RNA–Protein interactions for RNA: ENST00000366197.9

ZNF548-202, Transcript of zinc finger protein 548, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF548, Length 4,955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-202ENST00000366197 KRT18P05783 430 aaKnown RBP12.25□□□□□ -0.45
ZNF548-202ENST00000366197 CEBPZQ03701 1054 aaKnown RBP12.25□□□□□ -0.45
ZNF548-202ENST00000366197 STK3Q13188 491 aa12.25□□□□□ -0.45
ZNF548-202ENST00000366197 CAVIN1Q6NZI2 390 aaKnown RBP12.25□□□□□ -0.45
ZNF548-202ENST00000366197 TMEM57Q8N5G2 664 aa12.25□□□□□ -0.45
ZNF548-202ENST00000366197 PDILTQ8N807 584 aa12.25□□□□□ -0.45
ZNF548-202ENST00000366197 DNAJC5Q9H3Z4 198 aa12.25□□□□□ -0.45
ZNF548-202ENST00000366197 EXOC6BQ9Y2D4 811 aa12.25□□□□□ -0.45
ZNF548-202ENST00000366197 MRE11P49959 708 aa12.25□□□□□ -0.45
ZNF548-202ENST00000366197 SOGA3Q5TF21 947 aa12.25□□□□□ -0.45
ZNF548-202ENST00000366197 NUP133Q8WUM0 1156 aa12.25□□□□□ -0.45
ZNF548-202ENST00000366197 TRIM5Q9C035 493 aa12.25□□□□□ -0.45
ZNF548-202ENST00000366197 ABCF2Q9UG63 623 aa12.25□□□□□ -0.45
ZNF548-202ENST00000366197 ABCC5O15440 1437 aa12.24□□□□□ -0.45
ZNF548-202ENST00000366197 UBAC1Q9BSL1 405 aa12.24□□□□□ -0.45
ZNF548-202ENST00000366197 KRT32Q14532 448 aa12.24□□□□□ -0.45
ZNF548-202ENST00000366197 FILIP1LQ4L180 1135 aa12.24□□□□□ -0.45
ZNF548-202ENST00000366197 AEBP1Q8IUX7 1158 aa12.24□□□□□ -0.45
ZNF548-202ENST00000366197 KIF1BPQ96EK5 621 aa12.24□□□□□ -0.45
ZNF548-202ENST00000366197 EMILIN1Q9Y6C2 1016 aa12.24□□□□□ -0.45
ZNF548-202ENST00000366197 NASPP49321 788 aaPredicted RBP12.24□□□□□ -0.45
ZNF548-202ENST00000366197 CWC27Q6UX04 472 aaKnown RBP12.24□□□□□ -0.45
ZNF548-202ENST00000366197 METTL24Q5JXM2 366 aa12.23□□□□□ -0.45
ZNF548-202ENST00000366197 ZFYVE27Q5T4F4 411 aa12.23□□□□□ -0.45
ZNF548-202ENST00000366197 MNS1Q8NEH6 495 aa12.23□□□□□ -0.45
ZNF548-202ENST00000366197 PIP4K2AP48426 406 aaPredicted RBP12.23□□□□□ -0.45
ZNF548-202ENST00000366197 TMEM132AQ24JP5 1023 aa12.23□□□□□ -0.45
ZNF548-202ENST00000366197 LARP1BQ659C4 914 aaKnown RBP12.23□□□□□ -0.45
ZNF548-202ENST00000366197 CAMSAP2Q08AD1 1489 aa12.23□□□□□ -0.45
ZNF548-202ENST00000366197 WDR33Q9C0J8 1336 aaKnown RBP12.23□□□□□ -0.45
ZNF548-202ENST00000366197 USHBP1Q8N6Y0 703 aa12.23□□□□□ -0.45
ZNF548-202ENST00000366197 ABCC11Q96J66 1382 aa12.23□□□□□ -0.45
ZNF548-202ENST00000366197 ZPR1O75312 459 aa12.22□□□□□ -0.45
ZNF548-202ENST00000366197 KRT85P78386 507 aa12.22□□□□□ -0.45
ZNF548-202ENST00000366197 MPRIPQ6WCQ1 1025 aa12.22□□□□□ -0.45
ZNF548-202ENST00000366197 AKAP2Q9Y2D5 859 aa12.22□□□□□ -0.45
ZNF548-202ENST00000366197 CDKL5O76039 1030 aa12.22□□□□□ -0.45
ZNF548-202ENST00000366197 NCOA1Q15788 1441 aa12.22□□□□□ -0.45
ZNF548-202ENST00000366197 GLRX3O76003 335 aaKnown RBP12.22□□□□□ -0.45
ZNF548-202ENST00000366197 HSP90AA2PQ14568 343 aaPredicted RBP12.22□□□□□ -0.45
ZNF548-202ENST00000366197 SSH1Q8WYL5 1049 aa12.22□□□□□ -0.45
ZNF548-202ENST00000366197 IFIT1P09914 478 aaKnown RBP12.22□□□□□ -0.45
ZNF548-202ENST00000366197 ME1P48163 572 aa12.22□□□□□ -0.45
ZNF548-202ENST00000366197 CCDC173Q0VFZ6 552 aa12.22□□□□□ -0.45
ZNF548-202ENST00000366197 TMOD2Q9NZR1 351 aa12.22□□□□□ -0.45
ZNF548-202ENST00000366197 FAM43AQ8N2R8 423 aa12.21□□□□□ -0.45
ZNF548-202ENST00000366197 AIDAQ96BJ3 306 aa12.21□□□□□ -0.45
ZNF548-202ENST00000366197 BACH2Q9BYV9 841 aa12.21□□□□□ -0.45
ZNF548-202ENST00000366197 K7ELQ4 463 aaPredicted RBP12.21□□□□□ -0.45
ZNF548-202ENST00000366197 EXOC5O00471 708 aa12.21□□□□□ -0.45
ZNF548-202ENST00000366197 ALDH1L2Q3SY69 923 aa12.21□□□□□ -0.45
ZNF548-202ENST00000366197 WWC2Q6AWC2 1192 aa12.21□□□□□ -0.45
ZNF548-202ENST00000366197 JAKMIP1Q96N16 626 aaKnown RBP12.21□□□□□ -0.45
ZNF548-202ENST00000366197 MAGEC2Q9UBF1 373 aaPredicted RBP12.21□□□□□ -0.45
ZNF548-202ENST00000366197 CADPS2Q86UW7 1296 aa12.21□□□□□ -0.45
ZNF548-202ENST00000366197 ZSCAN31Q96LW9 406 aaPredicted RBP12.21□□□□□ -0.45
ZNF548-202ENST00000366197 RSPH6AQ9H0K4 717 aa12.21□□□□□ -0.45
ZNF548-202ENST00000366197 DBF4Q9UBU7 674 aaPredicted RBP12.21□□□□□ -0.46
ZNF548-202ENST00000366197 KRT28Q7Z3Y7 464 aa12.2□□□□□ -0.46
ZNF548-202ENST00000366197 NOL7Q9UMY1 257 aaKnown RBP12.2□□□□□ -0.46
ZNF548-202ENST00000366197 TNRQ92752 1358 aa12.2□□□□□ -0.46
ZNF548-202ENST00000366197 HSP90AB3PQ58FF7 597 aa12.2□□□□□ -0.46
ZNF548-202ENST00000366197 NUTM1Q86Y26 1132 aa12.2□□□□□ -0.46
ZNF548-202ENST00000366197 PDRG1Q9NUG6 133 aa12.2□□□□□ -0.46
ZNF548-202ENST00000366197 RAB11FIP3O75154 756 aa12.2□□□□□ -0.46
ZNF548-202ENST00000366197 SMC2O95347 1197 aa12.2□□□□□ -0.46
ZNF548-202ENST00000366197 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.2□□□□□ -0.46
ZNF548-202ENST00000366197 MYD88Q99836 296 aa12.2□□□□□ -0.46
ZNF548-202ENST00000366197 C14orf93Q9H972 538 aaKnown RBP12.2□□□□□ -0.46
ZNF548-202ENST00000366197 CAVIN4Q5BKX8 364 aa12.19□□□□□ -0.46
ZNF548-202ENST00000366197 RARSP54136 660 aaKnown RBP12.19□□□□□ -0.46
ZNF548-202ENST00000366197 BRPF1P55201 1214 aaPredicted RBP12.19□□□□□ -0.46
ZNF548-202ENST00000366197 IMMTQ16891 758 aaKnown RBP12.19□□□□□ -0.46
ZNF548-202ENST00000366197 ARGLU1Q9NWB6 273 aaPredicted RBP12.19□□□□□ -0.46
ZNF548-202ENST00000366197 WDR97A6NE52 1622 aa12.19□□□□□ -0.46
ZNF548-202ENST00000366197 IFIT5Q13325 482 aaKnown RBP12.19□□□□□ -0.46
ZNF548-202ENST00000366197 SMARCE1Q969G3 411 aa12.19□□□□□ -0.46
ZNF548-202ENST00000366197 RUFY1Q96T51 708 aa12.19□□□□□ -0.46
ZNF548-202ENST00000366197 WDR7Q9Y4E6 1490 aa12.19□□□□□ -0.46
ZNF548-202ENST00000366197 LRPPRCP42704 1394 aaKnown RBP12.19□□□□□ -0.46
ZNF548-202ENST00000366197 STIM1Q13586 685 aa12.19□□□□□ -0.46
ZNF548-202ENST00000366197 DNAAF4Q8WXU2 420 aa12.19□□□□□ -0.46
ZNF548-202ENST00000366197 SPINK5Q9NQ38 1064 aaPredicted RBP12.19□□□□□ -0.46
ZNF548-202ENST00000366197 PDIA4P13667 645 aaKnown RBP12.18□□□□□ -0.46
ZNF548-202ENST00000366197 CDR1P51861 262 aa12.18□□□□□ -0.46
ZNF548-202ENST00000366197 ZHX3Q9H4I2 956 aa12.18□□□□□ -0.46
ZNF548-202ENST00000366197 FAM13BQ9NYF5 915 aa12.18□□□□□ -0.46
ZNF548-202ENST00000366197 CCDC39Q9UFE4 941 aa12.18□□□□□ -0.46
ZNF548-202ENST00000366197 TRMT112Q9UI30 125 aaKnown RBP12.18□□□□□ -0.46
ZNF548-202ENST00000366197 KIF14Q15058 1648 aa12.18□□□□□ -0.46
ZNF548-202ENST00000366197 DHX29Q7Z478 1369 aaKnown RBP12.18□□□□□ -0.46
ZNF548-202ENST00000366197 MX1P20591 662 aa12.18□□□□□ -0.46
ZNF548-202ENST00000366197 TSPY26PQ9H489 355 aa12.18□□□□□ -0.46
ZNF548-202ENST00000366197 ZNF287Q9HBT7 754 aa12.18□□□□□ -0.46
ZNF548-202ENST00000366197 ATP10BO94823 1461 aa12.18□□□□□ -0.46
ZNF548-202ENST00000366197 HYPKQ9NX55 129 aa12.18□□□□□ -0.46
ZNF548-202ENST00000366197 U3KPZ7 1027 aaPredicted RBP12.18□□□□□ -0.46
ZNF548-202ENST00000366197 C11orf95C9JLR9 678 aaPredicted RBP12.18□□□□□ -0.46
ZNF548-202ENST00000366197 BMP2KQ9NSY1 1161 aaPredicted RBP12.18□□□□□ -0.46
ZNF548-202ENST00000366197 WDR62O43379 1518 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms