RNA–Protein interactions for RNA: ENST00000366740.5

MRPL55-213, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-213ENST00000366740 TMC1Q8TDI8 760 aa16.53■□□□□ 0.24
MRPL55-213ENST00000366740 TERF2IPQ9NYB0 399 aa16.53■□□□□ 0.24
MRPL55-213ENST00000366740 MEGF6O75095 1541 aa16.53■□□□□ 0.24
MRPL55-213ENST00000366740 ANKRD26Q9UPS8 1709 aa16.53■□□□□ 0.24
MRPL55-213ENST00000366740 GOLGB1Q14789 3259 aaKnown RBP16.52■□□□□ 0.23
MRPL55-213ENST00000366740 MAP2P11137 1827 aaKnown RBP16.5■□□□□ 0.23
MRPL55-213ENST00000366740 RTL1A6NKG5 1358 aa16.49■□□□□ 0.23
MRPL55-213ENST00000366740 MAP3K19Q56UN5 1328 aa16.48■□□□□ 0.23
MRPL55-213ENST00000366740 C4BP0C0L5 1744 aa16.48■□□□□ 0.23
MRPL55-213ENST00000366740 DDX54Q8TDD1 881 aaKnown RBP16.48■□□□□ 0.23
MRPL55-213ENST00000366740 POLD1P28340 1107 aa16.47■□□□□ 0.23
MRPL55-213ENST00000366740 HOXC9P31274 260 aa16.47■□□□□ 0.23
MRPL55-213ENST00000366740 C1QTNF8P60827 252 aa16.47■□□□□ 0.23
MRPL55-213ENST00000366740 TONSLQ96HA7 1378 aa16.47■□□□□ 0.23
MRPL55-213ENST00000366740 GPR162Q16538 588 aa16.46■□□□□ 0.23
MRPL55-213ENST00000366740 LTV1Q96GA3 475 aaPredicted RBP16.46■□□□□ 0.23
MRPL55-213ENST00000366740 TESK2Q96S53 571 aa16.46■□□□□ 0.23
MRPL55-213ENST00000366740 PRIM1P49642 420 aaKnown RBP16.45■□□□□ 0.22
MRPL55-213ENST00000366740 COG3Q96JB2 828 aa16.45■□□□□ 0.22
MRPL55-213ENST00000366740 SENP3-EIF4A1A0A087X0R7 540 aa16.44■□□□□ 0.22
MRPL55-213ENST00000366740 KCNQ4P56696 695 aa16.44■□□□□ 0.22
MRPL55-213ENST00000366740 ZCRB1Q8TBF4 217 aaKnown RBP16.44■□□□□ 0.22
MRPL55-213ENST00000366740 SYTL4Q96C24 671 aaPredicted RBP16.44■□□□□ 0.22
MRPL55-213ENST00000366740 TFCP2L1Q9NZI6 479 aa16.44■□□□□ 0.22
MRPL55-213ENST00000366740 KIF13BQ9NQT8 1826 aa16.44■□□□□ 0.22
MRPL55-213ENST00000366740 NLGN2Q8NFZ4 835 aa16.43■□□□□ 0.22
MRPL55-213ENST00000366740 CGNL1Q0VF96 1302 aa16.43■□□□□ 0.22
MRPL55-213ENST00000366740 FBLN1P23142 703 aa16.42■□□□□ 0.22
MRPL55-213ENST00000366740 AMPHP49418 695 aa16.42■□□□□ 0.22
MRPL55-213ENST00000366740 KLHL34Q8N239 644 aa16.42■□□□□ 0.22
MRPL55-213ENST00000366740 USP47Q96K76 1375 aa16.41■□□□□ 0.22
MRPL55-213ENST00000366740 CCNL1Q9UK58 526 aaPredicted RBP16.41■□□□□ 0.22
MRPL55-213ENST00000366740 SMG6Q86US8 1419 aaKnown RBP16.41■□□□□ 0.22
MRPL55-213ENST00000366740 KIAA1551Q9HCM1 1747 aa16.41■□□□□ 0.22
MRPL55-213ENST00000366740 BRCA1P38398 1863 aaKnown RBP16.39■□□□□ 0.22
MRPL55-213ENST00000366740 ST20-MTHFSA0A0A6YYL1 179 aa16.39■□□□□ 0.21
MRPL55-213ENST00000366740 SLC24A1O60721 1099 aa16.39■□□□□ 0.21
MRPL55-213ENST00000366740 NBPF6Q5VWK0 638 aa16.39■□□□□ 0.21
MRPL55-213ENST00000366740 COL23A1Q86Y22 540 aaPredicted RBP16.39■□□□□ 0.21
MRPL55-213ENST00000366740 NBPF4Q96M43 638 aa16.39■□□□□ 0.21
MRPL55-213ENST00000366740 ZNF831Q5JPB2 1677 aa16.39■□□□□ 0.21
MRPL55-213ENST00000366740 KIF24Q5T7B8 1368 aa16.38■□□□□ 0.21
MRPL55-213ENST00000366740 GIGYF1O75420 1035 aaPredicted RBP16.38■□□□□ 0.21
MRPL55-213ENST00000366740 YBX3P16989 372 aaKnown RBP eCLIP16.38■□□□□ 0.212e-6■□□□□ 10.7
MRPL55-213ENST00000366740 PELP1Q8IZL8 1130 aaKnown RBP16.38■□□□□ 0.21
MRPL55-213ENST00000366740 COL5A3P25940 1745 aaPredicted RBP16.38■□□□□ 0.21
MRPL55-213ENST00000366740 INSRP06213 1382 aa16.38■□□□□ 0.21
MRPL55-213ENST00000366740 NCAPD2Q15021 1401 aa16.37■□□□□ 0.21
MRPL55-213ENST00000366740 RRS1Q15050 365 aaKnown RBP16.37■□□□□ 0.21
MRPL55-213ENST00000366740 N4BP2Q86UW6 1770 aaPredicted RBP16.36■□□□□ 0.21
MRPL55-213ENST00000366740 VIRMAQ69YN4 1812 aaKnown RBP16.36■□□□□ 0.21
MRPL55-213ENST00000366740 FYB1O15117 783 aa16.36■□□□□ 0.21
MRPL55-213ENST00000366740 GRIN3BO60391 1043 aa16.36■□□□□ 0.21
MRPL55-213ENST00000366740 CICQ96RK0 1608 aaPredicted RBP16.36■□□□□ 0.21
MRPL55-213ENST00000366740 PCDH11XQ9BZA7 1347 aa16.36■□□□□ 0.21
MRPL55-213ENST00000366740 PCDH11YQ9BZA8 1340 aa16.36■□□□□ 0.21
MRPL55-213ENST00000366740 FLT4P35916 1363 aa16.36■□□□□ 0.21
MRPL55-213ENST00000366740 USHBP1Q8N6Y0 703 aa16.35■□□□□ 0.21
MRPL55-213ENST00000366740 RAPGEF4Q8WZA2 1011 aa16.35■□□□□ 0.21
MRPL55-213ENST00000366740 CLSPNQ9HAW4 1339 aa16.35■□□□□ 0.21
MRPL55-213ENST00000366740 PALLDQ8WX93 1383 aa16.35■□□□□ 0.21
MRPL55-213ENST00000366740 TATP17735 454 aaPredicted RBP16.34■□□□□ 0.21
MRPL55-213ENST00000366740 ADCY9O60503 1353 aa16.34■□□□□ 0.21
MRPL55-213ENST00000366740 C4AP0C0L4 1744 aa16.33■□□□□ 0.21
MRPL55-213ENST00000366740 CEP350Q5VT06 3117 aa16.33■□□□□ 0.21
MRPL55-213ENST00000366740 MSH5O43196 834 aa16.33■□□□□ 0.2
MRPL55-213ENST00000366740 HMGB2P26583 209 aaKnown RBP16.33■□□□□ 0.2
MRPL55-213ENST00000366740 GGNBP2Q9H3C7 697 aa16.33■□□□□ 0.2
MRPL55-213ENST00000366740 ATP10DQ9P241 1426 aa16.33■□□□□ 0.2
MRPL55-213ENST00000366740 ARFGEF1Q9Y6D6 1849 aa16.33■□□□□ 0.2
MRPL55-213ENST00000366740 MSL1Q68DK7 614 aa16.32■□□□□ 0.2
MRPL55-213ENST00000366740 FLAD1Q8NFF5 587 aa16.32■□□□□ 0.2
MRPL55-213ENST00000366740 NSD3Q9BZ95 1437 aa16.32■□□□□ 0.2
MRPL55-213ENST00000366740 CD2APQ9Y5K6 639 aa16.32■□□□□ 0.2
MRPL55-213ENST00000366740 CYP27B1O15528 508 aa16.31■□□□□ 0.2
MRPL55-213ENST00000366740 HSP90AB2PQ58FF8 381 aa16.31■□□□□ 0.2
MRPL55-213ENST00000366740 TIMELESSQ9UNS1 1208 aa16.31■□□□□ 0.2
MRPL55-213ENST00000366740 MYH14Q7Z406 1995 aaKnown RBP16.3■□□□□ 0.2
MRPL55-213ENST00000366740 CCER1Q8TC90 406 aaPredicted RBP16.3■□□□□ 0.2
MRPL55-213ENST00000366740 TMF1P82094 1093 aa16.29■□□□□ 0.2
MRPL55-213ENST00000366740 MPRIPQ6WCQ1 1025 aa16.28■□□□□ 0.2
MRPL55-213ENST00000366740 AMIGO3Q86WK7 504 aa16.27■□□□□ 0.2
MRPL55-213ENST00000366740 SMARCC1Q92922 1105 aaPredicted RBP16.27■□□□□ 0.2
MRPL55-213ENST00000366740 NKX1-1Q15270 411 aaPredicted RBP16.26■□□□□ 0.19
MRPL55-213ENST00000366740 SCN11AQ9UI33 1791 aa16.26■□□□□ 0.19
MRPL55-213ENST00000366740 SBF1O95248 1867 aa16.25■□□□□ 0.19
MRPL55-213ENST00000366740 AK7Q96M32 723 aa16.25■□□□□ 0.19
MRPL55-213ENST00000366740 EMILIN1Q9Y6C2 1016 aa16.25■□□□□ 0.19
MRPL55-213ENST00000366740 SSFA2P28290 1259 aa16.24■□□□□ 0.19
MRPL55-213ENST00000366740 PIGBQ92521 554 aa16.24■□□□□ 0.19
MRPL55-213ENST00000366740 PLEKHG2Q9H7P9 1386 aa16.24■□□□□ 0.19
MRPL55-213ENST00000366740 IGSF1Q8N6C5 1336 aa16.23■□□□□ 0.19
MRPL55-213ENST00000366740 CDCA8Q53HL2 280 aa16.23■□□□□ 0.19
MRPL55-213ENST00000366740 CARD14Q9BXL6 1004 aa16.23■□□□□ 0.19
MRPL55-213ENST00000366740 TJP1Q07157 1748 aa16.22■□□□□ 0.19
MRPL55-213ENST00000366740 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.22■□□□□ 0.19
MRPL55-213ENST00000366740 IFFO2Q5TF58 517 aa16.22■□□□□ 0.19
MRPL55-213ENST00000366740 GPBP1L1Q9HC44 474 aaPredicted RBP16.22■□□□□ 0.19
MRPL55-213ENST00000366740 WASHC2AQ641Q2 1341 aa16.21■□□□□ 0.19
MRPL55-213ENST00000366740 LOC102724428A0A0B4J2F2 783 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms