RNA–Protein interactions for RNA: ENST00000366873.6

CAPN8-202, Transcript of calpain 8, humanhuman

TSL 5 BASIC

Gene CAPN8, Length 2,596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-202ENST00000366873 TMPOP42166 694 aaKnown RBP12.87□□□□□ -0.35
CAPN8-202ENST00000366873 HNRNPUQ00839 825 aaKnown RBP eCLIP12.87□□□□□ -0.35
CAPN8-202ENST00000366873 RGS17Q9UGC6 210 aaPredicted RBP12.86□□□□□ -0.35
CAPN8-202ENST00000366873 RAPGEF4Q8WZA2 1011 aa12.86□□□□□ -0.35
CAPN8-202ENST00000366873 SALL2Q9Y467 1007 aaPredicted RBP12.86□□□□□ -0.35
CAPN8-202ENST00000366873 DISP2A7MBM2 1401 aa12.86□□□□□ -0.35
CAPN8-202ENST00000366873 IL2RBP14784 551 aa12.85□□□□□ -0.35
CAPN8-202ENST00000366873 NEUROD2Q15784 382 aa12.85□□□□□ -0.35
CAPN8-202ENST00000366873 MAPK8IP3Q9UPT6 1336 aa12.85□□□□□ -0.35
CAPN8-202ENST00000366873 POTEHQ6S545 545 aa12.85□□□□□ -0.35
CAPN8-202ENST00000366873 THRAP3Q9Y2W1 955 aaKnown RBP12.85□□□□□ -0.35
CAPN8-202ENST00000366873 ATRNO75882 1429 aa12.85□□□□□ -0.35
CAPN8-202ENST00000366873 EP400Q96L91 3159 aa12.85□□□□□ -0.35
CAPN8-202ENST00000366873 GJD4Q96KN9 370 aaPredicted RBP12.84□□□□□ -0.35
CAPN8-202ENST00000366873 QTRT2Q9H974 415 aaKnown RBP12.84□□□□□ -0.35
CAPN8-202ENST00000366873 TRIM35Q9UPQ4 493 aa12.84□□□□□ -0.35
CAPN8-202ENST00000366873 CCDC9Q9Y3X0 531 aaKnown RBP12.84□□□□□ -0.35
CAPN8-202ENST00000366873 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.84□□□□□ -0.35
CAPN8-202ENST00000366873 NEFLP07196 543 aa12.84□□□□□ -0.35
CAPN8-202ENST00000366873 TATP17735 454 aaPredicted RBP12.84□□□□□ -0.35
CAPN8-202ENST00000366873 NFE2L2Q16236 605 aa12.84□□□□□ -0.35
CAPN8-202ENST00000366873 BARGINQ6ZT62 677 aa12.84□□□□□ -0.35
CAPN8-202ENST00000366873 TRPC5Q9UL62 973 aaPredicted RBP12.84□□□□□ -0.35
CAPN8-202ENST00000366873 OVOS2A0A0G2JMS6 1433 aa12.84□□□□□ -0.35
CAPN8-202ENST00000366873 RIPK4P57078 832 aa12.83□□□□□ -0.35
CAPN8-202ENST00000366873 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.83□□□□□ -0.35
CAPN8-202ENST00000366873 ZNF521Q96K83 1311 aa12.83□□□□□ -0.36
CAPN8-202ENST00000366873 CYP27B1O15528 508 aa12.82□□□□□ -0.36
CAPN8-202ENST00000366873 FAM98CQ17RN3 349 aaKnown RBP12.82□□□□□ -0.36
CAPN8-202ENST00000366873 AMOTQ4VCS5 1084 aa12.82□□□□□ -0.36
CAPN8-202ENST00000366873 ONECUT3O60422 494 aaPredicted RBP12.82□□□□□ -0.36
CAPN8-202ENST00000366873 NEFMP07197 916 aa12.82□□□□□ -0.36
CAPN8-202ENST00000366873 PLEKHO1Q53GL0 409 aaPredicted RBP12.82□□□□□ -0.36
CAPN8-202ENST00000366873 WWC1Q8IX03 1113 aa12.82□□□□□ -0.36
CAPN8-202ENST00000366873 GLI3P10071 1580 aa12.82□□□□□ -0.36
CAPN8-202ENST00000366873 PLEKHG2Q9H7P9 1386 aa12.81□□□□□ -0.36
CAPN8-202ENST00000366873 CCDC27Q2M243 656 aa12.81□□□□□ -0.36
CAPN8-202ENST00000366873 NCBP3Q53F19 620 aaKnown RBP12.81□□□□□ -0.36
CAPN8-202ENST00000366873 GAS2L2Q8NHY3 880 aa12.81□□□□□ -0.36
CAPN8-202ENST00000366873 DCTN1Q14203 1278 aa12.81□□□□□ -0.36
CAPN8-202ENST00000366873 ZNF772Q68DY9 489 aaPredicted RBP12.81□□□□□ -0.36
CAPN8-202ENST00000366873 ZCRB1Q8TBF4 217 aaKnown RBP12.81□□□□□ -0.36
CAPN8-202ENST00000366873 ZBED9Q6R2W3 1325 aa12.8□□□□□ -0.36
CAPN8-202ENST00000366873 ZNF530Q6P9A1 599 aaPredicted RBP12.8□□□□□ -0.36
CAPN8-202ENST00000366873 IL17REQ8NFR9 667 aa12.8□□□□□ -0.36
CAPN8-202ENST00000366873 SPG7Q9UQ90 795 aa12.8□□□□□ -0.36
CAPN8-202ENST00000366873 PHKG2P15735 406 aa12.79□□□□□ -0.36
CAPN8-202ENST00000366873 AKAP4Q5JQC9 854 aa12.79□□□□□ -0.36
CAPN8-202ENST00000366873 THUMPD2Q9BTF0 503 aaKnown RBP12.79□□□□□ -0.36
CAPN8-202ENST00000366873 CDCA7Q9BWT1 371 aaPredicted RBP12.79□□□□□ -0.36
CAPN8-202ENST00000366873 MCM10Q7L590 875 aa12.79□□□□□ -0.36
CAPN8-202ENST00000366873 NGEFQ8N5V2 710 aa12.79□□□□□ -0.36
CAPN8-202ENST00000366873 LGR6Q9HBX8 967 aa12.79□□□□□ -0.36
CAPN8-202ENST00000366873 SPINK5Q9NQ38 1064 aaPredicted RBP12.79□□□□□ -0.36
CAPN8-202ENST00000366873 GNAT3A8MTJ3 354 aa12.78□□□□□ -0.36
CAPN8-202ENST00000366873 EXOC5O00471 708 aa12.78□□□□□ -0.36
CAPN8-202ENST00000366873 POTEAQ6S8J7 498 aa12.78□□□□□ -0.36
CAPN8-202ENST00000366873 PKD1L3Q7Z443 1732 aa12.78□□□□□ -0.36
CAPN8-202ENST00000366873 DDX54Q8TDD1 881 aaKnown RBP12.78□□□□□ -0.36
CAPN8-202ENST00000366873 PARP4Q9UKK3 1724 aaKnown RBP12.78□□□□□ -0.36
CAPN8-202ENST00000366873 DDB1Q16531 1140 aa12.77□□□□□ -0.36
CAPN8-202ENST00000366873 MPRIPQ6WCQ1 1025 aa12.77□□□□□ -0.36
CAPN8-202ENST00000366873 IFNL2Q8IZJ0 200 aa12.77□□□□□ -0.36
CAPN8-202ENST00000366873 CDCA7LQ96GN5 454 aa12.77□□□□□ -0.36
CAPN8-202ENST00000366873 DLG5Q8TDM6 1919 aa12.77□□□□□ -0.36
CAPN8-202ENST00000366873 MAP3K5Q99683 1374 aa12.77□□□□□ -0.36
CAPN8-202ENST00000366873 SHANK3Q9BYB0 1731 aa12.77□□□□□ -0.36
CAPN8-202ENST00000366873 PCDH11XQ9BZA7 1347 aa12.77□□□□□ -0.37
CAPN8-202ENST00000366873 PCDH11YQ9BZA8 1340 aa12.77□□□□□ -0.37
CAPN8-202ENST00000366873 HTATSF1O43719 755 aaKnown RBP12.76□□□□□ -0.37
CAPN8-202ENST00000366873 NKX1-1Q15270 411 aaPredicted RBP12.76□□□□□ -0.37
CAPN8-202ENST00000366873 WNK3Q9BYP7 1800 aa12.76□□□□□ -0.37
CAPN8-202ENST00000366873 CEMIPQ8WUJ3 1361 aa12.76□□□□□ -0.37
CAPN8-202ENST00000366873 RBM6P78332 1123 aaKnown RBP12.76□□□□□ -0.37
CAPN8-202ENST00000366873 C1orf141Q5JVX7 400 aa12.76□□□□□ -0.37
CAPN8-202ENST00000366873 MARCH10Q8NA82 808 aaPredicted RBP12.76□□□□□ -0.37
CAPN8-202ENST00000366873 TNS2Q63HR2 1409 aa12.76□□□□□ -0.37
CAPN8-202ENST00000366873 SEPT12Q8IYM1 358 aa12.76□□□□□ -0.37
CAPN8-202ENST00000366873 KDM6AO15550 1401 aaPredicted RBP12.75□□□□□ -0.37
CAPN8-202ENST00000366873 THSD7AQ9UPZ6 1657 aa12.75□□□□□ -0.37
CAPN8-202ENST00000366873 LRRC37A3O60309 1634 aa12.75□□□□□ -0.37
CAPN8-202ENST00000366873 WDR63Q8IWG1 891 aa12.75□□□□□ -0.37
CAPN8-202ENST00000366873 RNMTO43148 476 aaKnown RBP12.75□□□□□ -0.37
CAPN8-202ENST00000366873 RTF1Q92541 710 aaKnown RBP12.75□□□□□ -0.37
CAPN8-202ENST00000366873 LMOD3Q0VAK6 560 aa12.74□□□□□ -0.37
CAPN8-202ENST00000366873 GOLGA2Q08379 1002 aa12.74□□□□□ -0.37
CAPN8-202ENST00000366873 DCAF5Q96JK2 942 aa12.74□□□□□ -0.37
CAPN8-202ENST00000366873 RBM19Q9Y4C8 960 aaKnown RBP12.74□□□□□ -0.37
CAPN8-202ENST00000366873 ZNF853P0CG23 659 aa12.73□□□□□ -0.37
CAPN8-202ENST00000366873 RXRBP28702 533 aa12.73□□□□□ -0.37
CAPN8-202ENST00000366873 TRMT2AQ8IZ69 625 aaKnown RBP12.73□□□□□ -0.37
CAPN8-202ENST00000366873 ADAMTS7Q9UKP4 1686 aa12.73□□□□□ -0.37
CAPN8-202ENST00000366873 SLFN5Q08AF3 891 aa12.73□□□□□ -0.37
CAPN8-202ENST00000366873 A0A0G2JS52 829 aa12.72□□□□□ -0.37
CAPN8-202ENST00000366873 FAM182BQ5T319 152 aa12.72□□□□□ -0.37
CAPN8-202ENST00000366873 HSP90AB1P08238 724 aaKnown RBP12.72□□□□□ -0.37
CAPN8-202ENST00000366873 MIS18AQ9NYP9 233 aa12.72□□□□□ -0.37
CAPN8-202ENST00000366873 PDE3BQ13370 1112 aa12.71□□□□□ -0.37
CAPN8-202ENST00000366873 DUSP27Q5VZP5 1158 aa12.71□□□□□ -0.37
CAPN8-202ENST00000366873 NFATC2IPQ8NCF5 419 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms