RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 COL3A1P02461 1466 aaPredicted RBP16.93■□□□□ 0.3
EFNA1-201ENST00000368406 RGPD1P0DJD0 1748 aa16.93■□□□□ 0.3
EFNA1-201ENST00000368406 MEGF6O75095 1541 aa16.93■□□□□ 0.3
EFNA1-201ENST00000368406 ZCRB1Q8TBF4 217 aaKnown RBP16.93■□□□□ 0.3
EFNA1-201ENST00000368406 MRS2Q9HD23 443 aa16.93■□□□□ 0.3
EFNA1-201ENST00000368406 NUDCQ9Y266 331 aa16.93■□□□□ 0.3
EFNA1-201ENST00000368406 U2SURPO15042 1029 aaKnown RBP16.92■□□□□ 0.3
EFNA1-201ENST00000368406 TATP17735 454 aaPredicted RBP16.92■□□□□ 0.3
EFNA1-201ENST00000368406 BAG6P46379 1132 aa16.91■□□□□ 0.3
EFNA1-201ENST00000368406 MIER1Q8N108 512 aa16.91■□□□□ 0.3
EFNA1-201ENST00000368406 IGSF1Q8N6C5 1336 aa16.91■□□□□ 0.3
EFNA1-201ENST00000368406 WDR43Q15061 677 aaKnown RBP eCLIP16.9■□□□□ 0.3
EFNA1-201ENST00000368406 PLEKHG2Q9H7P9 1386 aa16.9■□□□□ 0.3
EFNA1-201ENST00000368406 SBF2Q86WG5 1849 aa16.9■□□□□ 0.3
EFNA1-201ENST00000368406 IL13P35225 146 aa16.89■□□□□ 0.29
EFNA1-201ENST00000368406 DEFB132Q7Z7B7 95 aa16.89■□□□□ 0.29
EFNA1-201ENST00000368406 DDX54Q8TDD1 881 aaKnown RBP16.89■□□□□ 0.29
EFNA1-201ENST00000368406 BCL11BQ9C0K0 894 aaPredicted RBP16.89■□□□□ 0.29
EFNA1-201ENST00000368406 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.89■□□□□ 0.29
EFNA1-201ENST00000368406 TNS1Q9HBL0 1735 aaKnown RBP16.89■□□□□ 0.29
EFNA1-201ENST00000368406 APBA3O96018 575 aa16.87■□□□□ 0.29
EFNA1-201ENST00000368406 U2AF1L5P0DN76 240 aaPredicted RBP16.87■□□□□ 0.29
EFNA1-201ENST00000368406 U2AF1Q01081 240 aaKnown RBP eCLIP16.87■□□□□ 0.292e-7■□□□□ 10
EFNA1-201ENST00000368406 PCDH11XQ9BZA7 1347 aa16.86■□□□□ 0.29
EFNA1-201ENST00000368406 PCDH11YQ9BZA8 1340 aa16.86■□□□□ 0.29
EFNA1-201ENST00000368406 SHANK3Q9BYB0 1731 aa16.86■□□□□ 0.29
EFNA1-201ENST00000368406 SPG7Q9UQ90 795 aa16.86■□□□□ 0.29
EFNA1-201ENST00000368406 CCER2I3L3R5 266 aa16.85■□□□□ 0.29
EFNA1-201ENST00000368406 EN1Q05925 392 aaPredicted RBP16.85■□□□□ 0.29
EFNA1-201ENST00000368406 KDRP35968 1356 aa16.84■□□□□ 0.29
EFNA1-201ENST00000368406 PLSCR1O15162 318 aa16.84■□□□□ 0.29
EFNA1-201ENST00000368406 HMOX1P09601 288 aa16.84■□□□□ 0.29
EFNA1-201ENST00000368406 CCDC184Q52MB2 194 aa16.84■□□□□ 0.29
EFNA1-201ENST00000368406 SULT6B1Q6IMI4 303 aa16.84■□□□□ 0.29
EFNA1-201ENST00000368406 CAMKK2Q96RR4 588 aa16.84■□□□□ 0.29
EFNA1-201ENST00000368406 PKD1L3Q7Z443 1732 aa16.84■□□□□ 0.29
EFNA1-201ENST00000368406 CYP27B1O15528 508 aa16.82■□□□□ 0.28
EFNA1-201ENST00000368406 KCNQ2O43526 872 aa16.82■□□□□ 0.28
EFNA1-201ENST00000368406 NEFMP07197 916 aa16.82■□□□□ 0.28
EFNA1-201ENST00000368406 NKX1-1Q15270 411 aaPredicted RBP16.82■□□□□ 0.28
EFNA1-201ENST00000368406 PTF1AQ7RTS3 328 aa16.82■□□□□ 0.28
EFNA1-201ENST00000368406 KAT6BQ8WYB5 2073 aa16.82■□□□□ 0.28
EFNA1-201ENST00000368406 NHSQ6T4R5 1651 aa16.82■□□□□ 0.28
EFNA1-201ENST00000368406 AMOTQ4VCS5 1084 aa16.81■□□□□ 0.28
EFNA1-201ENST00000368406 AEBP1Q8IUX7 1158 aa16.81■□□□□ 0.28
EFNA1-201ENST00000368406 ACSBG1Q96GR2 724 aa16.81■□□□□ 0.28
EFNA1-201ENST00000368406 EZH2Q15910 746 aaKnown RBP16.8■□□□□ 0.28
EFNA1-201ENST00000368406 PLEKHO1Q53GL0 409 aaPredicted RBP16.8■□□□□ 0.28
EFNA1-201ENST00000368406 FAM9BQ8IZU0 186 aa16.8■□□□□ 0.28
EFNA1-201ENST00000368406 RGPD3A6NKT7 1758 aaPredicted RBP16.8■□□□□ 0.28
EFNA1-201ENST00000368406 RGPD4Q7Z3J3 1758 aa16.8■□□□□ 0.28
EFNA1-201ENST00000368406 IFNL2Q8IZJ0 200 aa16.79■□□□□ 0.28
EFNA1-201ENST00000368406 PNNQ9H307 717 aaKnown RBP16.79■□□□□ 0.28
EFNA1-201ENST00000368406 MAPK8IP3Q9UPT6 1336 aa16.79■□□□□ 0.28
EFNA1-201ENST00000368406 PRIM1P49642 420 aaKnown RBP16.79■□□□□ 0.28
EFNA1-201ENST00000368406 PHKG2P15735 406 aa16.78■□□□□ 0.28
EFNA1-201ENST00000368406 PRKAR2BP31323 418 aa16.78■□□□□ 0.28
EFNA1-201ENST00000368406 ADAMTS8Q9UP79 889 aa16.77■□□□□ 0.27
EFNA1-201ENST00000368406 FCHSD2O94868 740 aa16.76■□□□□ 0.27
EFNA1-201ENST00000368406 HSP90AB1P08238 724 aaKnown RBP16.76■□□□□ 0.27
EFNA1-201ENST00000368406 PNISRQ8TF01 805 aaKnown RBP16.76■□□□□ 0.27
EFNA1-201ENST00000368406 SYTL4Q96C24 671 aaPredicted RBP16.76■□□□□ 0.27
EFNA1-201ENST00000368406 RSPH6AQ9H0K4 717 aa16.76■□□□□ 0.27
EFNA1-201ENST00000368406 BTAF1O14981 1849 aa16.75■□□□□ 0.27
EFNA1-201ENST00000368406 DOT1LQ8TEK3 1739 aa16.75■□□□□ 0.27
EFNA1-201ENST00000368406 CCDC146Q8IYE0 955 aa16.75■□□□□ 0.27
EFNA1-201ENST00000368406 PROM2Q8N271 834 aa16.75■□□□□ 0.27
EFNA1-201ENST00000368406 RREB1Q92766 1687 aa16.75■□□□□ 0.27
EFNA1-201ENST00000368406 ZNF530Q6P9A1 599 aaPredicted RBP16.74■□□□□ 0.27
EFNA1-201ENST00000368406 TXNRD1Q16881 649 aa16.73■□□□□ 0.27
EFNA1-201ENST00000368406 DCAF5Q96JK2 942 aa16.73■□□□□ 0.27
EFNA1-201ENST00000368406 C1orf141Q5JVX7 400 aa16.72■□□□□ 0.27
EFNA1-201ENST00000368406 ERVV-2B6SEH9 535 aa16.71■□□□□ 0.27
EFNA1-201ENST00000368406 NBPF14Q5TI25 921 aa16.71■□□□□ 0.27
EFNA1-201ENST00000368406 RUNDC1Q96C34 613 aa16.71■□□□□ 0.27
EFNA1-201ENST00000368406 SRCAPQ6ZRS2 3230 aa16.71■□□□□ 0.27
EFNA1-201ENST00000368406 NUP188Q5SRE5 1749 aa16.71■□□□□ 0.26
EFNA1-201ENST00000368406 TOGARAM1Q9Y4F4 1720 aa16.71■□□□□ 0.26
EFNA1-201ENST00000368406 AKAP4Q5JQC9 854 aa16.7■□□□□ 0.26
EFNA1-201ENST00000368406 SLC27A3Q5K4L6 730 aa16.7■□□□□ 0.26
EFNA1-201ENST00000368406 MPRIPQ6WCQ1 1025 aa16.7■□□□□ 0.26
EFNA1-201ENST00000368406 ITGB4P16144 1822 aa16.7■□□□□ 0.26
EFNA1-201ENST00000368406 GAS2L2Q8NHY3 880 aa16.7■□□□□ 0.26
EFNA1-201ENST00000368406 PIGBQ92521 554 aa16.7■□□□□ 0.26
EFNA1-201ENST00000368406 MTHFSDQ2M296 383 aaKnown RBP16.69■□□□□ 0.26
EFNA1-201ENST00000368406 TMOD3Q9NYL9 352 aa16.69■□□□□ 0.26
EFNA1-201ENST00000368406 SMARCC1Q92922 1105 aaPredicted RBP16.68■□□□□ 0.26
EFNA1-201ENST00000368406 PHACTR3Q96KR7 559 aa16.68■□□□□ 0.26
EFNA1-201ENST00000368406 KDM6AO15550 1401 aaPredicted RBP16.68■□□□□ 0.26
EFNA1-201ENST00000368406 HMGB2P26583 209 aaKnown RBP16.67■□□□□ 0.26
EFNA1-201ENST00000368406 PLEKHF1Q96S99 279 aa16.67■□□□□ 0.26
EFNA1-201ENST00000368406 NEUROD2Q15784 382 aa16.66■□□□□ 0.26
EFNA1-201ENST00000368406 LY75O60449 1722 aa16.66■□□□□ 0.26
EFNA1-201ENST00000368406 DLG5Q8TDM6 1919 aa16.66■□□□□ 0.26
EFNA1-201ENST00000368406 MAP3K5Q99683 1374 aa16.65■□□□□ 0.26
EFNA1-201ENST00000368406 CABP4P57796 275 aa16.65■□□□□ 0.26
EFNA1-201ENST00000368406 R3HDM1Q15032 1099 aaKnown RBP16.65■□□□□ 0.26
EFNA1-201ENST00000368406 NFE2L2Q16236 605 aa16.65■□□□□ 0.26
EFNA1-201ENST00000368406 LRRC4BQ9NT99 713 aa16.65■□□□□ 0.26
EFNA1-201ENST00000368406 RRP7AQ9Y3A4 280 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms