RNA–Protein interactions for RNA: ENST00000367538.1

SMG7-203, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG7, Length 328 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-203ENST00000367538 DOT1LQ8TEK3 1739 aa26.07■■□□□ 1.76
SMG7-203ENST00000367538 PNPLA7Q6ZV29 1317 aa26.07■■□□□ 1.76
SMG7-203ENST00000367538 LY75O60449 1722 aa26.06■■□□□ 1.76
SMG7-203ENST00000367538 PRIM1P49642 420 aaKnown RBP26.06■■□□□ 1.76
SMG7-203ENST00000367538 SYTL4Q96C24 671 aaPredicted RBP26.06■■□□□ 1.76
SMG7-203ENST00000367538 TFCP2L1Q9NZI6 479 aa26.06■■□□□ 1.76
SMG7-203ENST00000367538 NSD2O96028 1365 aa26.05■■□□□ 1.76
SMG7-203ENST00000367538 MEGF6O75095 1541 aa26.04■■□□□ 1.76
SMG7-203ENST00000367538 SHANK3Q9BYB0 1731 aa26.04■■□□□ 1.76
SMG7-203ENST00000367538 SMG6Q86US8 1419 aaKnown RBP26.04■■□□□ 1.76
SMG7-203ENST00000367538 HMGB2P26583 209 aaKnown RBP26.03■■□□□ 1.76
SMG7-203ENST00000367538 GPR162Q16538 588 aa26.01■■□□□ 1.75
SMG7-203ENST00000367538 TUBGCP6Q96RT7 1819 aa26.01■■□□□ 1.75
SMG7-203ENST00000367538 RGPD2P0DJD1 1756 aa26■■□□□ 1.75
SMG7-203ENST00000367538 CCNL1Q9UK58 526 aaPredicted RBP26■■□□□ 1.75
SMG7-203ENST00000367538 KIF24Q5T7B8 1368 aa25.99■■□□□ 1.75
SMG7-203ENST00000367538 USP47Q96K76 1375 aa25.99■■□□□ 1.75
SMG7-203ENST00000367538 TMF1P82094 1093 aa25.99■■□□□ 1.75
SMG7-203ENST00000367538 RAPGEF4Q8WZA2 1011 aa25.99■■□□□ 1.75
SMG7-203ENST00000367538 FYB1O15117 783 aa25.98■■□□□ 1.75
SMG7-203ENST00000367538 NBPF6Q5VWK0 638 aa25.98■■□□□ 1.75
SMG7-203ENST00000367538 NBPF4Q96M43 638 aa25.98■■□□□ 1.75
SMG7-203ENST00000367538 FBLN1P23142 703 aa25.97■■□□□ 1.75
SMG7-203ENST00000367538 RRS1Q15050 365 aaKnown RBP25.96■■□□□ 1.75
SMG7-203ENST00000367538 INSRP06213 1382 aa25.95■■□□□ 1.75
SMG7-203ENST00000367538 KCNQ4P56696 695 aa25.95■■□□□ 1.74
SMG7-203ENST00000367538 CDCA8Q53HL2 280 aa25.95■■□□□ 1.74
SMG7-203ENST00000367538 KLHL34Q8N239 644 aa25.95■■□□□ 1.74
SMG7-203ENST00000367538 PCDH11XQ9BZA7 1347 aa25.94■■□□□ 1.74
SMG7-203ENST00000367538 PCDH11YQ9BZA8 1340 aa25.94■■□□□ 1.74
SMG7-203ENST00000367538 TATP17735 454 aaPredicted RBP25.94■■□□□ 1.74
SMG7-203ENST00000367538 GGNBP2Q9H3C7 697 aa25.94■■□□□ 1.74
SMG7-203ENST00000367538 FLT4P35916 1363 aa25.94■■□□□ 1.74
SMG7-203ENST00000367538 C1QTNF8P60827 252 aa25.91■■□□□ 1.74
SMG7-203ENST00000367538 USHBP1Q8N6Y0 703 aa25.9■■□□□ 1.74
SMG7-203ENST00000367538 KIF20BQ96Q89 1820 aa25.9■■□□□ 1.74
SMG7-203ENST00000367538 GOLGB1Q14789 3259 aaKnown RBP25.9■■□□□ 1.74
SMG7-203ENST00000367538 GRIN3BO60391 1043 aa25.89■■□□□ 1.74
SMG7-203ENST00000367538 COL23A1Q86Y22 540 aaPredicted RBP25.89■■□□□ 1.74
SMG7-203ENST00000367538 FLAD1Q8NFF5 587 aa25.89■■□□□ 1.74
SMG7-203ENST00000367538 C5P01031 1676 aa25.88■■□□□ 1.73
SMG7-203ENST00000367538 MSH5O43196 834 aa25.88■■□□□ 1.73
SMG7-203ENST00000367538 HSP90AB2PQ58FF8 381 aa25.88■■□□□ 1.73
SMG7-203ENST00000367538 PELP1Q8IZL8 1130 aaKnown RBP25.88■■□□□ 1.73
SMG7-203ENST00000367538 NLGN2Q8NFZ4 835 aa25.88■■□□□ 1.73
SMG7-203ENST00000367538 PALLDQ8WX93 1383 aa25.86■■□□□ 1.73
SMG7-203ENST00000367538 SENP3-EIF4A1A0A087X0R7 540 aa25.84■■□□□ 1.73
SMG7-203ENST00000367538 SMARCC1Q92922 1105 aaPredicted RBP25.84■■□□□ 1.73
SMG7-203ENST00000367538 NCAPD2Q15021 1401 aa25.83■■□□□ 1.73
SMG7-203ENST00000367538 GIGYF1O75420 1035 aaPredicted RBP25.83■■□□□ 1.73
SMG7-203ENST00000367538 TAF1LQ8IZX4 1826 aa25.82■■□□□ 1.72
SMG7-203ENST00000367538 CD2APQ9Y5K6 639 aa25.82■■□□□ 1.72
SMG7-203ENST00000367538 PKD1L3Q7Z443 1732 aa25.82■■□□□ 1.72
SMG7-203ENST00000367538 NSD3Q9BZ95 1437 aa25.81■■□□□ 1.72
SMG7-203ENST00000367538 CYP27B1O15528 508 aa25.81■■□□□ 1.72
SMG7-203ENST00000367538 MPRIPQ6WCQ1 1025 aa25.81■■□□□ 1.72
SMG7-203ENST00000367538 YBX3P16989 372 aaKnown RBP eCLIP25.79■■□□□ 1.72
SMG7-203ENST00000367538 NKX1-1Q15270 411 aaPredicted RBP25.78■■□□□ 1.72
SMG7-203ENST00000367538 MSL1Q68DK7 614 aa25.78■■□□□ 1.72
SMG7-203ENST00000367538 C4BP0C0L5 1744 aa25.77■■□□□ 1.72
SMG7-203ENST00000367538 ANKRD26Q9UPS8 1709 aa25.77■■□□□ 1.72
SMG7-203ENST00000367538 TOGARAM1Q9Y4F4 1720 aa25.77■■□□□ 1.72
SMG7-203ENST00000367538 AK7Q96M32 723 aa25.77■■□□□ 1.72
SMG7-203ENST00000367538 CARD14Q9BXL6 1004 aa25.77■■□□□ 1.72
SMG7-203ENST00000367538 SPG7Q9UQ90 795 aa25.77■■□□□ 1.72
SMG7-203ENST00000367538 EMILIN1Q9Y6C2 1016 aa25.77■■□□□ 1.72
SMG7-203ENST00000367538 ITGB4P16144 1822 aa25.77■■□□□ 1.72
SMG7-203ENST00000367538 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.76■■□□□ 1.71
SMG7-203ENST00000367538 WASHC2AQ641Q2 1341 aa25.74■■□□□ 1.71
SMG7-203ENST00000367538 PLEKHG2Q9H7P9 1386 aa25.73■■□□□ 1.71
SMG7-203ENST00000367538 PIGBQ92521 554 aa25.73■■□□□ 1.71
SMG7-203ENST00000367538 UBR3Q6ZT12 1888 aa25.72■■□□□ 1.71
SMG7-203ENST00000367538 SSFA2P28290 1259 aa25.71■■□□□ 1.71
SMG7-203ENST00000367538 TIMELESSQ9UNS1 1208 aa25.71■■□□□ 1.71
SMG7-203ENST00000367538 LOC102724428A0A0B4J2F2 783 aa25.69■■□□□ 1.7
SMG7-203ENST00000367538 PPM1GO15355 546 aaPredicted RBP25.69■■□□□ 1.7
SMG7-203ENST00000367538 SIK1P57059 783 aa25.69■■□□□ 1.7
SMG7-203ENST00000367538 MAP2P11137 1827 aaKnown RBP25.69■■□□□ 1.7
SMG7-203ENST00000367538 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.68■■□□□ 1.7
SMG7-203ENST00000367538 EYA1Q99502 592 aa25.68■■□□□ 1.7
SMG7-203ENST00000367538 TMOD3Q9NYL9 352 aa25.68■■□□□ 1.7
SMG7-203ENST00000367538 ATP10DQ9P241 1426 aa25.67■■□□□ 1.7
SMG7-203ENST00000367538 TRIM26Q12899 539 aaPredicted RBP25.66■■□□□ 1.7
SMG7-203ENST00000367538 IFNL2Q8IZJ0 200 aa25.66■■□□□ 1.7
SMG7-203ENST00000367538 PHF14O94880 888 aa25.65■■□□□ 1.7
SMG7-203ENST00000367538 AMIGO3Q86WK7 504 aa25.65■■□□□ 1.7
SMG7-203ENST00000367538 PHKG2P15735 406 aa25.64■■□□□ 1.7
SMG7-203ENST00000367538 POLKQ9UBT6 870 aa25.64■■□□□ 1.7
SMG7-203ENST00000367538 ADCY9O60503 1353 aa25.64■■□□□ 1.69
SMG7-203ENST00000367538 LINC00116Q8NCU8 138 aa25.63■■□□□ 1.69
SMG7-203ENST00000367538 IGSF1Q8N6C5 1336 aa25.62■■□□□ 1.69
SMG7-203ENST00000367538 GPBP1L1Q9HC44 474 aaPredicted RBP25.61■■□□□ 1.69
SMG7-203ENST00000367538 GNPATO15228 680 aa25.6■■□□□ 1.69
SMG7-203ENST00000367538 ATP6V1AP38606 617 aa25.6■■□□□ 1.69
SMG7-203ENST00000367538 ASAP1Q9ULH1 1129 aa25.6■■□□□ 1.69
SMG7-203ENST00000367538 ITPK1Q13572 414 aa25.58■■□□□ 1.69
SMG7-203ENST00000367538 CLSPNQ9HAW4 1339 aa25.58■■□□□ 1.69
SMG7-203ENST00000367538 ZNF831Q5JPB2 1677 aa25.58■■□□□ 1.68
SMG7-203ENST00000367538 EIF4A2Q14240 407 aaKnown RBP25.57■■□□□ 1.68
SMG7-203ENST00000367538 ATG3Q9NT62 314 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms