65 585 aa12.2□□□□□ -0.46
PRDM1-201ENST00000369089 DDX41Q9UJV9 622 aaKnown RBP12.2□□□□□ -0.46
PRDM1-201ENST00000369089 EID1Q9Y6B2 187 aa12.2□□□□□ -0.46
PRDM1-201ENST00000369089 HCLS1P14317 486 aaPredicted RBP12.2□□□□□ -0.46
PRDM1-201ENST00000369089 MAGEA9P43362 315 aa12.2□□□□□ -0.46
PRDM1-201ENST00000369089 DBN1Q16643 649 aa12.2□□□□□ -0.46
PRDM1-201ENST00000369089 C17orf53Q8N3J3 647 aaPredicted RBP12.2□□□□□ -0.46
PRDM1-201ENST00000369089 DONSONQ9NYP3 566 aa12.2□□□□□ -0.46
PRDM1-201ENST00000369089 HECW1Q76N89 1606 aa12.2□□□□□ -0.46
PRDM1-201ENST00000369089 GOLGA6L9A6NEM1 432 aa12.2□□□□□ -0.46
PRDM1-201ENST00000369089 FAM69CQ0P6D2 419 aa12.2□□□□□ -0.46
PRDM1-201ENST00000369089 MAP9Q49MG5 647 aa12.2□□□□□ -0.46
PRDM1-201ENST00000369089 NEDD9Q14511 834 aa12.2□□□□□ -0.46
PRDM1-201ENST00000369089 SF3A1Q15459 793 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms