RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 UHRF1BP1Q6BDS2 1440 aa14.24□□□□□ -0.13
CDC42BPA-203ENST00000366766 GNAT3A8MTJ3 354 aa14.24□□□□□ -0.13
CDC42BPA-203ENST00000366766 CEP57L1Q8IYX8 460 aa14.24□□□□□ -0.13
CDC42BPA-203ENST00000366766 PDCL2Q8N4E4 241 aa14.24□□□□□ -0.13
CDC42BPA-203ENST00000366766 ZNHIT6Q9NWK9 470 aaKnown RBP14.24□□□□□ -0.13
CDC42BPA-203ENST00000366766 SCAND2PQ9GZW5 306 aaPredicted RBP14.24□□□□□ -0.13
CDC42BPA-203ENST00000366766 MAGEC2Q9UBF1 373 aaPredicted RBP14.23□□□□□ -0.13
CDC42BPA-203ENST00000366766 FIBPO43427 364 aa14.23□□□□□ -0.13
CDC42BPA-203ENST00000366766 HMGB1P09429 215 aaKnown RBP14.23□□□□□ -0.13
CDC42BPA-203ENST00000366766 OFD1O75665 1012 aa14.23□□□□□ -0.13
CDC42BPA-203ENST00000366766 AIMP1Q12904 312 aaKnown RBP14.23□□□□□ -0.13
CDC42BPA-203ENST00000366766 INSRP06213 1382 aa14.23□□□□□ -0.13
CDC42BPA-203ENST00000366766 BMP2KLQ5H9B9 411 aa14.23□□□□□ -0.13
CDC42BPA-203ENST00000366766 LARP1BQ659C4 914 aaKnown RBP14.22□□□□□ -0.13
CDC42BPA-203ENST00000366766 U3KPZ7 1027 aaPredicted RBP14.22□□□□□ -0.13
CDC42BPA-203ENST00000366766 MCM5P33992 734 aa14.22□□□□□ -0.13
CDC42BPA-203ENST00000366766 SRGAP3O43295 1099 aa14.22□□□□□ -0.13
CDC42BPA-203ENST00000366766 ARHGAP45Q92619 1136 aa14.22□□□□□ -0.13
CDC42BPA-203ENST00000366766 PRAG1Q86YV5 1406 aa14.22□□□□□ -0.13
CDC42BPA-203ENST00000366766 ANKLE2Q86XL3 938 aa14.22□□□□□ -0.13
CDC42BPA-203ENST00000366766 RRP9O43818 475 aaKnown RBP14.21□□□□□ -0.13
CDC42BPA-203ENST00000366766 SYTL4Q96C24 671 aaPredicted RBP14.21□□□□□ -0.13
CDC42BPA-203ENST00000366766 CCDC27Q2M243 656 aa14.21□□□□□ -0.13
CDC42BPA-203ENST00000366766 KDM5AP29375 1690 aaKnown RBP14.21□□□□□ -0.13
CDC42BPA-203ENST00000366766 ESPNB1AK53 854 aa14.21□□□□□ -0.13
CDC42BPA-203ENST00000366766 DENND4BO75064 1496 aaPredicted RBP14.21□□□□□ -0.14
CDC42BPA-203ENST00000366766 ESCO1Q5FWF5 840 aa14.21□□□□□ -0.14
CDC42BPA-203ENST00000366766 ZNF518AQ6AHZ1 1483 aa14.2□□□□□ -0.14
CDC42BPA-203ENST00000366766 SMTNL1A8MU46 457 aa14.2□□□□□ -0.14
CDC42BPA-203ENST00000366766 CCDC57Q2TAC2 916 aa14.2□□□□□ -0.14
CDC42BPA-203ENST00000366766 TTC39AQ5SRH9 613 aa14.2□□□□□ -0.14
CDC42BPA-203ENST00000366766 TMEM57Q8N5G2 664 aa14.2□□□□□ -0.14
CDC42BPA-203ENST00000366766 ERLIN1O75477 346 aa14.2□□□□□ -0.14
CDC42BPA-203ENST00000366766 ZSCAN30Q86W11 494 aa14.2□□□□□ -0.14
CDC42BPA-203ENST00000366766 MYO5CQ9NQX4 1742 aa14.2□□□□□ -0.14
CDC42BPA-203ENST00000366766 PARD3Q8TEW0 1356 aa14.2□□□□□ -0.14
CDC42BPA-203ENST00000366766 SMC2O95347 1197 aa14.2□□□□□ -0.14
CDC42BPA-203ENST00000366766 NOL7Q9UMY1 257 aaKnown RBP14.2□□□□□ -0.14
CDC42BPA-203ENST00000366766 CTAGE5O15320 804 aa14.2□□□□□ -0.14
CDC42BPA-203ENST00000366766 MX1P20591 662 aa14.2□□□□□ -0.14
CDC42BPA-203ENST00000366766 ME1P48163 572 aa14.2□□□□□ -0.14
CDC42BPA-203ENST00000366766 TEX14Q8IWB6 1497 aa14.2□□□□□ -0.14
CDC42BPA-203ENST00000366766 MAST1Q9Y2H9 1570 aa14.19□□□□□ -0.14
CDC42BPA-203ENST00000366766 VSIG10Q8N0Z9 540 aa14.19□□□□□ -0.14
CDC42BPA-203ENST00000366766 KIF1BO60333 1816 aa14.19□□□□□ -0.14
CDC42BPA-203ENST00000366766 AKAP2Q9Y2D5 859 aa14.19□□□□□ -0.14
CDC42BPA-203ENST00000366766 CDK5RAP3Q96JB5 506 aa14.19□□□□□ -0.14
CDC42BPA-203ENST00000366766 CEP131Q9UPN4 1083 aa14.19□□□□□ -0.14
CDC42BPA-203ENST00000366766 PIK3C2GO75747 1445 aa14.19□□□□□ -0.14
CDC42BPA-203ENST00000366766 NUDT16Q96DE0 195 aaKnown RBP14.19□□□□□ -0.14
CDC42BPA-203ENST00000366766 SPATA32Q96LK8 384 aa14.19□□□□□ -0.14
CDC42BPA-203ENST00000366766 CAGE1Q8TC20 777 aa14.19□□□□□ -0.14
CDC42BPA-203ENST00000366766 LARP1Q6PKG0 1096 aaKnown RBP14.19□□□□□ -0.14
CDC42BPA-203ENST00000366766 RNF214Q8ND24 703 aa14.19□□□□□ -0.14
CDC42BPA-203ENST00000366766 NUP62CLQ9H1M0 184 aa14.19□□□□□ -0.14
CDC42BPA-203ENST00000366766 PDRG1Q9NUG6 133 aa14.19□□□□□ -0.14
CDC42BPA-203ENST00000366766 BTBD11A6QL63 1104 aa14.19□□□□□ -0.14
CDC42BPA-203ENST00000366766 CT47A1Q5JQC4 288 aaPredicted RBP14.19□□□□□ -0.14
CDC42BPA-203ENST00000366766 SYCP2Q9BX26 1530 aa14.18□□□□□ -0.14
CDC42BPA-203ENST00000366766 CCAR1Q8IX12 1150 aaKnown RBP14.18□□□□□ -0.14
CDC42BPA-203ENST00000366766 CCDC112Q8NEF3 446 aa14.18□□□□□ -0.14
CDC42BPA-203ENST00000366766 SSH1Q8WYL5 1049 aa14.18□□□□□ -0.14
CDC42BPA-203ENST00000366766 R3HCC1Q9Y3T6 440 aaKnown RBP14.18□□□□□ -0.14
CDC42BPA-203ENST00000366766 EIF3JO75822 258 aaKnown RBP14.18□□□□□ -0.14
CDC42BPA-203ENST00000366766 AACSQ86V21 672 aa14.18□□□□□ -0.14
CDC42BPA-203ENST00000366766 ZFYVE9O95405 1425 aa14.18□□□□□ -0.14
CDC42BPA-203ENST00000366766 MAP3K11Q16584 847 aa14.18□□□□□ -0.14
CDC42BPA-203ENST00000366766 TAF3Q5VWG9 929 aa14.18□□□□□ -0.14
CDC42BPA-203ENST00000366766 PPFIBP1Q86W92 1011 aa14.18□□□□□ -0.14
CDC42BPA-203ENST00000366766 DNAJC2Q99543 621 aaKnown RBP14.18□□□□□ -0.14
CDC42BPA-203ENST00000366766 CCDC196A0A1B0GTZ2 297 aa14.18□□□□□ -0.14
CDC42BPA-203ENST00000366766 CABP4P57796 275 aa14.18□□□□□ -0.14
CDC42BPA-203ENST00000366766 ZNF287Q9HBT7 754 aa14.18□□□□□ -0.14
CDC42BPA-203ENST00000366766 NUP153P49790 1475 aaKnown RBP14.17□□□□□ -0.14
CDC42BPA-203ENST00000366766 NEMFO60524 1076 aa14.17□□□□□ -0.14
CDC42BPA-203ENST00000366766 C1orf115Q9H7X2 142 aa14.17□□□□□ -0.14
CDC42BPA-203ENST00000366766 HDAC1Q13547 482 aaPredicted RBP14.17□□□□□ -0.14
CDC42BPA-203ENST00000366766 NAP1L1P55209 391 aaKnown RBP14.17□□□□□ -0.14
CDC42BPA-203ENST00000366766 DUSP27Q5VZP5 1158 aa14.17□□□□□ -0.14
CDC42BPA-203ENST00000366766 CNNM1Q9NRU3 951 aa14.17□□□□□ -0.14
CDC42BPA-203ENST00000366766 CEP126Q9P2H0 1117 aa14.17□□□□□ -0.14
CDC42BPA-203ENST00000366766 HYPKQ9NX55 129 aa14.17□□□□□ -0.14
CDC42BPA-203ENST00000366766 ERLIN2O94905 339 aa14.17□□□□□ -0.14
CDC42BPA-203ENST00000366766 CCDC183Q5T5S1 534 aa14.17□□□□□ -0.14
CDC42BPA-203ENST00000366766 PDILTQ8N807 584 aa14.16□□□□□ -0.14
CDC42BPA-203ENST00000366766 PHAXQ9H814 394 aaKnown RBP14.16□□□□□ -0.14
CDC42BPA-203ENST00000366766 TAF7Q15545 349 aaPredicted RBP14.16□□□□□ -0.14
CDC42BPA-203ENST00000366766 ODF2Q5BJF6 829 aa14.16□□□□□ -0.14
CDC42BPA-203ENST00000366766 PROSER2Q86WR7 435 aaPredicted RBP14.16□□□□□ -0.14
CDC42BPA-203ENST00000366766 SAMD9Q5K651 1589 aa14.16□□□□□ -0.14
CDC42BPA-203ENST00000366766 PLCH2O75038 1416 aa14.16□□□□□ -0.14
CDC42BPA-203ENST00000366766 CCDC69A6NI79 296 aa14.16□□□□□ -0.14
CDC42BPA-203ENST00000366766 CFAP74Q9C0B2 1584 aa14.15□□□□□ -0.14
CDC42BPA-203ENST00000366766 C14orf93Q9H972 538 aaKnown RBP14.15□□□□□ -0.14
CDC42BPA-203ENST00000366766 NPC1L1Q9UHC9 1359 aa14.15□□□□□ -0.14
CDC42BPA-203ENST00000366766 IMMTQ16891 758 aaKnown RBP14.15□□□□□ -0.14
CDC42BPA-203ENST00000366766 MPHOSPH8Q99549 860 aa14.15□□□□□ -0.14
CDC42BPA-203ENST00000366766 SERPINC1P01008 464 aa14.15□□□□□ -0.14
CDC42BPA-203ENST00000366766 SOS1Q07889 1333 aaPredicted RBP14.15□□□□□ -0.14
CDC42BPA-203ENST00000366766 ABCA5Q8WWZ7 1642 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms