RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 FLT4P35916 1363 aa20.11■□□□□ 0.81
SF3B5-201ENST00000367569 USHBP1Q8N6Y0 703 aa20.11■□□□□ 0.81
SF3B5-201ENST00000367569 PPP1R1BQ9UD71 204 aaPredicted RBP20.11■□□□□ 0.81
SF3B5-201ENST00000367569 HSP90AB2PQ58FF8 381 aa20.1■□□□□ 0.81
SF3B5-201ENST00000367569 KNSTRNQ9Y448 316 aa20.1■□□□□ 0.81
SF3B5-201ENST00000367569 SLC15A2Q16348 729 aa20.09■□□□□ 0.81
SF3B5-201ENST00000367569 STK32BQ9NY57 414 aa20.09■□□□□ 0.81
SF3B5-201ENST00000367569 SMG6Q86US8 1419 aaKnown RBP20.09■□□□□ 0.81
SF3B5-201ENST00000367569 BTAF1O14981 1849 aa20.09■□□□□ 0.81
SF3B5-201ENST00000367569 NSD2O96028 1365 aa20.08■□□□□ 0.81
SF3B5-201ENST00000367569 MEGF6O75095 1541 aa20.08■□□□□ 0.81
SF3B5-201ENST00000367569 ZBTB7AO95365 584 aa20.08■□□□□ 0.81
SF3B5-201ENST00000367569 CC2D1BQ5T0F9 858 aaKnown RBP20.07■□□□□ 0.8
SF3B5-201ENST00000367569 DDX54Q8TDD1 881 aaKnown RBP20.07■□□□□ 0.8
SF3B5-201ENST00000367569 INSRP06213 1382 aa20.07■□□□□ 0.8
SF3B5-201ENST00000367569 MORC1Q86VD1 984 aa20.06■□□□□ 0.8
SF3B5-201ENST00000367569 AMER1Q5JTC6 1135 aaPredicted RBP20.05■□□□□ 0.8
SF3B5-201ENST00000367569 PTGER2P43116 358 aa20.04■□□□□ 0.8
SF3B5-201ENST00000367569 POLKQ9UBT6 870 aa20.04■□□□□ 0.8
SF3B5-201ENST00000367569 ATF5Q9Y2D1 282 aaPredicted RBP20.04■□□□□ 0.8
SF3B5-201ENST00000367569 DOT1LQ8TEK3 1739 aa20.04■□□□□ 0.8
SF3B5-201ENST00000367569 NBPF6Q5VWK0 638 aa20.03■□□□□ 0.8
SF3B5-201ENST00000367569 NBPF4Q96M43 638 aa20.03■□□□□ 0.8
SF3B5-201ENST00000367569 PAPPAQ13219 1627 aa20.02■□□□□ 0.8
SF3B5-201ENST00000367569 LRRC4BQ9NT99 713 aa20.02■□□□□ 0.8
SF3B5-201ENST00000367569 KIF24Q5T7B8 1368 aa20.01■□□□□ 0.79
SF3B5-201ENST00000367569 PER1O15534 1290 aaPredicted RBP20■□□□□ 0.79
SF3B5-201ENST00000367569 ZCRB1Q8TBF4 217 aaKnown RBP20■□□□□ 0.79
SF3B5-201ENST00000367569 PKD1L3Q7Z443 1732 aa19.99■□□□□ 0.79
SF3B5-201ENST00000367569 PRIM1P49642 420 aaKnown RBP19.99■□□□□ 0.79
SF3B5-201ENST00000367569 ZNF827Q17R98 1081 aa19.99■□□□□ 0.79
SF3B5-201ENST00000367569 MTFR1LQ9H019 292 aa19.99■□□□□ 0.79
SF3B5-201ENST00000367569 SYTL4Q96C24 671 aaPredicted RBP19.98■□□□□ 0.79
SF3B5-201ENST00000367569 EIF4A2Q14240 407 aaKnown RBP19.97■□□□□ 0.79
SF3B5-201ENST00000367569 SGIP1Q9BQI5 828 aa19.97■□□□□ 0.79
SF3B5-201ENST00000367569 TOGARAM1Q9Y4F4 1720 aa19.96■□□□□ 0.79
SF3B5-201ENST00000367569 KCNQ4P56696 695 aa19.95■□□□□ 0.78
SF3B5-201ENST00000367569 SLC27A3Q5K4L6 730 aa19.95■□□□□ 0.78
SF3B5-201ENST00000367569 AKT1S1Q96B36 256 aa19.95■□□□□ 0.78
SF3B5-201ENST00000367569 DCAF8L1A6NGE4 600 aa19.94■□□□□ 0.78
SF3B5-201ENST00000367569 YY1P25490 414 aa19.94■□□□□ 0.78
SF3B5-201ENST00000367569 UTRNP46939 3433 aa19.94■□□□□ 0.78
SF3B5-201ENST00000367569 NCAPD2Q15021 1401 aa19.93■□□□□ 0.78
SF3B5-201ENST00000367569 RAPGEF4Q8WZA2 1011 aa19.93■□□□□ 0.78
SF3B5-201ENST00000367569 EYA1Q99502 592 aa19.93■□□□□ 0.78
SF3B5-201ENST00000367569 SYT17Q9BSW7 474 aa19.93■□□□□ 0.78
SF3B5-201ENST00000367569 FHDC1Q9C0D6 1143 aaPredicted RBP19.93■□□□□ 0.78
SF3B5-201ENST00000367569 TATP17735 454 aaPredicted RBP19.92■□□□□ 0.78
SF3B5-201ENST00000367569 LY75O60449 1722 aa19.91■□□□□ 0.78
SF3B5-201ENST00000367569 COL3A1P02461 1466 aaPredicted RBP19.9■□□□□ 0.78
SF3B5-201ENST00000367569 MTHFSP49914 203 aa19.89■□□□□ 0.77
SF3B5-201ENST00000367569 QSER1Q2KHR3 1735 aa19.89■□□□□ 0.77
SF3B5-201ENST00000367569 PNPLA7Q6ZV29 1317 aa19.89■□□□□ 0.77
SF3B5-201ENST00000367569 ARXQ96QS3 562 aa19.89■□□□□ 0.77
SF3B5-201ENST00000367569 NPC1L1Q9UHC9 1359 aa19.89■□□□□ 0.77
SF3B5-201ENST00000367569 ITGB4P16144 1822 aa19.88■□□□□ 0.77
SF3B5-201ENST00000367569 TUBGCP6Q96RT7 1819 aa19.88■□□□□ 0.77
SF3B5-201ENST00000367569 AEBP1Q8IUX7 1158 aa19.88■□□□□ 0.77
SF3B5-201ENST00000367569 IGSF1Q8N6C5 1336 aa19.87■□□□□ 0.77
SF3B5-201ENST00000367569 ZEB1P37275 1124 aaPredicted RBP19.87■□□□□ 0.77
SF3B5-201ENST00000367569 TFCP2L1Q9NZI6 479 aa19.87■□□□□ 0.77
SF3B5-201ENST00000367569 CCNL1Q9UK58 526 aaPredicted RBP19.87■□□□□ 0.77
SF3B5-201ENST00000367569 PCDH11XQ9BZA7 1347 aa19.86■□□□□ 0.77
SF3B5-201ENST00000367569 PCDH11YQ9BZA8 1340 aa19.86■□□□□ 0.77
SF3B5-201ENST00000367569 SLC16A10Q8TF71 515 aa19.86■□□□□ 0.77
SF3B5-201ENST00000367569 CYP27B1O15528 508 aa19.85■□□□□ 0.77
SF3B5-201ENST00000367569 DDX10Q13206 875 aaKnown RBP19.85■□□□□ 0.77
SF3B5-201ENST00000367569 VIRMAQ69YN4 1812 aaKnown RBP19.84■□□□□ 0.77
SF3B5-201ENST00000367569 COL24A1Q17RW2 1714 aa19.83■□□□□ 0.77
SF3B5-201ENST00000367569 IL13P35225 146 aa19.83■□□□□ 0.77
SF3B5-201ENST00000367569 MAP3K5Q99683 1374 aa19.83■□□□□ 0.76
SF3B5-201ENST00000367569 MPRIPQ6WCQ1 1025 aa19.82■□□□□ 0.76
SF3B5-201ENST00000367569 HMOX1P09601 288 aa19.81■□□□□ 0.76
SF3B5-201ENST00000367569 SULT6B1Q6IMI4 303 aa19.81■□□□□ 0.76
SF3B5-201ENST00000367569 POLD1P28340 1107 aa19.8■□□□□ 0.76
SF3B5-201ENST00000367569 PPP2R1AP30153 589 aa19.79■□□□□ 0.76
SF3B5-201ENST00000367569 COL23A1Q86Y22 540 aaPredicted RBP19.79■□□□□ 0.76
SF3B5-201ENST00000367569 PALLDQ8WX93 1383 aa19.79■□□□□ 0.76
SF3B5-201ENST00000367569 C5P01031 1676 aa19.78■□□□□ 0.76
SF3B5-201ENST00000367569 DIAPH1O60610 1272 aaKnown RBP19.78■□□□□ 0.76
SF3B5-201ENST00000367569 KLHL34Q8N239 644 aa19.78■□□□□ 0.76
SF3B5-201ENST00000367569 TAF1LQ8IZX4 1826 aa19.77■□□□□ 0.76
SF3B5-201ENST00000367569 U2SURPO15042 1029 aaKnown RBP19.77■□□□□ 0.76
SF3B5-201ENST00000367569 MSH5O43196 834 aa19.77■□□□□ 0.76
SF3B5-201ENST00000367569 NKX1-1Q15270 411 aaPredicted RBP19.77■□□□□ 0.76
SF3B5-201ENST00000367569 SPG7Q9UQ90 795 aa19.77■□□□□ 0.76
SF3B5-201ENST00000367569 KDRP35968 1356 aa19.76■□□□□ 0.75
SF3B5-201ENST00000367569 PIGBQ92521 554 aa19.76■□□□□ 0.75
SF3B5-201ENST00000367569 CHD4Q14839 1912 aa19.74■□□□□ 0.75
SF3B5-201ENST00000367569 PHKG2P15735 406 aa19.74■□□□□ 0.75
SF3B5-201ENST00000367569 ZNF530Q6P9A1 599 aaPredicted RBP19.74■□□□□ 0.75
SF3B5-201ENST00000367569 SMARCC1Q92922 1105 aaPredicted RBP19.74■□□□□ 0.75
SF3B5-201ENST00000367569 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.74■□□□□ 0.75
SF3B5-201ENST00000367569 SCN11AQ9UI33 1791 aa19.74■□□□□ 0.75
SF3B5-201ENST00000367569 KDM6AO15550 1401 aaPredicted RBP19.74■□□□□ 0.75
SF3B5-201ENST00000367569 GOLGB1Q14789 3259 aaKnown RBP19.73■□□□□ 0.75
SF3B5-201ENST00000367569 MSL1Q68DK7 614 aa19.73■□□□□ 0.75
SF3B5-201ENST00000367569 NLGN2Q8NFZ4 835 aa19.73■□□□□ 0.75
SF3B5-201ENST00000367569 GPR162Q16538 588 aa19.72■□□□□ 0.75
SF3B5-201ENST00000367569 ZNF784Q8NCA9 323 aaPredicted RBP19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms