RNA–Protein interactions for RNA: ENST00000362552.1

VTRNA3-1P-201, Transcript of vault RNA 3-1, pseudogene, humanhuman

BASIC

Gene VTRNA3-1P, Length 102 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTRNA3-1P-201ENST00000362552 HSP90AB1P08238 724 aaKnown RBP8.72□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 CCDC146Q8IYE0 955 aa8.72□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 IFNL2Q8IZJ0 200 aa8.72□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 RTF1Q92541 710 aaKnown RBP8.72□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 RSPH6AQ9H0K4 717 aa8.72□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 LMO7Q8WWI1 1683 aa8.72□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 PEAK1Q9H792 1746 aa8.71□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 NWD2Q9ULI1 1742 aa8.71□□□□□ -1.01
VTRNA3-1P-201ENST00000362552 ZNF530Q6P9A1 599 aaPredicted RBP8.71□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 COL3A1P02461 1466 aaPredicted RBP8.7□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 RIPK4P57078 832 aa8.7□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 LMOD3Q0VAK6 560 aa8.7□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 NEUROD2Q15784 382 aa8.7□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 MTHFSDQ2M296 383 aaKnown RBP8.7□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 AKAP4Q5JQC9 854 aa8.7□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 KRT27Q7Z3Y8 459 aa8.7□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 PCDH11XQ9BZA7 1347 aa8.7□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 PCDH11YQ9BZA8 1340 aa8.7□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 KDRP35968 1356 aa8.7□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 PLCH1Q4KWH8 1693 aa8.69□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 GNAT3A8MTJ3 354 aa8.69□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 APAF1O14727 1248 aa8.69□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 HTATSF1O43719 755 aaKnown RBP8.69□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 NFE2L2Q16236 605 aa8.69□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 NGEFQ8N5V2 710 aa8.69□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 PHACTR3Q96KR7 559 aa8.69□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 PLEKHF1Q96S99 279 aa8.69□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 PHKG2P15735 406 aa8.68□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 TMPOP42166 694 aaKnown RBP8.68□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 FAM196AQ6ZSG2 479 aa8.68□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 PLEKHG2Q9H7P9 1386 aa8.68□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 RGPD5Q99666 1765 aa8.68□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 OVOS2A0A0G2JMS6 1433 aa8.67□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 CALD1Q05682 793 aaKnown RBP8.67□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 DCAF5Q96JK2 942 aa8.67□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 FAM208AQ9UK61 1670 aaKnown RBP8.67□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 SALL2Q9Y467 1007 aaPredicted RBP8.67□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 NRAPQ86VF7 1730 aa8.66□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.66□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 NCAPD2Q15021 1401 aa8.66□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 CYP27B1O15528 508 aa8.66□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 CABP4P57796 275 aa8.66□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 TEFQ10587 303 aa8.66□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 NKX1-1Q15270 411 aaPredicted RBP8.66□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 NCBP3Q53F19 620 aaKnown RBP8.66□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 MPRIPQ6WCQ1 1025 aa8.66□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 MARCH10Q8NA82 808 aaPredicted RBP8.66□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 SYTL4Q96C24 671 aaPredicted RBP8.66□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 RRP7AQ9Y3A4 280 aaKnown RBP8.66□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 MEGF6O75095 1541 aa8.65□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 DISP2A7MBM2 1401 aa8.65□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 ERVV-2B6SEH9 535 aa8.65□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 RNMTO43148 476 aaKnown RBP8.65□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 HNRNPUQ00839 825 aaKnown RBP eCLIP8.65□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 SF3B2Q13435 895 aaKnown RBP8.65□□□□□ -1.02
VTRNA3-1P-201ENST00000362552 MAP3K5Q99683 1374 aa8.64□□□□□ -1.03
VTRNA3-1P-201ENST00000362552 CCDC27Q2M243 656 aa8.64□□□□□ -1.03
VTRNA3-1P-201ENST00000362552 ACSBG1Q96GR2 724 aa8.64□□□□□ -1.03
VTRNA3-1P-201ENST00000362552 TMOD3Q9NYL9 352 aa8.64□□□□□ -1.03
VTRNA3-1P-201ENST00000362552 LAS1LQ9Y4W2 734 aaKnown RBP8.64□□□□□ -1.03
VTRNA3-1P-201ENST00000362552 TNS2Q63HR2 1409 aa8.63□□□□□ -1.03
VTRNA3-1P-201ENST00000362552 SENP3-EIF4A1A0A087X0R7 540 aa8.63□□□□□ -1.03
VTRNA3-1P-201ENST00000362552 HMGB2P26583 209 aaKnown RBP8.63□□□□□ -1.03
VTRNA3-1P-201ENST00000362552 PRIM1P49642 420 aaKnown RBP8.63□□□□□ -1.03
VTRNA3-1P-201ENST00000362552 TAF7Q15545 349 aaPredicted RBP8.63□□□□□ -1.03
VTRNA3-1P-201ENST00000362552 FAM182BQ5T319 152 aa8.63□□□□□ -1.03
VTRNA3-1P-201ENST00000362552 MCM10Q7L590 875 aa8.63□□□□□ -1.03
VTRNA3-1P-201ENST00000362552 IL17REQ8NFR9 667 aa8.63□□□□□ -1.03
VTRNA3-1P-201ENST00000362552 LGR6Q9HBX8 967 aa8.63□□□□□ -1.03
VTRNA3-1P-201ENST00000362552 GLI3P10071 1580 aa8.63□□□□□ -1.03
VTRNA3-1P-201ENST00000362552 BTBD11A6QL63 1104 aa8.62□□□□□ -1.03
VTRNA3-1P-201ENST00000362552 DCTN1Q14203 1278 aa8.62□□□□□ -1.03
VTRNA3-1P-201ENST00000362552 WDR63Q8IWG1 891 aa8.62□□□□□ -1.03
VTRNA3-1P-201ENST00000362552 TTC5Q8N0Z6 440 aa8.62□□□□□ -1.03
VTRNA3-1P-201ENST00000362552 NFATC2IPQ8NCF5 419 aa8.62□□□□□ -1.03
VTRNA3-1P-201ENST00000362552 SMARCC1Q92922 1105 aaPredicted RBP8.62□□□□□ -1.03
VTRNA3-1P-201ENST00000362552 SLC52A2Q9HAB3 445 aa8.62□□□□□ -1.03
VTRNA3-1P-201ENST00000362552 RGPD1P0DJD0 1748 aa8.62□□□□□ -1.03
VTRNA3-1P-201ENST00000362552 RGPD2P0DJD1 1756 aa8.61□□□□□ -1.03
VTRNA3-1P-201ENST00000362552 TRIM37O94972 964 aa8.61□□□□□ -1.03
VTRNA3-1P-201ENST00000362552 GNAI1P63096 354 aa8.61□□□□□ -1.03
VTRNA3-1P-201ENST00000362552 CCDC125Q86Z20 511 aa8.61□□□□□ -1.03
VTRNA3-1P-201ENST00000362552 WWC1Q8IX03 1113 aa8.61□□□□□ -1.03
VTRNA3-1P-201ENST00000362552 YTHDC1Q96MU7 727 aaKnown RBP8.61□□□□□ -1.03
VTRNA3-1P-201ENST00000362552 BCL11BQ9C0K0 894 aaPredicted RBP8.61□□□□□ -1.03
VTRNA3-1P-201ENST00000362552 BABAM1Q9NWV8 329 aa8.61□□□□□ -1.03
VTRNA3-1P-201ENST00000362552 TRIM35Q9UPQ4 493 aa8.61□□□□□ -1.03
VTRNA3-1P-201ENST00000362552 RGS12O14924 1447 aa8.61□□□□□ -1.03
VTRNA3-1P-201ENST00000362552 PARP4Q9UKK3 1724 aaKnown RBP8.6□□□□□ -1.03
VTRNA3-1P-201ENST00000362552 APBA3O96018 575 aa8.6□□□□□ -1.03
VTRNA3-1P-201ENST00000362552 GOLGA2Q08379 1002 aa8.6□□□□□ -1.03
VTRNA3-1P-201ENST00000362552 MYH16Q9H6N6 1097 aa8.6□□□□□ -1.03
VTRNA3-1P-201ENST00000362552 TSPYL4Q9UJ04 414 aa8.6□□□□□ -1.03
VTRNA3-1P-201ENST00000362552 KCNQ2O43526 872 aa8.59□□□□□ -1.03
VTRNA3-1P-201ENST00000362552 PIGBQ92521 554 aa8.59□□□□□ -1.03
VTRNA3-1P-201ENST00000362552 CFAP44Q96MT7 982 aa8.59□□□□□ -1.03
VTRNA3-1P-201ENST00000362552 THUMPD2Q9BTF0 503 aaKnown RBP8.59□□□□□ -1.03
VTRNA3-1P-201ENST00000362552 CHMP4AQ9BY43 222 aa8.59□□□□□ -1.03
VTRNA3-1P-201ENST00000362552 IFT57Q9NWB7 429 aa8.59□□□□□ -1.03
VTRNA3-1P-201ENST00000362552 IL16Q14005 1332 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms