RNA–Protein interactions for RNA: ENST00000368209.9

HDGF-203, Transcript of heparin binding growth factor, humanhuman

TSL 2 BASIC

Gene HDGF, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-203ENST00000368209 SSH1Q8WYL5 1049 aa17.23■□□□□ 0.35
HDGF-203ENST00000368209 TNNQ9UQP3 1299 aa17.22■□□□□ 0.35
HDGF-203ENST00000368209 ERBB3P21860 1342 aa17.22■□□□□ 0.35
HDGF-203ENST00000368209 CPDO75976 1380 aa17.22■□□□□ 0.35
HDGF-203ENST00000368209 CHL1O00533 1208 aa17.22■□□□□ 0.35
HDGF-203ENST00000368209 TSPYL6Q8N831 410 aa17.22■□□□□ 0.35
HDGF-203ENST00000368209 ABCA3Q99758 1704 aa17.21■□□□□ 0.35
HDGF-203ENST00000368209 VAMP4O75379 141 aa17.21■□□□□ 0.35
HDGF-203ENST00000368209 FAM208AQ9UK61 1670 aaKnown RBP17.2■□□□□ 0.34
HDGF-203ENST00000368209 HTATSF1O43719 755 aaKnown RBP17.2■□□□□ 0.34
HDGF-203ENST00000368209 RLBP1P12271 317 aa17.2■□□□□ 0.34
HDGF-203ENST00000368209 C8orf58Q8NAV2 365 aa17.19■□□□□ 0.34
HDGF-203ENST00000368209 MAP3K5Q99683 1374 aa17.19■□□□□ 0.34
HDGF-203ENST00000368209 PANK1Q8TE04 598 aa17.19■□□□□ 0.34
HDGF-203ENST00000368209 FRAT1Q92837 279 aaPredicted RBP17.19■□□□□ 0.34
HDGF-203ENST00000368209 KIAA0232Q92628 1395 aa17.18■□□□□ 0.34
HDGF-203ENST00000368209 BRPF1P55201 1214 aaPredicted RBP17.18■□□□□ 0.34
HDGF-203ENST00000368209 ALDH1L2Q3SY69 923 aa17.18■□□□□ 0.34
HDGF-203ENST00000368209 ZNF428Q96B54 188 aa17.18■□□□□ 0.34
HDGF-203ENST00000368209 SMC4Q9NTJ3 1288 aa17.18■□□□□ 0.34
HDGF-203ENST00000368209 GNAT3A8MTJ3 354 aa17.18■□□□□ 0.34
HDGF-203ENST00000368209 IL17REQ8NFR9 667 aa17.17■□□□□ 0.34
HDGF-203ENST00000368209 CEMIPQ8WUJ3 1361 aa17.16■□□□□ 0.34
HDGF-203ENST00000368209 ROBO1Q9Y6N7 1651 aa17.15■□□□□ 0.34
HDGF-203ENST00000368209 CHRNA2Q15822 529 aa17.15■□□□□ 0.34
HDGF-203ENST00000368209 RTF1Q92541 710 aaKnown RBP17.15■□□□□ 0.34
HDGF-203ENST00000368209 CANXP27824 592 aaKnown RBP17.15■□□□□ 0.34
HDGF-203ENST00000368209 KRT24Q2M2I5 525 aa17.15■□□□□ 0.34
HDGF-203ENST00000368209 TWISTNBQ3B726 338 aaPredicted RBP17.15■□□□□ 0.34
HDGF-203ENST00000368209 COG6Q9Y2V7 657 aa17.15■□□□□ 0.34
HDGF-203ENST00000368209 TRIM27P14373 513 aa17.14■□□□□ 0.33
HDGF-203ENST00000368209 ZKSCAN2Q63HK3 967 aa17.14■□□□□ 0.33
HDGF-203ENST00000368209 ELL2O00472 640 aaPredicted RBP17.13■□□□□ 0.33
HDGF-203ENST00000368209 MRPL50Q8N5N7 158 aaKnown RBP17.13■□□□□ 0.33
HDGF-203ENST00000368209 NOB1Q9ULX3 412 aaKnown RBP17.13■□□□□ 0.33
HDGF-203ENST00000368209 AHDC1Q5TGY3 1603 aaPredicted RBP17.13■□□□□ 0.33
HDGF-203ENST00000368209 KDM2BQ8NHM5 1336 aa17.13■□□□□ 0.33
HDGF-203ENST00000368209 MIS18AQ9NYP9 233 aa17.13■□□□□ 0.33
HDGF-203ENST00000368209 ATF7IPQ6VMQ6 1270 aa17.12■□□□□ 0.33
HDGF-203ENST00000368209 ADAMTS7Q9UKP4 1686 aa17.12■□□□□ 0.33
HDGF-203ENST00000368209 KIF16BQ96L93 1317 aa17.12■□□□□ 0.33
HDGF-203ENST00000368209 VIRMAQ69YN4 1812 aaKnown RBP17.12■□□□□ 0.33
HDGF-203ENST00000368209 CLUAP1Q96AJ1 413 aa17.12■□□□□ 0.33
HDGF-203ENST00000368209 TSHZ2Q9NRE2 1034 aa17.12■□□□□ 0.33
HDGF-203ENST00000368209 AMOTQ4VCS5 1084 aa17.11■□□□□ 0.33
HDGF-203ENST00000368209 DZIP1LQ8IYY4 767 aaKnown RBP17.11■□□□□ 0.33
HDGF-203ENST00000368209 MEGF6O75095 1541 aa17.1■□□□□ 0.33
HDGF-203ENST00000368209 PLEKHO1Q53GL0 409 aaPredicted RBP17.1■□□□□ 0.33
HDGF-203ENST00000368209 AKAP4Q5JQC9 854 aa17.1■□□□□ 0.33
HDGF-203ENST00000368209 TSPYL4Q9UJ04 414 aa17.1■□□□□ 0.33
HDGF-203ENST00000368209 LGR6Q9HBX8 967 aa17.09■□□□□ 0.33
HDGF-203ENST00000368209 MVPQ14764 893 aaKnown RBP17.09■□□□□ 0.33
HDGF-203ENST00000368209 ZNF530Q6P9A1 599 aaPredicted RBP17.09■□□□□ 0.33
HDGF-203ENST00000368209 KDM3BQ7LBC6 1761 aa17.08■□□□□ 0.33
HDGF-203ENST00000368209 BABAM1Q9NWV8 329 aa17.08■□□□□ 0.33
HDGF-203ENST00000368209 NLRP2Q9NX02 1062 aa17.08■□□□□ 0.33
HDGF-203ENST00000368209 COL5A2P05997 1499 aaPredicted RBP17.08■□□□□ 0.33
HDGF-203ENST00000368209 PLEKHG2Q9H7P9 1386 aa17.08■□□□□ 0.32
HDGF-203ENST00000368209 OVOS2A0A0G2JMS6 1433 aa17.08■□□□□ 0.32
HDGF-203ENST00000368209 TCERG1O14776 1098 aaKnown RBP17.08■□□□□ 0.32
HDGF-203ENST00000368209 PKD1L3Q7Z443 1732 aa17.08■□□□□ 0.32
HDGF-203ENST00000368209 COL22A1Q8NFW1 1626 aaPredicted RBP17.07■□□□□ 0.32
HDGF-203ENST00000368209 TAF7Q15545 349 aaPredicted RBP17.07■□□□□ 0.32
HDGF-203ENST00000368209 ARHGAP45Q92619 1136 aa17.07■□□□□ 0.32
HDGF-203ENST00000368209 PRDM11Q9NQV5 511 aa17.07■□□□□ 0.32
HDGF-203ENST00000368209 SIPA1L3O60292 1781 aaPredicted RBP17.07■□□□□ 0.32
HDGF-203ENST00000368209 IPO8O15397 1037 aaKnown RBP17.06■□□□□ 0.32
HDGF-203ENST00000368209 MS4A1P11836 297 aa17.06■□□□□ 0.32
HDGF-203ENST00000368209 AAMPQ13685 434 aa17.05■□□□□ 0.32
HDGF-203ENST00000368209 FTSJ3Q8IY81 847 aaKnown RBP17.05■□□□□ 0.32
HDGF-203ENST00000368209 TMEM57Q8N5G2 664 aa17.05■□□□□ 0.32
HDGF-203ENST00000368209 WDR17Q8IZU2 1322 aa17.05■□□□□ 0.32
HDGF-203ENST00000368209 RNMTO43148 476 aaKnown RBP17.05■□□□□ 0.32
HDGF-203ENST00000368209 RGS12O14924 1447 aa17.05■□□□□ 0.32
HDGF-203ENST00000368209 CSB-PGBD3P0DP91 1061 aa17.04■□□□□ 0.32
HDGF-203ENST00000368209 MPRIPQ6WCQ1 1025 aa17.04■□□□□ 0.32
HDGF-203ENST00000368209 ABCC4O15439 1325 aa17.04■□□□□ 0.32
HDGF-203ENST00000368209 CENPQQ7L2Z9 268 aaPredicted RBP17.04■□□□□ 0.32
HDGF-203ENST00000368209 RAPGEF4Q8WZA2 1011 aa17.04■□□□□ 0.32
HDGF-203ENST00000368209 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.04■□□□□ 0.32
HDGF-203ENST00000368209 PCDHB15Q9Y5E8 787 aa17.04■□□□□ 0.32
HDGF-203ENST00000368209 COL16A1Q07092 1604 aaPredicted RBP17.03■□□□□ 0.32
HDGF-203ENST00000368209 IGHDP01880 384 aa17.03■□□□□ 0.32
HDGF-203ENST00000368209 SCN11AQ9UI33 1791 aa17.03■□□□□ 0.32
HDGF-203ENST00000368209 KDM6AO15550 1401 aaPredicted RBP17.03■□□□□ 0.32
HDGF-203ENST00000368209 C1orf141Q5JVX7 400 aa17.02■□□□□ 0.32
HDGF-203ENST00000368209 TATP17735 454 aaPredicted RBP17.02■□□□□ 0.31
HDGF-203ENST00000368209 HAP1P54257 671 aaPredicted RBP17.02■□□□□ 0.31
HDGF-203ENST00000368209 DDX19BQ9UMR2 479 aa17.01■□□□□ 0.31
HDGF-203ENST00000368209 PARP4Q9UKK3 1724 aaKnown RBP17■□□□□ 0.31
HDGF-203ENST00000368209 PHKG2P15735 406 aa17■□□□□ 0.31
HDGF-203ENST00000368209 SKAP1Q86WV1 359 aa17■□□□□ 0.31
HDGF-203ENST00000368209 ITPRIPQ8IWB1 547 aa17■□□□□ 0.31
HDGF-203ENST00000368209 SOS1Q07889 1333 aaPredicted RBP17■□□□□ 0.31
HDGF-203ENST00000368209 CYP27B1O15528 508 aa16.99■□□□□ 0.31
HDGF-203ENST00000368209 KCNQ3O43525 872 aa16.99■□□□□ 0.31
HDGF-203ENST00000368209 EIF4A1P60842 406 aaKnown RBP16.99■□□□□ 0.31
HDGF-203ENST00000368209 ANP32EQ9BTT0 268 aa16.99■□□□□ 0.31
HDGF-203ENST00000368209 ZBTB40Q9NUA8 1239 aa16.99■□□□□ 0.31
HDGF-203ENST00000368209 PHLPP1O60346 1717 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms