RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 TFCP2L1Q9NZI6 479 aa11.46□□□□□ -0.57
MRPL55-211ENST00000366738 GRIN3BO60391 1043 aa11.45□□□□□ -0.58
MRPL55-211ENST00000366738 HSPA5P11021 654 aaKnown RBP11.45□□□□□ -0.58
MRPL55-211ENST00000366738 HSPA6P17066 643 aa11.45□□□□□ -0.58
MRPL55-211ENST00000366738 SLC27A3Q5K4L6 730 aa11.45□□□□□ -0.58
MRPL55-211ENST00000366738 ZNF526Q8TF50 670 aaPredicted RBP11.45□□□□□ -0.58
MRPL55-211ENST00000366738 DOT1LQ8TEK3 1739 aa11.44□□□□□ -0.58
MRPL55-211ENST00000366738 MSL1Q68DK7 614 aa11.44□□□□□ -0.58
MRPL55-211ENST00000366738 GPBP1L1Q9HC44 474 aaPredicted RBP11.44□□□□□ -0.58
MRPL55-211ENST00000366738 LY75O60449 1722 aa11.43□□□□□ -0.58
MRPL55-211ENST00000366738 A0A1W2PP64 1363 aa11.43□□□□□ -0.58
MRPL55-211ENST00000366738 ADCY9O60503 1353 aa11.43□□□□□ -0.58
MRPL55-211ENST00000366738 ANKRD24Q8TF21 1146 aa11.43□□□□□ -0.58
MRPL55-211ENST00000366738 SYTL4Q96C24 671 aaPredicted RBP11.43□□□□□ -0.58
MRPL55-211ENST00000366738 TESK2Q96S53 571 aa11.43□□□□□ -0.58
MRPL55-211ENST00000366738 NSD2O96028 1365 aa11.42□□□□□ -0.58
MRPL55-211ENST00000366738 ST20-MTHFSA0A0A6YYL1 179 aa11.42□□□□□ -0.58
MRPL55-211ENST00000366738 MSH5O43196 834 aa11.42□□□□□ -0.58
MRPL55-211ENST00000366738 EIF4G2P78344 907 aaKnown RBP eCLIP11.42□□□□□ -0.58
MRPL55-211ENST00000366738 DDX54Q8TDD1 881 aaKnown RBP11.42□□□□□ -0.58
MRPL55-211ENST00000366738 TMC1Q8TDI8 760 aa11.42□□□□□ -0.58
MRPL55-211ENST00000366738 COL23A1Q86Y22 540 aaPredicted RBP11.41□□□□□ -0.58
MRPL55-211ENST00000366738 EDC4Q6P2E9 1401 aaKnown RBP11.41□□□□□ -0.58
MRPL55-211ENST00000366738 PRIM1P49642 420 aaKnown RBP11.4□□□□□ -0.58
MRPL55-211ENST00000366738 CCNL1Q9UK58 526 aaPredicted RBP11.4□□□□□ -0.58
MRPL55-211ENST00000366738 WWC3Q9ULE0 1092 aa11.4□□□□□ -0.58
MRPL55-211ENST00000366738 ANKRD36BQ8N2N9 1353 aa11.4□□□□□ -0.59
MRPL55-211ENST00000366738 FBLN1P23142 703 aa11.39□□□□□ -0.59
MRPL55-211ENST00000366738 HDGFL2Q7Z4V5 671 aaPredicted RBP11.38□□□□□ -0.59
MRPL55-211ENST00000366738 LTV1Q96GA3 475 aaPredicted RBP11.38□□□□□ -0.59
MRPL55-211ENST00000366738 PUS7Q96PZ0 661 aaKnown RBP11.38□□□□□ -0.59
MRPL55-211ENST00000366738 C5P01031 1676 aa11.37□□□□□ -0.59
MRPL55-211ENST00000366738 FAM208AQ9UK61 1670 aaKnown RBP11.37□□□□□ -0.59
MRPL55-211ENST00000366738 MEGF6O75095 1541 aa11.36□□□□□ -0.59
MRPL55-211ENST00000366738 TERF2IPQ9NYB0 399 aa11.36□□□□□ -0.59
MRPL55-211ENST00000366738 RGPD2P0DJD1 1756 aa11.36□□□□□ -0.59
MRPL55-211ENST00000366738 KIF3CO14782 793 aa11.35□□□□□ -0.59
MRPL55-211ENST00000366738 IP6K1Q92551 441 aa11.35□□□□□ -0.59
MRPL55-211ENST00000366738 CD2APQ9Y5K6 639 aa11.35□□□□□ -0.59
MRPL55-211ENST00000366738 MAP3K19Q56UN5 1328 aa11.35□□□□□ -0.59
MRPL55-211ENST00000366738 TOGARAM1Q9Y4F4 1720 aa11.34□□□□□ -0.59
MRPL55-211ENST00000366738 IGSF1Q8N6C5 1336 aa11.34□□□□□ -0.59
MRPL55-211ENST00000366738 TAF1LQ8IZX4 1826 aa11.33□□□□□ -0.6
MRPL55-211ENST00000366738 KIF7Q2M1P5 1343 aa11.33□□□□□ -0.6
MRPL55-211ENST00000366738 WASHC2AQ641Q2 1341 aa11.33□□□□□ -0.6
MRPL55-211ENST00000366738 HOXC9P31274 260 aa11.32□□□□□ -0.6
MRPL55-211ENST00000366738 SMIM5Q71RC9 77 aa11.32□□□□□ -0.6
MRPL55-211ENST00000366738 AMIGO3Q86WK7 504 aa11.32□□□□□ -0.6
MRPL55-211ENST00000366738 ZCRB1Q8TBF4 217 aaKnown RBP11.32□□□□□ -0.6
MRPL55-211ENST00000366738 FYB1O15117 783 aa11.31□□□□□ -0.6
MRPL55-211ENST00000366738 APLP1P51693 650 aa11.31□□□□□ -0.6
MRPL55-211ENST00000366738 TMF1P82094 1093 aa11.31□□□□□ -0.6
MRPL55-211ENST00000366738 RRS1Q15050 365 aaKnown RBP11.31□□□□□ -0.6
MRPL55-211ENST00000366738 COG3Q96JB2 828 aa11.31□□□□□ -0.6
MRPL55-211ENST00000366738 C4BP0C0L5 1744 aa11.31□□□□□ -0.6
MRPL55-211ENST00000366738 CICQ96RK0 1608 aaPredicted RBP11.31□□□□□ -0.6
MRPL55-211ENST00000366738 PALLDQ8WX93 1383 aa11.3□□□□□ -0.6
MRPL55-211ENST00000366738 ZNF316A6NFI3 1004 aaPredicted RBP11.3□□□□□ -0.6
MRPL55-211ENST00000366738 CAPN15O75808 1086 aa11.3□□□□□ -0.6
MRPL55-211ENST00000366738 DNAJC5GQ8N7S2 189 aa11.3□□□□□ -0.6
MRPL55-211ENST00000366738 GGNBP2Q9H3C7 697 aa11.3□□□□□ -0.6
MRPL55-211ENST00000366738 UBR3Q6ZT12 1888 aa11.29□□□□□ -0.6
MRPL55-211ENST00000366738 PCNTO95613 3336 aa11.29□□□□□ -0.6
MRPL55-211ENST00000366738 PHF14O94880 888 aa11.29□□□□□ -0.6
MRPL55-211ENST00000366738 NBPF6Q5VWK0 638 aa11.29□□□□□ -0.6
MRPL55-211ENST00000366738 USHBP1Q8N6Y0 703 aa11.29□□□□□ -0.6
MRPL55-211ENST00000366738 NBPF4Q96M43 638 aa11.29□□□□□ -0.6
MRPL55-211ENST00000366738 POLR3GLQ9BT43 218 aa11.29□□□□□ -0.6
MRPL55-211ENST00000366738 WDR90Q96KV7 1748 aa11.29□□□□□ -0.6
MRPL55-211ENST00000366738 AMPHP49418 695 aa11.28□□□□□ -0.6
MRPL55-211ENST00000366738 HTRA3P83110 453 aa11.28□□□□□ -0.6
MRPL55-211ENST00000366738 FLAD1Q8NFF5 587 aa11.28□□□□□ -0.6
MRPL55-211ENST00000366738 CARD14Q9BXL6 1004 aa11.28□□□□□ -0.6
MRPL55-211ENST00000366738 COL13A1Q5TAT6 717 aaPredicted RBP11.27□□□□□ -0.61
MRPL55-211ENST00000366738 MPRIPQ6WCQ1 1025 aa11.27□□□□□ -0.61
MRPL55-211ENST00000366738 AK7Q96M32 723 aa11.27□□□□□ -0.61
MRPL55-211ENST00000366738 KIF20BQ96Q89 1820 aa11.27□□□□□ -0.61
MRPL55-211ENST00000366738 KIAA1551Q9HCM1 1747 aa11.26□□□□□ -0.61
MRPL55-211ENST00000366738 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.26□□□□□ -0.61
MRPL55-211ENST00000366738 TOMM70O94826 608 aa11.26□□□□□ -0.61
MRPL55-211ENST00000366738 HSP90AB2PQ58FF8 381 aa11.26□□□□□ -0.61
MRPL55-211ENST00000366738 NMRK2Q9NPI5 230 aa11.26□□□□□ -0.61
MRPL55-211ENST00000366738 RTL1A6NKG5 1358 aa11.26□□□□□ -0.61
MRPL55-211ENST00000366738 ITGB4P16144 1822 aa11.25□□□□□ -0.61
MRPL55-211ENST00000366738 PXDNLA1KZ92 1463 aa11.25□□□□□ -0.61
MRPL55-211ENST00000366738 SLC24A1O60721 1099 aa11.25□□□□□ -0.61
MRPL55-211ENST00000366738 N4BP2Q86UW6 1770 aaPredicted RBP11.25□□□□□ -0.61
MRPL55-211ENST00000366738 RAPGEF4Q8WZA2 1011 aa11.24□□□□□ -0.61
MRPL55-211ENST00000366738 PCDH11XQ9BZA7 1347 aa11.24□□□□□ -0.61
MRPL55-211ENST00000366738 PCDH11YQ9BZA8 1340 aa11.24□□□□□ -0.61
MRPL55-211ENST00000366738 TATP17735 454 aaPredicted RBP11.23□□□□□ -0.61
MRPL55-211ENST00000366738 CDCA8Q53HL2 280 aa11.23□□□□□ -0.61
MRPL55-211ENST00000366738 LINC00116Q8NCU8 138 aa11.23□□□□□ -0.61
MRPL55-211ENST00000366738 KLRG1Q96E93 195 aa11.23□□□□□ -0.61
MRPL55-211ENST00000366738 BCS1LQ9Y276 419 aa11.23□□□□□ -0.61
MRPL55-211ENST00000366738 EMILIN1Q9Y6C2 1016 aa11.23□□□□□ -0.61
MRPL55-211ENST00000366738 CGNL1Q0VF96 1302 aa11.23□□□□□ -0.61
MRPL55-211ENST00000366738 INSRP06213 1382 aa11.23□□□□□ -0.61
MRPL55-211ENST00000366738 NSD3Q9BZ95 1437 aa11.23□□□□□ -0.61
MRPL55-211ENST00000366738 MAP2P11137 1827 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms