RNA–Protein interactions for RNA: ENST00000362942.1

RNU6-428P-201, Transcript of RNA, U6 small nuclear 428, pseudogene, humanhuman

BASIC

Gene RNU6-428P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-428P-201ENST00000362942 Q6ZVU0 165 aa5.2□□□□□ -1.58
RNU6-428P-201ENST00000362942 CCDC82Q8N4S0 544 aa5.2□□□□□ -1.58
RNU6-428P-201ENST00000362942 TSEN34Q9BSV6 310 aaKnown RBP5.2□□□□□ -1.58
RNU6-428P-201ENST00000362942 VRTNQ9H8Y1 702 aa5.2□□□□□ -1.58
RNU6-428P-201ENST00000362942 MAFBQ9Y5Q3 323 aaPredicted RBP5.2□□□□□ -1.58
RNU6-428P-201ENST00000362942 PPP1R15AO75807 674 aaPredicted RBP5.19□□□□□ -1.58
RNU6-428P-201ENST00000362942 GNRH1P01148 92 aa5.19□□□□□ -1.58
RNU6-428P-201ENST00000362942 ADH1AP07327 375 aa5.19□□□□□ -1.58
RNU6-428P-201ENST00000362942 LARP1Q6PKG0 1096 aaKnown RBP5.19□□□□□ -1.58
RNU6-428P-201ENST00000362942 MEIOBQ8N635 442 aa5.19□□□□□ -1.58
RNU6-428P-201ENST00000362942 KLF16Q9BXK1 252 aaPredicted RBP5.19□□□□□ -1.58
RNU6-428P-201ENST00000362942 ZFAND3Q9H8U3 227 aa5.19□□□□□ -1.58
RNU6-428P-201ENST00000362942 MKRN1Q9UHC7 482 aaKnown RBP5.19□□□□□ -1.58
RNU6-428P-201ENST00000362942 ACIN1Q9UKV3 1341 aaKnown RBP5.19□□□□□ -1.58
RNU6-428P-201ENST00000362942 LILRA1O75019 489 aa5.18□□□□□ -1.58
RNU6-428P-201ENST00000362942 PSME1Q06323 249 aa5.18□□□□□ -1.58
RNU6-428P-201ENST00000362942 CDCA7Q9BWT1 371 aaPredicted RBP5.18□□□□□ -1.58
RNU6-428P-201ENST00000362942 BMP2P12643 396 aa5.17□□□□□ -1.58
RNU6-428P-201ENST00000362942 RFX1P22670 979 aa5.17□□□□□ -1.58
RNU6-428P-201ENST00000362942 GTF2E1P29083 439 aaPredicted RBP5.17□□□□□ -1.58
RNU6-428P-201ENST00000362942 PTGIRP43119 386 aa5.17□□□□□ -1.58
RNU6-428P-201ENST00000362942 GTF2IP78347 998 aa5.17□□□□□ -1.58
RNU6-428P-201ENST00000362942 CBLBQ13191 982 aa5.17□□□□□ -1.58
RNU6-428P-201ENST00000362942 CFAP70Q5T0N1 1121 aa5.17□□□□□ -1.58
RNU6-428P-201ENST00000362942 MRPL14Q6P1L8 145 aaKnown RBP5.17□□□□□ -1.58
RNU6-428P-201ENST00000362942 LINC00528Q8N1L1 170 aa5.17□□□□□ -1.58
RNU6-428P-201ENST00000362942 DEPDC4Q8N2C3 294 aa5.17□□□□□ -1.58
RNU6-428P-201ENST00000362942 LARGE2Q8N3Y3 721 aa5.17□□□□□ -1.58
RNU6-428P-201ENST00000362942 KIFC2Q96AC6 838 aa5.17□□□□□ -1.58
RNU6-428P-201ENST00000362942 PBXIP1Q96AQ6 731 aa5.17□□□□□ -1.58
RNU6-428P-201ENST00000362942 NLRP3Q96P20 1036 aa5.17□□□□□ -1.58
RNU6-428P-201ENST00000362942 OSBPL3Q9H4L5 887 aa5.17□□□□□ -1.58
RNU6-428P-201ENST00000362942 SENP2Q9HC62 589 aa5.17□□□□□ -1.58
RNU6-428P-201ENST00000362942 AAASQ9NRG9 546 aa5.17□□□□□ -1.58
RNU6-428P-201ENST00000362942 FAM196BA6NMK8 535 aa5.16□□□□□ -1.58
RNU6-428P-201ENST00000362942 BACH1O14867 736 aa5.16□□□□□ -1.58
RNU6-428P-201ENST00000362942 RASA1P20936 1047 aa5.16□□□□□ -1.58
RNU6-428P-201ENST00000362942 SCTRP47872 440 aa5.16□□□□□ -1.58
RNU6-428P-201ENST00000362942 TSGA10IPQ3SY00 556 aa5.16□□□□□ -1.58
RNU6-428P-201ENST00000362942 ARID3AQ99856 593 aa5.16□□□□□ -1.58
RNU6-428P-201ENST00000362942 DNAAF2Q9NVR5 837 aaKnown RBP5.16□□□□□ -1.58
RNU6-428P-201ENST00000362942 GPC1P35052 558 aa5.15□□□□□ -1.59
RNU6-428P-201ENST00000362942 ADD1P35611 737 aaKnown RBP5.15□□□□□ -1.59
RNU6-428P-201ENST00000362942 RELBQ01201 579 aa5.15□□□□□ -1.59
RNU6-428P-201ENST00000362942 PDE4CQ08493 712 aa5.15□□□□□ -1.59
RNU6-428P-201ENST00000362942 OGFOD1Q8N543 542 aa5.15□□□□□ -1.59
RNU6-428P-201ENST00000362942 C1orf115Q9H7X2 142 aa5.15□□□□□ -1.59
RNU6-428P-201ENST00000362942 ATP13A2Q9NQ11 1180 aa5.15□□□□□ -1.59
RNU6-428P-201ENST00000362942 WASLO00401 505 aaPredicted RBP5.14□□□□□ -1.59
RNU6-428P-201ENST00000362942 SPINT1O43278 529 aa5.14□□□□□ -1.59
RNU6-428P-201ENST00000362942 CLN3Q13286 438 aa5.14□□□□□ -1.59
RNU6-428P-201ENST00000362942 C6orf118Q5T5N4 469 aa5.14□□□□□ -1.59
RNU6-428P-201ENST00000362942 KANK4Q5T7N3 995 aaPredicted RBP5.14□□□□□ -1.59
RNU6-428P-201ENST00000362942 CCDC102BQ68D86 513 aa5.14□□□□□ -1.59
RNU6-428P-201ENST00000362942 ARHGEF10LQ9HCE6 1279 aa5.14□□□□□ -1.59
RNU6-428P-201ENST00000362942 POLMQ9NP87 494 aaPredicted RBP5.14□□□□□ -1.59
RNU6-428P-201ENST00000362942 PCDHGA11Q9Y5H2 935 aa5.14□□□□□ -1.59
RNU6-428P-201ENST00000362942 A0A1W2PRU2 124 aa5.13□□□□□ -1.59
RNU6-428P-201ENST00000362942 USP17L15C9J2P7 530 aa5.13□□□□□ -1.59
RNU6-428P-201ENST00000362942 USP17L10C9JJH3 530 aa5.13□□□□□ -1.59
RNU6-428P-201ENST00000362942 USP17L13C9JLJ4 530 aa5.13□□□□□ -1.59
RNU6-428P-201ENST00000362942 USP17L12C9JPN9 530 aa5.13□□□□□ -1.59
RNU6-428P-201ENST00000362942 USP17L11C9JVI0 530 aa5.13□□□□□ -1.59
RNU6-428P-201ENST00000362942 USP17L21D6R901 530 aa5.13□□□□□ -1.59
RNU6-428P-201ENST00000362942 USP17L18D6R9N7 530 aa5.13□□□□□ -1.59
RNU6-428P-201ENST00000362942 USP17L22D6RA61 530 aa5.13□□□□□ -1.59
RNU6-428P-201ENST00000362942 USP17L17D6RBQ6 530 aa5.13□□□□□ -1.59
RNU6-428P-201ENST00000362942 USP17L19D6RCP7 530 aa5.13□□□□□ -1.59
RNU6-428P-201ENST00000362942 USP17L20D6RJB6 530 aa5.13□□□□□ -1.59
RNU6-428P-201ENST00000362942 M0R2N6 131 aa5.13□□□□□ -1.59
RNU6-428P-201ENST00000362942 MEN1O00255 615 aa5.13□□□□□ -1.59
RNU6-428P-201ENST00000362942 ST8SIA5O15466 376 aa5.13□□□□□ -1.59
RNU6-428P-201ENST00000362942 ATG7O95352 703 aa5.13□□□□□ -1.59
RNU6-428P-201ENST00000362942 INHAP05111 366 aa5.13□□□□□ -1.59
RNU6-428P-201ENST00000362942 GDF10P55107 478 aa5.13□□□□□ -1.59
RNU6-428P-201ENST00000362942 USP17L24Q0WX57 530 aa5.13□□□□□ -1.59
RNU6-428P-201ENST00000362942 ELOAQ14241 798 aaKnown RBP5.13□□□□□ -1.59
RNU6-428P-201ENST00000362942 SLC27A3Q5K4L6 730 aa5.13□□□□□ -1.59
RNU6-428P-201ENST00000362942 SIX5Q8N196 739 aa5.13□□□□□ -1.59
RNU6-428P-201ENST00000362942 TPCN2Q8NHX9 752 aa5.13□□□□□ -1.59
RNU6-428P-201ENST00000362942 AGBL1Q96MI9 1066 aa5.13□□□□□ -1.59
RNU6-428P-201ENST00000362942 PURBQ96QR8 312 aaKnown RBP5.13□□□□□ -1.59
RNU6-428P-201ENST00000362942 ESYT1Q9BSJ8 1104 aa5.13□□□□□ -1.59
RNU6-428P-201ENST00000362942 ZNF395Q9H8N7 513 aaPredicted RBP5.13□□□□□ -1.59
RNU6-428P-201ENST00000362942 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.12□□□□□ -1.59
RNU6-428P-201ENST00000362942 TTLL8A6PVC2 850 aa5.12□□□□□ -1.59
RNU6-428P-201ENST00000362942 CSB-PGBD3P0DP91 1061 aa5.12□□□□□ -1.59
RNU6-428P-201ENST00000362942 BMP1P13497 986 aa5.12□□□□□ -1.59
RNU6-428P-201ENST00000362942 SEC13P55735 322 aa5.12□□□□□ -1.59
RNU6-428P-201ENST00000362942 ANKMY2Q8IV38 441 aa5.12□□□□□ -1.59
RNU6-428P-201ENST00000362942 NBPF15Q8N660 670 aa5.12□□□□□ -1.59
RNU6-428P-201ENST00000362942 FAM200AQ8TCP9 573 aa5.12□□□□□ -1.59
RNU6-428P-201ENST00000362942 CNKSR1Q969H4 720 aa5.12□□□□□ -1.59
RNU6-428P-201ENST00000362942 XAGE2Q96GT9 111 aa5.12□□□□□ -1.59
RNU6-428P-201ENST00000362942 ZNF594Q96JF6 807 aaPredicted RBP5.12□□□□□ -1.59
RNU6-428P-201ENST00000362942 ZFP42Q96MM3 310 aa5.12□□□□□ -1.59
RNU6-428P-201ENST00000362942 ETNK1Q9HBU6 452 aa5.12□□□□□ -1.59
RNU6-428P-201ENST00000362942 CHMP3Q9Y3E7 222 aa5.12□□□□□ -1.59
RNU6-428P-201ENST00000362942 RNF144AP50876 292 aaPredicted RBP5.11□□□□□ -1.59
RNU6-428P-201ENST00000362942 CLDN10P78369 228 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms