RNA–Protein interactions for RNA: ENST00000368648.7

EBF3-202, Transcript of early B cell factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EBF3, Length 4,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-202ENST00000368648 ZNF530Q6P9A1 599 aaPredicted RBP12.91□□□□□ -0.34
EBF3-202ENST00000368648 PDILTQ8N807 584 aa12.91□□□□□ -0.34
EBF3-202ENST00000368648 ATAD2Q6PL18 1390 aa12.91□□□□□ -0.34
EBF3-202ENST00000368648 POLR3GO15318 223 aaPredicted RBP12.91□□□□□ -0.34
EBF3-202ENST00000368648 SMC2O95347 1197 aa12.91□□□□□ -0.34
EBF3-202ENST00000368648 GAS2L3Q86XJ1 694 aa12.91□□□□□ -0.34
EBF3-202ENST00000368648 DMRT2Q9Y5R5 561 aa12.91□□□□□ -0.34
EBF3-202ENST00000368648 ERC2O15083 957 aa12.91□□□□□ -0.34
EBF3-202ENST00000368648 PPFIA3O75145 1194 aa12.91□□□□□ -0.34
EBF3-202ENST00000368648 ADCY5O95622 1261 aa12.91□□□□□ -0.34
EBF3-202ENST00000368648 TATP17735 454 aaPredicted RBP12.91□□□□□ -0.34
EBF3-202ENST00000368648 TNRQ92752 1358 aa12.91□□□□□ -0.34
EBF3-202ENST00000368648 KLHL40Q2TBA0 621 aa12.9□□□□□ -0.34
EBF3-202ENST00000368648 GCC1Q96CN9 775 aa12.9□□□□□ -0.34
EBF3-202ENST00000368648 PHF8Q9UPP1 1060 aa12.9□□□□□ -0.34
EBF3-202ENST00000368648 PLEKHH1Q9ULM0 1364 aa12.9□□□□□ -0.34
EBF3-202ENST00000368648 AAMPQ13685 434 aa12.9□□□□□ -0.34
EBF3-202ENST00000368648 A2MP01023 1474 aa12.9□□□□□ -0.34
EBF3-202ENST00000368648 OFD1O75665 1012 aa12.9□□□□□ -0.34
EBF3-202ENST00000368648 PLEKHO1Q53GL0 409 aaPredicted RBP12.9□□□□□ -0.34
EBF3-202ENST00000368648 ZGPATQ8N5A5 531 aaKnown RBP12.9□□□□□ -0.34
EBF3-202ENST00000368648 GPATCH3Q96I76 525 aa12.9□□□□□ -0.34
EBF3-202ENST00000368648 CWC22Q9HCG8 908 aaKnown RBP12.9□□□□□ -0.34
EBF3-202ENST00000368648 FBLN1P23142 703 aa12.89□□□□□ -0.35
EBF3-202ENST00000368648 GPS2Q13227 327 aa12.89□□□□□ -0.35
EBF3-202ENST00000368648 MIS18AQ9NYP9 233 aa12.89□□□□□ -0.35
EBF3-202ENST00000368648 DDX58O95786 925 aaKnown RBP12.89□□□□□ -0.35
EBF3-202ENST00000368648 SLC4A2P04920 1241 aa12.88□□□□□ -0.35
EBF3-202ENST00000368648 CCDC192P0DO97 292 aa12.88□□□□□ -0.35
EBF3-202ENST00000368648 GIMAP6Q6P9H5 292 aa12.88□□□□□ -0.35
EBF3-202ENST00000368648 CCDC73Q6ZRK6 1079 aa12.88□□□□□ -0.35
EBF3-202ENST00000368648 RIC3Q7Z5B4 369 aa12.88□□□□□ -0.35
EBF3-202ENST00000368648 TNMDQ9H2S6 317 aa12.88□□□□□ -0.35
EBF3-202ENST00000368648 NSD3Q9BZ95 1437 aa12.88□□□□□ -0.35
EBF3-202ENST00000368648 ZCCHC11Q5TAX3 1644 aaKnown RBP12.88□□□□□ -0.35
EBF3-202ENST00000368648 DYNC1I1O14576 645 aa12.88□□□□□ -0.35
EBF3-202ENST00000368648 IFIT2P09913 472 aaKnown RBP12.88□□□□□ -0.35
EBF3-202ENST00000368648 RBSNQ9H1K0 784 aa12.88□□□□□ -0.35
EBF3-202ENST00000368648 WASLO00401 505 aaPredicted RBP12.88□□□□□ -0.35
EBF3-202ENST00000368648 IBSPP21815 317 aaPredicted RBP12.88□□□□□ -0.35
EBF3-202ENST00000368648 C16orf71Q8IYS4 520 aaPredicted RBP12.88□□□□□ -0.35
EBF3-202ENST00000368648 TMX1Q9H3N1 280 aa12.88□□□□□ -0.35
EBF3-202ENST00000368648 ZKSCAN5Q9Y2L8 839 aa12.88□□□□□ -0.35
EBF3-202ENST00000368648 NKTRP30414 1462 aaKnown RBP12.88□□□□□ -0.35
EBF3-202ENST00000368648 TPM3P06753 285 aa12.87□□□□□ -0.35
EBF3-202ENST00000368648 WDR63Q8IWG1 891 aa12.87□□□□□ -0.35
EBF3-202ENST00000368648 USHBP1Q8N6Y0 703 aa12.87□□□□□ -0.35
EBF3-202ENST00000368648 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.87□□□□□ -0.35
EBF3-202ENST00000368648 GTF2F1P35269 517 aaKnown RBP eCLIP12.87□□□□□ -0.35
EBF3-202ENST00000368648 TMPOP42166 694 aaKnown RBP12.87□□□□□ -0.35
EBF3-202ENST00000368648 ADCY10Q96PN6 1610 aa12.87□□□□□ -0.35
EBF3-202ENST00000368648 ATP2B1P20020 1258 aa12.87□□□□□ -0.35
EBF3-202ENST00000368648 ARGLU1Q9NWB6 273 aaPredicted RBP12.87□□□□□ -0.35
EBF3-202ENST00000368648 TFIP11Q9UBB9 837 aaKnown RBP12.87□□□□□ -0.35
EBF3-202ENST00000368648 CWC27Q6UX04 472 aaKnown RBP12.86□□□□□ -0.35
EBF3-202ENST00000368648 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.86□□□□□ -0.35
EBF3-202ENST00000368648 WDR33Q9C0J8 1336 aaKnown RBP12.86□□□□□ -0.35
EBF3-202ENST00000368648 DISP3Q9P2K9 1392 aa12.86□□□□□ -0.35
EBF3-202ENST00000368648 NOLC1Q14978 699 aaKnown RBP eCLIP12.86□□□□□ -0.35
EBF3-202ENST00000368648 LARP1BQ659C4 914 aaKnown RBP12.86□□□□□ -0.35
EBF3-202ENST00000368648 RNF123Q5XPI4 1314 aa12.86□□□□□ -0.35
EBF3-202ENST00000368648 TNNT1P13805 278 aa12.86□□□□□ -0.35
EBF3-202ENST00000368648 EMILIN1Q9Y6C2 1016 aa12.86□□□□□ -0.35
EBF3-202ENST00000368648 CCDC83Q8IWF9 413 aa12.85□□□□□ -0.35
EBF3-202ENST00000368648 RASSF8Q8NHQ8 419 aa12.85□□□□□ -0.35
EBF3-202ENST00000368648 C14orf93Q9H972 538 aaKnown RBP12.85□□□□□ -0.35
EBF3-202ENST00000368648 MAGI3Q5TCQ9 1506 aa12.85□□□□□ -0.35
EBF3-202ENST00000368648 ZMYM3Q14202 1370 aa12.85□□□□□ -0.35
EBF3-202ENST00000368648 NUTM1Q86Y26 1132 aa12.85□□□□□ -0.35
EBF3-202ENST00000368648 DDX11Q96FC9 970 aa12.85□□□□□ -0.35
EBF3-202ENST00000368648 KDM2BQ8NHM5 1336 aa12.84□□□□□ -0.35
EBF3-202ENST00000368648 APPP05067 770 aa12.84□□□□□ -0.35
EBF3-202ENST00000368648 RUFY2Q8WXA3 655 aa12.84□□□□□ -0.35
EBF3-202ENST00000368648 NEO1Q92859 1461 aa12.84□□□□□ -0.35
EBF3-202ENST00000368648 F6X3S4 739 aa12.83□□□□□ -0.35
EBF3-202ENST00000368648 CABP4P57796 275 aa12.83□□□□□ -0.35
EBF3-202ENST00000368648 RBM25P49756 843 aaKnown RBP12.83□□□□□ -0.36
EBF3-202ENST00000368648 BRPF1P55201 1214 aaPredicted RBP12.83□□□□□ -0.36
EBF3-202ENST00000368648 HDGFL1Q5TGJ6 251 aa12.83□□□□□ -0.36
EBF3-202ENST00000368648 NCKAP5LQ9HCH0 1330 aa12.83□□□□□ -0.36
EBF3-202ENST00000368648 KINO60870 393 aaKnown RBP12.83□□□□□ -0.36
EBF3-202ENST00000368648 UBTFL1P0CB47 393 aaPredicted RBP12.83□□□□□ -0.36
EBF3-202ENST00000368648 NUP62CLQ9H1M0 184 aa12.83□□□□□ -0.36
EBF3-202ENST00000368648 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.83□□□□□ -0.36
EBF3-202ENST00000368648 ATP10AO60312 1499 aa12.82□□□□□ -0.36
EBF3-202ENST00000368648 CHRNA2Q15822 529 aa12.82□□□□□ -0.36
EBF3-202ENST00000368648 CPLX1O14810 134 aa12.82□□□□□ -0.36
EBF3-202ENST00000368648 U2AF2P26368 475 aaKnown RBP eCLIP12.82□□□□□ -0.36
EBF3-202ENST00000368648 HSP90B2PQ58FF3 399 aa12.82□□□□□ -0.36
EBF3-202ENST00000368648 JAKMIP1Q96N16 626 aaKnown RBP12.82□□□□□ -0.36
EBF3-202ENST00000368648 RAB3GAP1Q15042 981 aa12.82□□□□□ -0.36
EBF3-202ENST00000368648 PPP1R1BQ9UD71 204 aaPredicted RBP12.82□□□□□ -0.36
EBF3-202ENST00000368648 PTCD1O75127 700 aaKnown RBP12.81□□□□□ -0.36
EBF3-202ENST00000368648 LRSAM1Q6UWE0 723 aa12.81□□□□□ -0.36
EBF3-202ENST00000368648 KRT28Q7Z3Y7 464 aa12.81□□□□□ -0.36
EBF3-202ENST00000368648 NGLY1Q96IV0 654 aa12.81□□□□□ -0.36
EBF3-202ENST00000368648 FAM135AQ9P2D6 1515 aa12.81□□□□□ -0.36
EBF3-202ENST00000368648 MCM2P49736 904 aa12.81□□□□□ -0.36
EBF3-202ENST00000368648 KRT85P78386 507 aa12.81□□□□□ -0.36
EBF3-202ENST00000368648 UBAP1LF5GYI3 381 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms