RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 IL16Q14005 1332 aa16.1■□□□□ 0.17
TUBE1-202ENST00000368662 RTF1Q92541 710 aaKnown RBP16.09■□□□□ 0.17
TUBE1-202ENST00000368662 NGLY1Q96IV0 654 aa16.09■□□□□ 0.17
TUBE1-202ENST00000368662 LRP6O75581 1613 aa16.09■□□□□ 0.17
TUBE1-202ENST00000368662 GNAT3A8MTJ3 354 aa16.08■□□□□ 0.16
TUBE1-202ENST00000368662 SLFN5Q08AF3 891 aa16.08■□□□□ 0.16
TUBE1-202ENST00000368662 C8orf37Q96NL8 207 aa16.08■□□□□ 0.16
TUBE1-202ENST00000368662 SPG7Q9UQ90 795 aa16.08■□□□□ 0.16
TUBE1-202ENST00000368662 NRAPQ86VF7 1730 aa16.08■□□□□ 0.16
TUBE1-202ENST00000368662 DLG5Q8TDM6 1919 aa16.07■□□□□ 0.16
TUBE1-202ENST00000368662 MEX3CQ5U5Q3 659 aaKnown RBP16.07■□□□□ 0.16
TUBE1-202ENST00000368662 FNBP4Q8N3X1 1017 aaPredicted RBP16.07■□□□□ 0.16
TUBE1-202ENST00000368662 CDCA7LQ96GN5 454 aa16.07■□□□□ 0.16
TUBE1-202ENST00000368662 MAP3K5Q99683 1374 aa16.07■□□□□ 0.16
TUBE1-202ENST00000368662 MEGF6O75095 1541 aa16.07■□□□□ 0.16
TUBE1-202ENST00000368662 IL2RBP14784 551 aa16.07■□□□□ 0.16
TUBE1-202ENST00000368662 UNC5CLQ8IV45 518 aa16.07■□□□□ 0.16
TUBE1-202ENST00000368662 FBXO41Q8TF61 875 aa16.07■□□□□ 0.16
TUBE1-202ENST00000368662 MYH16Q9H6N6 1097 aa16.07■□□□□ 0.16
TUBE1-202ENST00000368662 OVOS2A0A0G2JMS6 1433 aa16.07■□□□□ 0.16
TUBE1-202ENST00000368662 AKAP4Q5JQC9 854 aa16.06■□□□□ 0.16
TUBE1-202ENST00000368662 C1orf141Q5JVX7 400 aa16.06■□□□□ 0.16
TUBE1-202ENST00000368662 THRAP3Q9Y2W1 955 aaKnown RBP16.06■□□□□ 0.16
TUBE1-202ENST00000368662 PARP4Q9UKK3 1724 aaKnown RBP16.06■□□□□ 0.16
TUBE1-202ENST00000368662 ZNF530Q6P9A1 599 aaPredicted RBP16.06■□□□□ 0.16
TUBE1-202ENST00000368662 TRMT2AQ8IZ69 625 aaKnown RBP16.06■□□□□ 0.16
TUBE1-202ENST00000368662 DUSP27Q5VZP5 1158 aa16.04■□□□□ 0.16
TUBE1-202ENST00000368662 CDCA7Q9BWT1 371 aaPredicted RBP16.04■□□□□ 0.16
TUBE1-202ENST00000368662 USP35Q9P2H5 1018 aa16.04■□□□□ 0.16
TUBE1-202ENST00000368662 SPATA31A1Q5TZJ5 1347 aa16.03■□□□□ 0.16
TUBE1-202ENST00000368662 GNAI1P63096 354 aa16.03■□□□□ 0.16
TUBE1-202ENST00000368662 SPINK5Q9NQ38 1064 aaPredicted RBP16.03■□□□□ 0.16
TUBE1-202ENST00000368662 IFT57Q9NWB7 429 aa16.03■□□□□ 0.16
TUBE1-202ENST00000368662 PKD1L3Q7Z443 1732 aa16.03■□□□□ 0.16
TUBE1-202ENST00000368662 BCL9LQ86UU0 1499 aa16.03■□□□□ 0.16
TUBE1-202ENST00000368662 SPATA31A5Q5VU36 1347 aa16.03■□□□□ 0.16
TUBE1-202ENST00000368662 SPATA31A7Q8IWB4 1347 aa16.03■□□□□ 0.16
TUBE1-202ENST00000368662 VPS72Q15906 364 aa16.03■□□□□ 0.16
TUBE1-202ENST00000368662 IFNL2Q8IZJ0 200 aa16.03■□□□□ 0.16
TUBE1-202ENST00000368662 PCDH11XQ9BZA7 1347 aa16.02■□□□□ 0.16
TUBE1-202ENST00000368662 PCDH11YQ9BZA8 1340 aa16.02■□□□□ 0.16
TUBE1-202ENST00000368662 MCM10Q7L590 875 aa16.02■□□□□ 0.16
TUBE1-202ENST00000368662 ZCRB1Q8TBF4 217 aaKnown RBP16.02■□□□□ 0.16
TUBE1-202ENST00000368662 USP21Q9UK80 565 aa16.02■□□□□ 0.16
TUBE1-202ENST00000368662 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.02■□□□□ 0.15
TUBE1-202ENST00000368662 DCTN1Q14203 1278 aa16.01■□□□□ 0.15
TUBE1-202ENST00000368662 CFAP44Q96MT7 982 aa16.01■□□□□ 0.15
TUBE1-202ENST00000368662 DISP2A7MBM2 1401 aa16.01■□□□□ 0.15
TUBE1-202ENST00000368662 HSP90AB1P08238 724 aaKnown RBP16.01■□□□□ 0.15
TUBE1-202ENST00000368662 THUMPD2Q9BTF0 503 aaKnown RBP16.01■□□□□ 0.15
TUBE1-202ENST00000368662 PHKG2P15735 406 aa16■□□□□ 0.15
TUBE1-202ENST00000368662 CCDC9Q9Y3X0 531 aaKnown RBP16■□□□□ 0.15
TUBE1-202ENST00000368662 CEMIPQ8WUJ3 1361 aa16■□□□□ 0.15
TUBE1-202ENST00000368662 ZNF853P0CG23 659 aa16■□□□□ 0.15
TUBE1-202ENST00000368662 BARGINQ6ZT62 677 aa16■□□□□ 0.15
TUBE1-202ENST00000368662 IL17REQ8NFR9 667 aa15.99■□□□□ 0.15
TUBE1-202ENST00000368662 BABAM1Q9NWV8 329 aa15.99■□□□□ 0.15
TUBE1-202ENST00000368662 LRRC37A3O60309 1634 aa15.99■□□□□ 0.15
TUBE1-202ENST00000368662 AFF2P51816 1311 aa15.99■□□□□ 0.15
TUBE1-202ENST00000368662 FANCIQ9NVI1 1328 aa15.99■□□□□ 0.15
TUBE1-202ENST00000368662 CYP27B1O15528 508 aa15.98■□□□□ 0.15
TUBE1-202ENST00000368662 DCAF5Q96JK2 942 aa15.98■□□□□ 0.15
TUBE1-202ENST00000368662 LAS1LQ9Y4W2 734 aaKnown RBP15.98■□□□□ 0.15
TUBE1-202ENST00000368662 RNMTO43148 476 aaKnown RBP15.97■□□□□ 0.15
TUBE1-202ENST00000368662 MPRIPQ6WCQ1 1025 aa15.97■□□□□ 0.15
TUBE1-202ENST00000368662 WNK3Q9BYP7 1800 aa15.97■□□□□ 0.15
TUBE1-202ENST00000368662 CHL1O00533 1208 aa15.97■□□□□ 0.15
TUBE1-202ENST00000368662 CT47B1P0C2W7 299 aaPredicted RBP15.97■□□□□ 0.15
TUBE1-202ENST00000368662 TEFQ10587 303 aa15.97■□□□□ 0.15
TUBE1-202ENST00000368662 EXOC5O00471 708 aa15.96■□□□□ 0.15
TUBE1-202ENST00000368662 TAF7Q15545 349 aaPredicted RBP15.96■□□□□ 0.15
TUBE1-202ENST00000368662 TSR2Q969E8 191 aaKnown RBP15.96■□□□□ 0.15
TUBE1-202ENST00000368662 ADAMTS7Q9UKP4 1686 aa15.96■□□□□ 0.15
TUBE1-202ENST00000368662 LGR6Q9HBX8 967 aa15.95■□□□□ 0.14
TUBE1-202ENST00000368662 MBIPQ9NS73 344 aa15.95■□□□□ 0.14
TUBE1-202ENST00000368662 TRPC5Q9UL62 973 aaPredicted RBP15.95■□□□□ 0.14
TUBE1-202ENST00000368662 TNS2Q63HR2 1409 aa15.95■□□□□ 0.14
TUBE1-202ENST00000368662 NKX1-1Q15270 411 aaPredicted RBP15.95■□□□□ 0.14
TUBE1-202ENST00000368662 RCAN3Q9UKA8 241 aa15.95■□□□□ 0.14
TUBE1-202ENST00000368662 DDB1Q16531 1140 aa15.94■□□□□ 0.14
TUBE1-202ENST00000368662 DDX54Q8TDD1 881 aaKnown RBP15.94■□□□□ 0.14
TUBE1-202ENST00000368662 TSPYL4Q9UJ04 414 aa15.94■□□□□ 0.14
TUBE1-202ENST00000368662 ATRNO75882 1429 aa15.93■□□□□ 0.14
TUBE1-202ENST00000368662 SHANK3Q9BYB0 1731 aa15.93■□□□□ 0.14
TUBE1-202ENST00000368662 KDM6AO15550 1401 aaPredicted RBP15.93■□□□□ 0.14
TUBE1-202ENST00000368662 GJD4Q96KN9 370 aaPredicted RBP15.92■□□□□ 0.14
TUBE1-202ENST00000368662 SCN11AQ9UI33 1791 aa15.92■□□□□ 0.14
TUBE1-202ENST00000368662 EXOSC9Q06265 439 aaKnown RBP15.92■□□□□ 0.14
TUBE1-202ENST00000368662 ZNF428Q96B54 188 aa15.92■□□□□ 0.14
TUBE1-202ENST00000368662 SLC52A2Q9HAB3 445 aa15.92■□□□□ 0.14
TUBE1-202ENST00000368662 ERVV-2B6SEH9 535 aa15.91■□□□□ 0.14
TUBE1-202ENST00000368662 MRC1P22897 1456 aa15.91■□□□□ 0.14
TUBE1-202ENST00000368662 FAM98CQ17RN3 349 aaKnown RBP15.91■□□□□ 0.14
TUBE1-202ENST00000368662 ZNF772Q68DY9 489 aaPredicted RBP15.91■□□□□ 0.14
TUBE1-202ENST00000368662 VIRMAQ69YN4 1812 aaKnown RBP15.9■□□□□ 0.14
TUBE1-202ENST00000368662 BTBD11A6QL63 1104 aa15.9■□□□□ 0.14
TUBE1-202ENST00000368662 SUPT16HQ9Y5B9 1047 aaKnown RBP15.9■□□□□ 0.14
TUBE1-202ENST00000368662 QTRT2Q9H974 415 aaKnown RBP15.89■□□□□ 0.13
TUBE1-202ENST00000368662 CABP4P57796 275 aa15.89■□□□□ 0.13
TUBE1-202ENST00000368662 SOS1Q07889 1333 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms