RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 TSR2Q969E8 191 aaKnown RBP31.06■■■□□ 2.56
SNX3-203ENST00000368979 FKBP8Q14318 412 aa31.04■■■□□ 2.56
SNX3-203ENST00000368979 GNAI1P63096 354 aa31.03■■■□□ 2.56
SNX3-203ENST00000368979 AMOTQ4VCS5 1084 aa31.03■■■□□ 2.56
SNX3-203ENST00000368979 MCM10Q7L590 875 aa31.03■■■□□ 2.56
SNX3-203ENST00000368979 CRB1P82279 1406 aa31.03■■■□□ 2.56
SNX3-203ENST00000368979 MEGF6O75095 1541 aa31.03■■■□□ 2.56
SNX3-203ENST00000368979 GNAT3A8MTJ3 354 aa31.03■■■□□ 2.56
SNX3-203ENST00000368979 PLEKHO1Q53GL0 409 aaPredicted RBP31.03■■■□□ 2.56
SNX3-203ENST00000368979 RRP1P56182 461 aaKnown RBP31.02■■■□□ 2.56
SNX3-203ENST00000368979 RTF1Q92541 710 aaKnown RBP31.02■■■□□ 2.56
SNX3-203ENST00000368979 CFAP44Q96MT7 982 aa31.02■■■□□ 2.56
SNX3-203ENST00000368979 PKD1L3Q7Z443 1732 aa31■■■□□ 2.55
SNX3-203ENST00000368979 RAPGEF4Q8WZA2 1011 aa30.99■■■□□ 2.55
SNX3-203ENST00000368979 PLCH1Q4KWH8 1693 aa30.99■■■□□ 2.55
SNX3-203ENST00000368979 PARP4Q9UKK3 1724 aaKnown RBP30.98■■■□□ 2.55
SNX3-203ENST00000368979 CT47B1P0C2W7 299 aaPredicted RBP30.98■■■□□ 2.55
SNX3-203ENST00000368979 EXOSC9Q06265 439 aaKnown RBP30.98■■■□□ 2.55
SNX3-203ENST00000368979 TOM1L2Q6ZVM7 507 aa30.98■■■□□ 2.55
SNX3-203ENST00000368979 LAS1LQ9Y4W2 734 aaKnown RBP30.98■■■□□ 2.55
SNX3-203ENST00000368979 TATP17735 454 aaPredicted RBP30.97■■■□□ 2.55
SNX3-203ENST00000368979 MBIPQ9NS73 344 aa30.97■■■□□ 2.55
SNX3-203ENST00000368979 JCADQ9P266 1359 aa30.96■■■□□ 2.55
SNX3-203ENST00000368979 IRX6P78412 446 aaPredicted RBP30.96■■■□□ 2.55
SNX3-203ENST00000368979 AKAP4Q5JQC9 854 aa30.96■■■□□ 2.55
SNX3-203ENST00000368979 ZNF530Q6P9A1 599 aaPredicted RBP30.96■■■□□ 2.55
SNX3-203ENST00000368979 CARD10Q9BWT7 1032 aa30.96■■■□□ 2.55
SNX3-203ENST00000368979 BTG4Q9NY30 223 aa30.96■■■□□ 2.55
SNX3-203ENST00000368979 LARP1Q6PKG0 1096 aaKnown RBP30.94■■■□□ 2.54
SNX3-203ENST00000368979 STRN4Q9NRL3 753 aa30.94■■■□□ 2.54
SNX3-203ENST00000368979 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.94■■■□□ 2.54
SNX3-203ENST00000368979 ADAMTS7Q9UKP4 1686 aa30.94■■■□□ 2.54
SNX3-203ENST00000368979 CEMIPQ8WUJ3 1361 aa30.94■■■□□ 2.54
SNX3-203ENST00000368979 OVOS2A0A0G2JMS6 1433 aa30.94■■■□□ 2.54
SNX3-203ENST00000368979 NRAPQ86VF7 1730 aa30.94■■■□□ 2.54
SNX3-203ENST00000368979 CHL1O00533 1208 aa30.93■■■□□ 2.54
SNX3-203ENST00000368979 EVA1CP58658 441 aa30.93■■■□□ 2.54
SNX3-203ENST00000368979 IL17REQ8NFR9 667 aa30.93■■■□□ 2.54
SNX3-203ENST00000368979 VIRMAQ69YN4 1812 aaKnown RBP30.9■■■□□ 2.54
SNX3-203ENST00000368979 RARSP54136 660 aaKnown RBP30.9■■■□□ 2.54
SNX3-203ENST00000368979 C1orf141Q5JVX7 400 aa30.89■■■□□ 2.54
SNX3-203ENST00000368979 SPG7Q9UQ90 795 aa30.89■■■□□ 2.54
SNX3-203ENST00000368979 NWD2Q9ULI1 1742 aa30.89■■■□□ 2.53
SNX3-203ENST00000368979 ADAMTS2O95450 1211 aa30.88■■■□□ 2.53
SNX3-203ENST00000368979 ERICH6BQ5W0A0 696 aa30.88■■■□□ 2.53
SNX3-203ENST00000368979 BCAR3O75815 825 aa30.88■■■□□ 2.53
SNX3-203ENST00000368979 NUTM2BA6NNL0 878 aaPredicted RBP30.87■■■□□ 2.53
SNX3-203ENST00000368979 NUTM2EB1AL46 878 aaPredicted RBP30.87■■■□□ 2.53
SNX3-203ENST00000368979 NUTM2AQ8IVF1 878 aaPredicted RBP30.87■■■□□ 2.53
SNX3-203ENST00000368979 ILDR2Q71H61 639 aa30.85■■■□□ 2.53
SNX3-203ENST00000368979 SLIT2O94813 1529 aa30.85■■■□□ 2.53
SNX3-203ENST00000368979 PLIN1O60240 522 aa30.84■■■□□ 2.53
SNX3-203ENST00000368979 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.84■■■□□ 2.53
SNX3-203ENST00000368979 LGR6Q9HBX8 967 aa30.84■■■□□ 2.53
SNX3-203ENST00000368979 BABAM1Q9NWV8 329 aa30.84■■■□□ 2.53
SNX3-203ENST00000368979 RNMTO43148 476 aaKnown RBP30.83■■■□□ 2.53
SNX3-203ENST00000368979 IL2RBP14784 551 aa30.83■■■□□ 2.53
SNX3-203ENST00000368979 SHANK3Q9BYB0 1731 aa30.83■■■□□ 2.53
SNX3-203ENST00000368979 SCN11AQ9UI33 1791 aa30.83■■■□□ 2.53
SNX3-203ENST00000368979 PHKG2P15735 406 aa30.83■■■□□ 2.53
SNX3-203ENST00000368979 MPRIPQ6WCQ1 1025 aa30.83■■■□□ 2.53
SNX3-203ENST00000368979 ZNF428Q96B54 188 aa30.83■■■□□ 2.53
SNX3-203ENST00000368979 WNK3Q9BYP7 1800 aa30.82■■■□□ 2.52
SNX3-203ENST00000368979 SPATA31A6Q5VVP1 1343 aa30.82■■■□□ 2.52
SNX3-203ENST00000368979 SIPA1L3O60292 1781 aaPredicted RBP30.82■■■□□ 2.52
SNX3-203ENST00000368979 TSPYL4Q9UJ04 414 aa30.82■■■□□ 2.52
SNX3-203ENST00000368979 TAF7Q15545 349 aaPredicted RBP30.81■■■□□ 2.52
SNX3-203ENST00000368979 TSPYL6Q8N831 410 aa30.81■■■□□ 2.52
SNX3-203ENST00000368979 KDM3BQ7LBC6 1761 aa30.81■■■□□ 2.52
SNX3-203ENST00000368979 DISP2A7MBM2 1401 aa30.81■■■□□ 2.52
SNX3-203ENST00000368979 KDM6AO15550 1401 aaPredicted RBP30.81■■■□□ 2.52
SNX3-203ENST00000368979 VAMP4O75379 141 aa30.8■■■□□ 2.52
SNX3-203ENST00000368979 IFNL2Q8IZJ0 200 aa30.8■■■□□ 2.52
SNX3-203ENST00000368979 C8orf58Q8NAV2 365 aa30.8■■■□□ 2.52
SNX3-203ENST00000368979 HSPA1LP34931 641 aa30.79■■■□□ 2.52
SNX3-203ENST00000368979 MIS18AQ9NYP9 233 aa30.79■■■□□ 2.52
SNX3-203ENST00000368979 LRP6O75581 1613 aa30.79■■■□□ 2.52
SNX3-203ENST00000368979 CYP27B1O15528 508 aa30.78■■■□□ 2.52
SNX3-203ENST00000368979 TWISTNBQ3B726 338 aaPredicted RBP30.78■■■□□ 2.52
SNX3-203ENST00000368979 ALDH1L2Q3SY69 923 aa30.78■■■□□ 2.52
SNX3-203ENST00000368979 ZCRB1Q8TBF4 217 aaKnown RBP30.77■■■□□ 2.52
SNX3-203ENST00000368979 SSH1Q8WYL5 1049 aa30.77■■■□□ 2.52
SNX3-203ENST00000368979 PCDH11XQ9BZA7 1347 aa30.76■■■□□ 2.52
SNX3-203ENST00000368979 PCDH11YQ9BZA8 1340 aa30.76■■■□□ 2.52
SNX3-203ENST00000368979 BCL2L13Q9BXK5 485 aa30.76■■■□□ 2.51
SNX3-203ENST00000368979 MRC1P22897 1456 aa30.76■■■□□ 2.51
SNX3-203ENST00000368979 TEFQ10587 303 aa30.75■■■□□ 2.51
SNX3-203ENST00000368979 USP35Q9P2H5 1018 aa30.75■■■□□ 2.51
SNX3-203ENST00000368979 SMC4Q9NTJ3 1288 aa30.74■■■□□ 2.51
SNX3-203ENST00000368979 HSP90AB1P08238 724 aaKnown RBP30.73■■■□□ 2.51
SNX3-203ENST00000368979 KRT24Q2M2I5 525 aa30.73■■■□□ 2.51
SNX3-203ENST00000368979 C20orf194Q5TEA3 1177 aa30.73■■■□□ 2.51
SNX3-203ENST00000368979 ELL2O00472 640 aaPredicted RBP30.73■■■□□ 2.51
SNX3-203ENST00000368979 BRPF1P55201 1214 aaPredicted RBP30.72■■■□□ 2.51
SNX3-203ENST00000368979 DCAF5Q96JK2 942 aa30.72■■■□□ 2.51
SNX3-203ENST00000368979 SPATA31A1Q5TZJ5 1347 aa30.71■■■□□ 2.51
SNX3-203ENST00000368979 CANXP27824 592 aaKnown RBP30.68■■■□□ 2.5
SNX3-203ENST00000368979 FRAT1Q92837 279 aaPredicted RBP30.68■■■□□ 2.5
SNX3-203ENST00000368979 BCL9LQ86UU0 1499 aa30.68■■■□□ 2.5
SNX3-203ENST00000368979 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.68■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms