RNA–Protein interactions for RNA: ENST00000367367.8

PTPRC-203, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 2,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-203ENST00000367367 CCER1Q8TC90 406 aaPredicted RBP4.47□□□□□ -1.69
PTPRC-203ENST00000367367 STAC3Q96MF2 364 aa4.47□□□□□ -1.69
PTPRC-203ENST00000367367 HIRIP3Q9BW71 556 aaPredicted RBP4.47□□□□□ -1.69
PTPRC-203ENST00000367367 C1orf167Q5SNV9 1468 aa4.47□□□□□ -1.69
PTPRC-203ENST00000367367 RALGAPBQ86X10 1494 aa4.47□□□□□ -1.69
PTPRC-203ENST00000367367 ROCK2O75116 1388 aaKnown RBP4.47□□□□□ -1.69
PTPRC-203ENST00000367367 SOCS7O14512 581 aa4.47□□□□□ -1.69
PTPRC-203ENST00000367367 FECHP22830 423 aa4.47□□□□□ -1.69
PTPRC-203ENST00000367367 AEBP1Q8IUX7 1158 aa4.47□□□□□ -1.69
PTPRC-203ENST00000367367 DDX17Q92841 729 aaKnown RBP4.47□□□□□ -1.69
PTPRC-203ENST00000367367 MINK1Q8N4C8 1332 aaPredicted RBP4.47□□□□□ -1.69
PTPRC-203ENST00000367367 MARF1Q9Y4F3 1742 aaKnown RBP4.46□□□□□ -1.7
PTPRC-203ENST00000367367 BRINP3Q76B58 766 aa4.46□□□□□ -1.7
PTPRC-203ENST00000367367 PARP9Q8IXQ6 854 aa4.46□□□□□ -1.7
PTPRC-203ENST00000367367 LARP6Q9BRS8 491 aaKnown RBP4.46□□□□□ -1.7
PTPRC-203ENST00000367367 RYDENQ9NUL5 291 aaKnown RBP4.46□□□□□ -1.7
PTPRC-203ENST00000367367 POGKQ9P215 609 aa4.46□□□□□ -1.7
PTPRC-203ENST00000367367 PHF8Q9UPP1 1060 aa4.46□□□□□ -1.7
PTPRC-203ENST00000367367 MED1Q15648 1581 aaPredicted RBP4.46□□□□□ -1.7
PTPRC-203ENST00000367367 ABCA3Q99758 1704 aa4.46□□□□□ -1.7
PTPRC-203ENST00000367367 TULP4Q9NRJ4 1543 aa4.46□□□□□ -1.7
PTPRC-203ENST00000367367 GPIHBP1Q8IV16 184 aa4.46□□□□□ -1.7
PTPRC-203ENST00000367367 ORAI2Q96SN7 254 aa4.46□□□□□ -1.7
PTPRC-203ENST00000367367 REPIN1Q9BWE0 567 aaKnown RBP4.46□□□□□ -1.7
PTPRC-203ENST00000367367 TRPM3Q9HCF6 1732 aaPredicted RBP4.45□□□□□ -1.7
PTPRC-203ENST00000367367 ATP7BP35670 1465 aa4.45□□□□□ -1.7
PTPRC-203ENST00000367367 PTPN5P54829 565 aa4.45□□□□□ -1.7
PTPRC-203ENST00000367367 ILDR2Q71H61 639 aa4.45□□□□□ -1.7
PTPRC-203ENST00000367367 FNBP4Q8N3X1 1017 aaPredicted RBP4.45□□□□□ -1.7
PTPRC-203ENST00000367367 KRI1Q8N9T8 703 aaKnown RBP4.45□□□□□ -1.7
PTPRC-203ENST00000367367 MS4A4AQ96JQ5 239 aa4.45□□□□□ -1.7
PTPRC-203ENST00000367367 CLSPNQ9HAW4 1339 aa4.45□□□□□ -1.7
PTPRC-203ENST00000367367 GPRASP1Q5JY77 1395 aa4.45□□□□□ -1.7
PTPRC-203ENST00000367367 AKAP12Q02952 1782 aa4.45□□□□□ -1.7
PTPRC-203ENST00000367367 EP400Q96L91 3159 aa4.44□□□□□ -1.7
PTPRC-203ENST00000367367 ESCO1Q5FWF5 840 aa4.44□□□□□ -1.7
PTPRC-203ENST00000367367 RETREG2Q8NC44 543 aa4.44□□□□□ -1.7
PTPRC-203ENST00000367367 PXDNQ92626 1479 aa4.44□□□□□ -1.7
PTPRC-203ENST00000367367 ALS2Q96Q42 1657 aa4.44□□□□□ -1.7
PTPRC-203ENST00000367367 CRYBG1Q9Y4K1 1723 aa4.44□□□□□ -1.7
PTPRC-203ENST00000367367 CARNS1A5YM72 827 aa4.44□□□□□ -1.7
PTPRC-203ENST00000367367 XPCQ01831 940 aaPredicted RBP4.44□□□□□ -1.7
PTPRC-203ENST00000367367 MCM6Q14566 821 aa4.44□□□□□ -1.7
PTPRC-203ENST00000367367 SIRT1Q96EB6 747 aa4.44□□□□□ -1.7
PTPRC-203ENST00000367367 CARD11Q9BXL7 1154 aa4.44□□□□□ -1.7
PTPRC-203ENST00000367367 PRR36Q9H6K5 1346 aa4.44□□□□□ -1.7
PTPRC-203ENST00000367367 CENPJQ9HC77 1338 aaPredicted RBP4.44□□□□□ -1.7
PTPRC-203ENST00000367367 FOXO3O43524 673 aa4.43□□□□□ -1.7
PTPRC-203ENST00000367367 TRAF7Q6Q0C0 670 aa4.43□□□□□ -1.7
PTPRC-203ENST00000367367 EFCAB3Q8N7B9 438 aa4.43□□□□□ -1.7
PTPRC-203ENST00000367367 LRP6O75581 1613 aa4.43□□□□□ -1.7
PTPRC-203ENST00000367367 COL22A1Q8NFW1 1626 aaPredicted RBP4.43□□□□□ -1.7
PTPRC-203ENST00000367367 MON2Q7Z3U7 1717 aa4.43□□□□□ -1.7
PTPRC-203ENST00000367367 MYOM1P52179 1685 aa4.43□□□□□ -1.7
PTPRC-203ENST00000367367 ANKARQ7Z5J8 1434 aa4.43□□□□□ -1.7
PTPRC-203ENST00000367367 EIF3AQ14152 1382 aaKnown RBP4.43□□□□□ -1.7
PTPRC-203ENST00000367367 WASLO00401 505 aaPredicted RBP4.43□□□□□ -1.7
PTPRC-203ENST00000367367 NUDT7P0C024 238 aa4.43□□□□□ -1.7
PTPRC-203ENST00000367367 PDAP1Q13442 181 aaKnown RBP4.43□□□□□ -1.7
PTPRC-203ENST00000367367 MICALL2Q8IY33 904 aa4.43□□□□□ -1.7
PTPRC-203ENST00000367367 PMFBP1Q8TBY8 1022 aa4.43□□□□□ -1.7
PTPRC-203ENST00000367367 CRISPLD2Q9H0B8 497 aa4.43□□□□□ -1.7
PTPRC-203ENST00000367367 MS4A1P11836 297 aa4.42□□□□□ -1.7
PTPRC-203ENST00000367367 RBM25P49756 843 aaKnown RBP4.42□□□□□ -1.7
PTPRC-203ENST00000367367 CAMK2BQ13554 666 aa4.42□□□□□ -1.7
PTPRC-203ENST00000367367 MFSD10Q14728 455 aa4.42□□□□□ -1.7
PTPRC-203ENST00000367367 TRAIPQ9BWF2 469 aa4.42□□□□□ -1.7
PTPRC-203ENST00000367367 EMILIN3Q9NT22 766 aa4.42□□□□□ -1.7
PTPRC-203ENST00000367367 PHRF1Q9P1Y6 1649 aaKnown RBP4.42□□□□□ -1.7
PTPRC-203ENST00000367367 NRKQ7Z2Y5 1582 aa4.42□□□□□ -1.7
PTPRC-203ENST00000367367 USP47Q96K76 1375 aa4.42□□□□□ -1.7
PTPRC-203ENST00000367367 JCADQ9P266 1359 aa4.42□□□□□ -1.7
PTPRC-203ENST00000367367 NPHP3Q7Z494 1330 aa4.42□□□□□ -1.7
PTPRC-203ENST00000367367 A6NJR5 290 aa4.42□□□□□ -1.7
PTPRC-203ENST00000367367 SRPK2P78362 688 aaKnown RBP4.42□□□□□ -1.7
PTPRC-203ENST00000367367 CCDC102AQ96A19 550 aa4.42□□□□□ -1.7
PTPRC-203ENST00000367367 CDK19Q9BWU1 502 aa4.42□□□□□ -1.7
PTPRC-203ENST00000367367 GZF1Q9H116 711 aaPredicted RBP4.42□□□□□ -1.7
PTPRC-203ENST00000367367 LHX6Q9UPM6 363 aa4.42□□□□□ -1.7
PTPRC-203ENST00000367367 ARIH1Q9Y4X5 557 aaPredicted RBP4.42□□□□□ -1.7
PTPRC-203ENST00000367367 RGPD5Q99666 1765 aa4.42□□□□□ -1.7
PTPRC-203ENST00000367367 PLCH1Q4KWH8 1693 aa4.42□□□□□ -1.7
PTPRC-203ENST00000367367 PPIP5K1Q6PFW1 1433 aa4.41□□□□□ -1.7
PTPRC-203ENST00000367367 PNPLA6Q8IY17 1366 aa4.41□□□□□ -1.7
PTPRC-203ENST00000367367 DISP3Q9P2K9 1392 aa4.41□□□□□ -1.7
PTPRC-203ENST00000367367 SOS2Q07890 1332 aaPredicted RBP4.41□□□□□ -1.7
PTPRC-203ENST00000367367 PIK3C2AO00443 1686 aa4.41□□□□□ -1.7
PTPRC-203ENST00000367367 MFAP1P55081 439 aaKnown RBP4.41□□□□□ -1.7
PTPRC-203ENST00000367367 ZNF775Q96BV0 537 aaPredicted RBP4.41□□□□□ -1.7
PTPRC-203ENST00000367367 NUDT16Q96DE0 195 aaKnown RBP4.41□□□□□ -1.7
PTPRC-203ENST00000367367 SBNO2Q9Y2G9 1366 aa4.41□□□□□ -1.7
PTPRC-203ENST00000367367 ST20-MTHFSA0A0A6YYL1 179 aa4.41□□□□□ -1.7
PTPRC-203ENST00000367367 HRO43593 1189 aa4.41□□□□□ -1.7
PTPRC-203ENST00000367367 LTN1O94822 1766 aa4.4□□□□□ -1.7
PTPRC-203ENST00000367367 TNS3Q68CZ2 1445 aa4.4□□□□□ -1.7
PTPRC-203ENST00000367367 KIF20BQ96Q89 1820 aa4.4□□□□□ -1.7
PTPRC-203ENST00000367367 NUTM2BA6NNL0 878 aaPredicted RBP4.4□□□□□ -1.71
PTPRC-203ENST00000367367 NUTM2EB1AL46 878 aaPredicted RBP4.4□□□□□ -1.71
PTPRC-203ENST00000367367 ARHGAP33O14559 1287 aa4.4□□□□□ -1.71
PTPRC-203ENST00000367367 NUTM2AQ8IVF1 878 aaPredicted RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms